RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 DNAH6Q9C0G6 4158 aa7.08□□□□□ -1.28
USP46-204ENST00000503060 HECTD4Q9Y4D8 3996 aa7.08□□□□□ -1.28
USP46-204ENST00000503060 IGKV4-1P06312 121 aa7.07□□□□□ -1.28
USP46-204ENST00000503060 Q8N9L7 120 aa7.07□□□□□ -1.28
USP46-204ENST00000503060 C8orf17Q9NRJ1 99 aa7.07□□□□□ -1.28
USP46-204ENST00000503060 C1orf64Q8NEQ6 169 aa7.06□□□□□ -1.28
USP46-204ENST00000503060 PSORS1C2Q9UIG4 136 aa7.05□□□□□ -1.28
USP46-204ENST00000503060 ALMS1Q8TCU4 4167 aa7.05□□□□□ -1.28
USP46-204ENST00000503060 LUZP6Q538Z0 58 aa7.04□□□□□ -1.28
USP46-204ENST00000503060 TGP01266 2768 aa7.03□□□□□ -1.28
USP46-204ENST00000503060 LOC101927531A0A1B0GV80 90 aa7.02□□□□□ -1.28
USP46-204ENST00000503060 A0A087WSZ3 146 aa7.02□□□□□ -1.29
USP46-204ENST00000503060 DSCR10P59022 87 aa7.01□□□□□ -1.29
USP46-204ENST00000503060 KRTAP10-2P60368 255 aa7.01□□□□□ -1.29
USP46-204ENST00000503060 PRR4Q16378 134 aa7□□□□□ -1.29
USP46-204ENST00000503060 LINC00483Q53H64 154 aa7□□□□□ -1.29
USP46-204ENST00000503060 ZNF861PO60384 105 aa6.99□□□□□ -1.29
USP46-204ENST00000503060 SRRM2Q9UQ35 2752 aaKnown RBP6.99□□□□□ -1.29
USP46-204ENST00000503060 A8MWP4 228 aa6.99□□□□□ -1.29
USP46-204ENST00000503060 PRR15LQ9BU68 103 aa6.98□□□□□ -1.29
USP46-204ENST00000503060 DNAH8Q96JB1 4490 aa6.98□□□□□ -1.29
USP46-204ENST00000503060 K7EQZ3 153 aa6.97□□□□□ -1.29
USP46-204ENST00000503060 DNAH11Q96DT5 4516 aa6.96□□□□□ -1.3
USP46-204ENST00000503060 Q8N9P0 234 aaPredicted RBP6.96□□□□□ -1.3
USP46-204ENST00000503060 OCR1Q9BZK8 76 aa6.96□□□□□ -1.3
USP46-204ENST00000503060 DEFB116Q30KQ4 102 aa6.96□□□□□ -1.3
USP46-204ENST00000503060 K7ERS5 55 aa6.95□□□□□ -1.3
USP46-204ENST00000503060 CIRBP-AS1Q8TBR5 109 aa6.95□□□□□ -1.3
USP46-204ENST00000503060 DNAH5Q8TE73 4624 aa6.95□□□□□ -1.3
USP46-204ENST00000503060 IGLV7-43P04211 117 aa6.95□□□□□ -1.3
USP46-204ENST00000503060 FRAS1Q86XX4 4008 aa6.94□□□□□ -1.3
USP46-204ENST00000503060 RPL37AP61513 92 aaKnown RBP6.94□□□□□ -1.3
USP46-204ENST00000503060 KRTAP10-1P60331 282 aa6.92□□□□□ -1.3
USP46-204ENST00000503060 LINC00472Q9H8W2 130 aa6.92□□□□□ -1.3
USP46-204ENST00000503060 Q6ZSA8 131 aa6.92□□□□□ -1.3
USP46-204ENST00000503060 ANAPC11Q9NYG5 84 aa6.92□□□□□ -1.3
USP46-204ENST00000503060 MIR22HGQ0VDD5 57 aa6.9□□□□□ -1.3
USP46-204ENST00000503060 HYDINQ4G0P3 5121 aa6.89□□□□□ -1.31
USP46-204ENST00000503060 FAT2Q9NYQ8 4349 aa6.88□□□□□ -1.31
USP46-204ENST00000503060 PKD1P98161 4303 aa6.87□□□□□ -1.31
USP46-204ENST00000503060 CSAG1Q6PB30 78 aa6.87□□□□□ -1.31
USP46-204ENST00000503060 WFDC13Q8IUB5 93 aa6.86□□□□□ -1.31
USP46-204ENST00000503060 P0C880 135 aa6.85□□□□□ -1.31
USP46-204ENST00000503060 Q96NJ1 140 aa6.85□□□□□ -1.31
USP46-204ENST00000503060 KRTAP29-1A8MX34 341 aaPredicted RBP6.84□□□□□ -1.32
USP46-204ENST00000503060 LCE6AA0A183 80 aa6.83□□□□□ -1.32
USP46-204ENST00000503060 NDUFB1O75438 58 aa6.81□□□□□ -1.32
USP46-204ENST00000503060 SACSQ9NZJ4 4579 aa6.8□□□□□ -1.32
USP46-204ENST00000503060 SSBP3-AS1Q7Z2R9 100 aa6.8□□□□□ -1.32
USP46-204ENST00000503060 C20orf166-AS1Q96NR2 134 aa6.79□□□□□ -1.32
USP46-204ENST00000503060 LRP1BQ9NZR2 4599 aa6.79□□□□□ -1.32
USP46-204ENST00000503060 MMP24-AS1A0A0U1RRL7 71 aa6.79□□□□□ -1.32
USP46-204ENST00000503060 KRTAP23-1A1A580 65 aa6.77□□□□□ -1.33
USP46-204ENST00000503060 KRTAP13-2Q52LG2 175 aa6.75□□□□□ -1.33
USP46-204ENST00000503060 ZCCHC13Q8WW36 166 aaKnown RBP6.75□□□□□ -1.33
USP46-204ENST00000503060 A0A1B0GVX0 72 aa6.75□□□□□ -1.33
USP46-204ENST00000503060 SPAG11AQ6PDA7 123 aa6.74□□□□□ -1.33
USP46-204ENST00000503060 KRTAP1-4P0C5Y4 121 aa6.73□□□□□ -1.33
USP46-204ENST00000503060 CAMK2N1Q7Z7J9 78 aa6.72□□□□□ -1.33
USP46-204ENST00000503060 LINC01558Q9Y6Z2 57 aa6.72□□□□□ -1.33
USP46-204ENST00000503060 LINC00208Q96KT6 92 aa6.72□□□□□ -1.33
USP46-204ENST00000503060 A0A1B0GVY2 172 aa6.71□□□□□ -1.33
USP46-204ENST00000503060 SPINK6Q6UWN8 80 aa6.71□□□□□ -1.34
USP46-204ENST00000503060 H0Y9P7 68 aa6.69□□□□□ -1.34
USP46-204ENST00000503060 A8MUU9 505 aa6.68□□□□□ -1.34
USP46-204ENST00000503060 DYNC1H1Q14204 4646 aaKnown RBP6.67□□□□□ -1.34
USP46-204ENST00000503060 H3BPC8 53 aa6.67□□□□□ -1.34
USP46-204ENST00000503060 VPS13BQ7Z7G8 4022 aa6.67□□□□□ -1.34
USP46-204ENST00000503060 MRPL34Q9BQ48 92 aaKnown RBP6.66□□□□□ -1.34
USP46-204ENST00000503060 TP53AIP1Q9HCN2 124 aa6.66□□□□□ -1.34
USP46-204ENST00000503060 NDUFAF8A1L188 74 aa6.66□□□□□ -1.34
USP46-204ENST00000503060 SPINK7P58062 85 aa6.66□□□□□ -1.34
USP46-204ENST00000503060 PKHD1P08F94 4074 aa6.65□□□□□ -1.34
USP46-204ENST00000503060 SPANXA2-OT1Q8N9U9 137 aa6.65□□□□□ -1.34
USP46-204ENST00000503060 SMR3BP02814 79 aaPredicted RBP6.64□□□□□ -1.35
USP46-204ENST00000503060 TYMSOSQ8TAI1 123 aa6.63□□□□□ -1.35
USP46-204ENST00000503060 RYR2Q92736 4967 aa6.63□□□□□ -1.35
USP46-204ENST00000503060 KRTAP25-1Q3LHN0 102 aa6.62□□□□□ -1.35
USP46-204ENST00000503060 APOBP04114 4563 aaKnown RBP6.58□□□□□ -1.36
USP46-204ENST00000503060 SPINK1P00995 79 aa6.58□□□□□ -1.36
USP46-204ENST00000503060 KRTAP10-4P60372 401 aaPredicted RBP6.57□□□□□ -1.36
USP46-204ENST00000503060 LINC00304Q8N9R0 145 aa6.55□□□□□ -1.36
USP46-204ENST00000503060 DMAC1Q96GE9 116 aa6.54□□□□□ -1.36
USP46-204ENST00000503060 Q5W150 140 aa6.53□□□□□ -1.36
USP46-204ENST00000503060 KMT2CQ8NEZ4 4911 aaKnown RBP6.53□□□□□ -1.36
USP46-204ENST00000503060 KRTAP13-3Q3SY46 172 aa6.52□□□□□ -1.36
USP46-204ENST00000503060 RPS29P62273 56 aaKnown RBP6.52□□□□□ -1.37
USP46-204ENST00000503060 FAT1Q14517 4588 aa6.52□□□□□ -1.37
USP46-204ENST00000503060 PCOTHQ58A44 107 aa6.51□□□□□ -1.37
USP46-204ENST00000503060 IGLV7-46A0A075B6I9 117 aa6.49□□□□□ -1.37
USP46-204ENST00000503060 SPATA8Q6RVD6 105 aa6.47□□□□□ -1.37
USP46-204ENST00000503060 COA5Q86WW8 74 aa6.47□□□□□ -1.37
USP46-204ENST00000503060 PKHD1L1Q86WI1 4243 aa6.44□□□□□ -1.38
USP46-204ENST00000503060 UQCR11O14957 56 aa6.43□□□□□ -1.38
USP46-204ENST00000503060 IGKV2-30P06310 120 aa6.39□□□□□ -1.39
USP46-204ENST00000503060 Q5VSD8 79 aa6.38□□□□□ -1.39
USP46-204ENST00000503060 RYR3Q15413 4870 aa6.37□□□□□ -1.39
USP46-204ENST00000503060 KRTAP15-1Q3LI76 137 aa6.36□□□□□ -1.39
USP46-204ENST00000503060 HRES1P13985 223 aa6.35□□□□□ -1.39
USP46-204ENST00000503060 Q8N1X5 172 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms