RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 CCDC88BA6NC98 1476 aa-0.53□□□□□ -2.49
PSPC1-205ENST00000497722 CENPEQ02224 2701 aa-0.53□□□□□ -2.49
PSPC1-205ENST00000497722 M0QZ58 72 aa-0.53□□□□□ -2.49
PSPC1-205ENST00000497722 GYPAP02724 150 aa-0.53□□□□□ -2.49
PSPC1-205ENST00000497722 S100A8P05109 93 aa-0.53□□□□□ -2.49
PSPC1-205ENST00000497722 HMGN2P05204 90 aaKnown RBP-0.53□□□□□ -2.49
PSPC1-205ENST00000497722 COX7BP24311 80 aa-0.53□□□□□ -2.49
PSPC1-205ENST00000497722 LINC00158P58513 81 aa-0.53□□□□□ -2.49
PSPC1-205ENST00000497722 FREM2Q5SZK8 3169 aa-0.53□□□□□ -2.49
PSPC1-205ENST00000497722 SCN11AQ9UI33 1791 aa-0.54□□□□□ -2.5
PSPC1-205ENST00000497722 MGAQ8IWI9 3026 aa-0.54□□□□□ -2.5
PSPC1-205ENST00000497722 LCE6AA0A183 80 aa-0.54□□□□□ -2.5
PSPC1-205ENST00000497722 C3orf79P0CE67 100 aa-0.54□□□□□ -2.5
PSPC1-205ENST00000497722 DEFB130BP0DP73 79 aa-0.54□□□□□ -2.5
PSPC1-205ENST00000497722 DEFB130AP0DP74 79 aa-0.54□□□□□ -2.5
PSPC1-205ENST00000497722 IAPPP10997 89 aa-0.54□□□□□ -2.5
PSPC1-205ENST00000497722 LEAP2Q969E1 77 aa-0.54□□□□□ -2.5
PSPC1-205ENST00000497722 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.54□□□□□ -2.5
PSPC1-205ENST00000497722 NEXMIFQ5QGS0 1516 aa-0.54□□□□□ -2.5
PSPC1-205ENST00000497722 CEP350Q5VT06 3117 aa-0.55□□□□□ -2.5
PSPC1-205ENST00000497722 ACYP1P07311 99 aa-0.55□□□□□ -2.5
PSPC1-205ENST00000497722 IFI6P09912 130 aa-0.55□□□□□ -2.5
PSPC1-205ENST00000497722 PKIAP61925 76 aa-0.55□□□□□ -2.5
PSPC1-205ENST00000497722 C20orf78Q9BR46 151 aa-0.55□□□□□ -2.5
PSPC1-205ENST00000497722 NOP10Q9NPE3 64 aaKnown RBP-0.55□□□□□ -2.5
PSPC1-205ENST00000497722 ABCC3O15438 1527 aa-0.55□□□□□ -2.5
PSPC1-205ENST00000497722 ASXL1Q8IXJ9 1541 aa-0.55□□□□□ -2.5
PSPC1-205ENST00000497722 DDX60LQ5H9U9 1706 aaKnown RBP-0.55□□□□□ -2.5
PSPC1-205ENST00000497722 DMDP11532 3685 aa-0.56□□□□□ -2.5
PSPC1-205ENST00000497722 TTC37Q6PGP7 1564 aa-0.56□□□□□ -2.5
PSPC1-205ENST00000497722 A0A1B0GUT8 65 aa-0.56□□□□□ -2.5
PSPC1-205ENST00000497722 M0QY20 66 aa-0.56□□□□□ -2.5
PSPC1-205ENST00000497722 CYB5AP00167 134 aa-0.56□□□□□ -2.5
PSPC1-205ENST00000497722 PLGLAQ15195 96 aa-0.56□□□□□ -2.5
PSPC1-205ENST00000497722 ITSN1Q15811 1721 aa-0.56□□□□□ -2.5
PSPC1-205ENST00000497722 ERVK-7P63135 1459 aa-0.56□□□□□ -2.5
PSPC1-205ENST00000497722 WDFY4Q6ZS81 3184 aa-0.56□□□□□ -2.5
PSPC1-205ENST00000497722 ZNF831Q5JPB2 1677 aa-0.56□□□□□ -2.5
PSPC1-205ENST00000497722 WDFY3Q8IZQ1 3526 aa-0.56□□□□□ -2.5
PSPC1-205ENST00000497722 CCNB3Q8WWL7 1395 aa-0.57□□□□□ -2.5
PSPC1-205ENST00000497722 PLIN4Q96Q06 1357 aa-0.57□□□□□ -2.5
PSPC1-205ENST00000497722 PPLO60437 1756 aa-0.57□□□□□ -2.5
PSPC1-205ENST00000497722 ANKRD36CQ5JPF3 1778 aa-0.57□□□□□ -2.5
PSPC1-205ENST00000497722 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.57□□□□□ -2.5
PSPC1-205ENST00000497722 SMIM11AP58511 58 aa-0.57□□□□□ -2.5
PSPC1-205ENST00000497722 PEA15Q15121 130 aa-0.57□□□□□ -2.5
PSPC1-205ENST00000497722 EP400Q96L91 3159 aa-0.57□□□□□ -2.5
PSPC1-205ENST00000497722 MAP3K4Q9Y6R4 1608 aa-0.57□□□□□ -2.5
PSPC1-205ENST00000497722 CRYBG3Q68DQ2 2970 aa-0.57□□□□□ -2.5
PSPC1-205ENST00000497722 DIP2BQ9P265 1576 aa-0.57□□□□□ -2.5
PSPC1-205ENST00000497722 MAST1Q9Y2H9 1570 aa-0.57□□□□□ -2.5
PSPC1-205ENST00000497722 DOT1LQ8TEK3 1739 aa-0.58□□□□□ -2.5
PSPC1-205ENST00000497722 PARP4Q9UKK3 1724 aaKnown RBP-0.58□□□□□ -2.5
PSPC1-205ENST00000497722 URB2Q14146 1524 aaKnown RBP-0.58□□□□□ -2.5
PSPC1-205ENST00000497722 KIAA0586Q9BVV6 1533 aa-0.58□□□□□ -2.5
PSPC1-205ENST00000497722 VPS13CQ709C8 3753 aa-0.58□□□□□ -2.5
PSPC1-205ENST00000497722 ZC3H13Q5T200 1668 aaKnown RBP-0.58□□□□□ -2.5
PSPC1-205ENST00000497722 LYNX1G3V0Z9 82 aa-0.58□□□□□ -2.5
PSPC1-205ENST00000497722 H3BUA1 57 aa-0.58□□□□□ -2.5
PSPC1-205ENST00000497722 NDUFB1O75438 58 aa-0.58□□□□□ -2.5
PSPC1-205ENST00000497722 SFTA3P0C7M3 94 aa-0.58□□□□□ -2.5
PSPC1-205ENST00000497722 FCER1GP30273 86 aa-0.58□□□□□ -2.5
PSPC1-205ENST00000497722 GAFA1Q96PS6 74 aa-0.58□□□□□ -2.5
PSPC1-205ENST00000497722 SMARCA2P51531 1590 aa-0.58□□□□□ -2.5
PSPC1-205ENST00000497722 DCHS1Q96JQ0 3298 aa-0.58□□□□□ -2.5
PSPC1-205ENST00000497722 CFAP43Q8NDM7 1665 aa-0.59□□□□□ -2.5
PSPC1-205ENST00000497722 ITSN2Q9NZM3 1697 aa-0.59□□□□□ -2.5
PSPC1-205ENST00000497722 IQCF6A8MYZ5 107 aa-0.59□□□□□ -2.5
PSPC1-205ENST00000497722 WT1-ASQ06250 92 aa-0.59□□□□□ -2.5
PSPC1-205ENST00000497722 MUC3AQ02505 3323 aa-0.59□□□□□ -2.5
PSPC1-205ENST00000497722 DNMBPQ6XZF7 1577 aa-0.59□□□□□ -2.5
PSPC1-205ENST00000497722 TOGARAM1Q9Y4F4 1720 aa-0.59□□□□□ -2.5
PSPC1-205ENST00000497722 ARFGEF2Q9Y6D5 1785 aa-0.6□□□□□ -2.5
PSPC1-205ENST00000497722 KIF14Q15058 1648 aa-0.6□□□□□ -2.5
PSPC1-205ENST00000497722 LY75O60449 1722 aa-0.6□□□□□ -2.51
PSPC1-205ENST00000497722 TRAV21A0A0B4J279 112 aa-0.6□□□□□ -2.51
PSPC1-205ENST00000497722 BVES-AS1Q5T3Y7 98 aa-0.6□□□□□ -2.51
PSPC1-205ENST00000497722 MINOS1Q5TGZ0 78 aa-0.6□□□□□ -2.51
PSPC1-205ENST00000497722 ABRACLQ9P1F3 81 aa-0.6□□□□□ -2.51
PSPC1-205ENST00000497722 PLCH1Q4KWH8 1693 aa-0.6□□□□□ -2.51
PSPC1-205ENST00000497722 SZT2Q5T011 3432 aa-0.6□□□□□ -2.51
PSPC1-205ENST00000497722 PIK3C2BO00750 1634 aa-0.6□□□□□ -2.51
PSPC1-205ENST00000497722 RNF17Q9BXT8 1623 aaKnown RBP-0.6□□□□□ -2.51
PSPC1-205ENST00000497722 INO80Q9ULG1 1556 aaPredicted RBP-0.61□□□□□ -2.51
PSPC1-205ENST00000497722 MKI67P46013 3256 aaKnown RBP-0.61□□□□□ -2.51
PSPC1-205ENST00000497722 HFM1A2PYH4 1435 aa-0.61□□□□□ -2.51
PSPC1-205ENST00000497722 UACAQ9BZF9 1416 aa-0.61□□□□□ -2.51
PSPC1-205ENST00000497722 KIF1AQ12756 1690 aa-0.61□□□□□ -2.51
PSPC1-205ENST00000497722 MRPL33O75394 65 aaKnown RBP-0.61□□□□□ -2.51
PSPC1-205ENST00000497722 HMGA1P17096 107 aaKnown RBP-0.61□□□□□ -2.51
PSPC1-205ENST00000497722 NCBP2-AS2Q69YL0 99 aa-0.61□□□□□ -2.51
PSPC1-205ENST00000497722 CFAP54Q96N23 3096 aa-0.61□□□□□ -2.51
PSPC1-205ENST00000497722 NCOA2Q15596 1464 aa-0.61□□□□□ -2.51
PSPC1-205ENST00000497722 NHSQ6T4R5 1651 aa-0.62□□□□□ -2.51
PSPC1-205ENST00000497722 LOC400499M0QZD8 3231 aa-0.62□□□□□ -2.51
PSPC1-205ENST00000497722 PCNTO95613 3336 aa-0.62□□□□□ -2.51
PSPC1-205ENST00000497722 A0A1B0GUL6 1792 aa-0.62□□□□□ -2.51
PSPC1-205ENST00000497722 MYMXA0A1B0GTQ4 84 aa-0.62□□□□□ -2.51
PSPC1-205ENST00000497722 PYY3Q5JQD4 70 aa-0.62□□□□□ -2.51
PSPC1-205ENST00000497722 C6orf48Q9UBA6 75 aa-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms