RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 C1orf134Q5TEV5 83 aa7.14□□□□□ -1.27
SNRNP200-208ENST00000497539 RPL37AP61513 92 aaKnown RBP7.13□□□□□ -1.27
SNRNP200-208ENST00000497539 KRTAP13-1Q8IUC0 172 aa7.13□□□□□ -1.27
SNRNP200-208ENST00000497539 PANO1I0J062 215 aa7.13□□□□□ -1.27
SNRNP200-208ENST00000497539 RTL8CO15255 209 aa7.12□□□□□ -1.27
SNRNP200-208ENST00000497539 PRLHP81277 87 aa7.11□□□□□ -1.27
SNRNP200-208ENST00000497539 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.11□□□□□ -1.27
SNRNP200-208ENST00000497539 DNAH17Q9UFH2 4485 aa7.11□□□□□ -1.27
SNRNP200-208ENST00000497539 IGFL1Q6UW32 110 aa7.1□□□□□ -1.27
SNRNP200-208ENST00000497539 A0A087WSZ3 146 aa7.1□□□□□ -1.27
SNRNP200-208ENST00000497539 DNAH2Q9P225 4427 aa7.08□□□□□ -1.28
SNRNP200-208ENST00000497539 SPINK7P58062 85 aa7.07□□□□□ -1.28
SNRNP200-208ENST00000497539 LY6G6CO95867 125 aa7.06□□□□□ -1.28
SNRNP200-208ENST00000497539 IGLV5-52A0A0A0MRZ9 124 aa7.05□□□□□ -1.28
SNRNP200-208ENST00000497539 TGP01266 2768 aa7.05□□□□□ -1.28
SNRNP200-208ENST00000497539 TENM2Q9NT68 2774 aa7.05□□□□□ -1.28
SNRNP200-208ENST00000497539 NOTCH2NLQ7Z3S9 236 aa7.04□□□□□ -1.28
SNRNP200-208ENST00000497539 LINC00483Q53H64 154 aa7.03□□□□□ -1.28
SNRNP200-208ENST00000497539 HECTD4Q9Y4D8 3996 aa7.02□□□□□ -1.29
SNRNP200-208ENST00000497539 H3BPC8 53 aa7.01□□□□□ -1.29
SNRNP200-208ENST00000497539 COA5Q86WW8 74 aa7.01□□□□□ -1.29
SNRNP200-208ENST00000497539 H0Y9P7 68 aa7□□□□□ -1.29
SNRNP200-208ENST00000497539 KMT2AQ03164 3969 aa6.99□□□□□ -1.29
SNRNP200-208ENST00000497539 KRTAP29-1A8MX34 341 aaPredicted RBP6.98□□□□□ -1.29
SNRNP200-208ENST00000497539 PSORS1C2Q9UIG4 136 aa6.98□□□□□ -1.29
SNRNP200-208ENST00000497539 Q6ZSA8 131 aa6.97□□□□□ -1.29
SNRNP200-208ENST00000497539 ROMO1P60602 79 aa6.97□□□□□ -1.29
SNRNP200-208ENST00000497539 FRAS1Q86XX4 4008 aa6.96□□□□□ -1.29
SNRNP200-208ENST00000497539 ZNF861PO60384 105 aa6.96□□□□□ -1.3
SNRNP200-208ENST00000497539 CSAG1Q6PB30 78 aa6.96□□□□□ -1.3
SNRNP200-208ENST00000497539 DNAH8Q96JB1 4490 aa6.96□□□□□ -1.3
SNRNP200-208ENST00000497539 KRTAP10-2P60368 255 aa6.94□□□□□ -1.3
SNRNP200-208ENST00000497539 DNAH11Q96DT5 4516 aa6.93□□□□□ -1.3
SNRNP200-208ENST00000497539 IGLV7-46A0A075B6I9 117 aa6.93□□□□□ -1.3
SNRNP200-208ENST00000497539 SPAG11AQ6PDA7 123 aa6.92□□□□□ -1.3
SNRNP200-208ENST00000497539 LINC00472Q9H8W2 130 aa6.92□□□□□ -1.3
SNRNP200-208ENST00000497539 A8MWP4 228 aa6.92□□□□□ -1.3
SNRNP200-208ENST00000497539 IGLV7-43P04211 117 aa6.92□□□□□ -1.3
SNRNP200-208ENST00000497539 PCOTHQ58A44 107 aa6.91□□□□□ -1.3
SNRNP200-208ENST00000497539 CIRBP-AS1Q8TBR5 109 aa6.9□□□□□ -1.31
SNRNP200-208ENST00000497539 DNAH5Q8TE73 4624 aa6.89□□□□□ -1.31
SNRNP200-208ENST00000497539 KRTAP10-1P60331 282 aa6.88□□□□□ -1.31
SNRNP200-208ENST00000497539 FAT2Q9NYQ8 4349 aa6.87□□□□□ -1.31
SNRNP200-208ENST00000497539 PKD1P98161 4303 aa6.87□□□□□ -1.31
SNRNP200-208ENST00000497539 MMP24-AS1A0A0U1RRL7 71 aa6.87□□□□□ -1.31
SNRNP200-208ENST00000497539 IGLV9-49A0A0B4J1Y8 123 aa6.86□□□□□ -1.31
SNRNP200-208ENST00000497539 SPATA8Q6RVD6 105 aa6.85□□□□□ -1.31
SNRNP200-208ENST00000497539 Q96NJ1 140 aa6.81□□□□□ -1.32
SNRNP200-208ENST00000497539 HYDINQ4G0P3 5121 aa6.81□□□□□ -1.32
SNRNP200-208ENST00000497539 MIR22HGQ0VDD5 57 aa6.81□□□□□ -1.32
SNRNP200-208ENST00000497539 SSBP3-AS1Q7Z2R9 100 aa6.79□□□□□ -1.32
SNRNP200-208ENST00000497539 ANAPC11Q9NYG5 84 aa6.79□□□□□ -1.32
SNRNP200-208ENST00000497539 A0A1B0GVY2 172 aa6.78□□□□□ -1.32
SNRNP200-208ENST00000497539 P0C880 135 aa6.78□□□□□ -1.32
SNRNP200-208ENST00000497539 C8orf17Q9NRJ1 99 aa6.76□□□□□ -1.33
SNRNP200-208ENST00000497539 SACSQ9NZJ4 4579 aa6.76□□□□□ -1.33
SNRNP200-208ENST00000497539 HRES1P13985 223 aa6.73□□□□□ -1.33
SNRNP200-208ENST00000497539 KRTAP16-1A8MUX0 517 aa6.73□□□□□ -1.33
SNRNP200-208ENST00000497539 KRTAP1-4P0C5Y4 121 aa6.72□□□□□ -1.33
SNRNP200-208ENST00000497539 KRTAP25-1Q3LHN0 102 aa6.72□□□□□ -1.33
SNRNP200-208ENST00000497539 TP53AIP1Q9HCN2 124 aa6.72□□□□□ -1.33
SNRNP200-208ENST00000497539 A0A1B0GVX0 72 aa6.71□□□□□ -1.34
SNRNP200-208ENST00000497539 SPINK6Q6UWN8 80 aa6.71□□□□□ -1.34
SNRNP200-208ENST00000497539 CDK2AP2O75956 126 aa6.7□□□□□ -1.34
SNRNP200-208ENST00000497539 KRTAP13-2Q52LG2 175 aa6.7□□□□□ -1.34
SNRNP200-208ENST00000497539 MRPL34Q9BQ48 92 aaKnown RBP6.69□□□□□ -1.34
SNRNP200-208ENST00000497539 LRP1BQ9NZR2 4599 aa6.68□□□□□ -1.34
SNRNP200-208ENST00000497539 Q5W150 140 aa6.67□□□□□ -1.34
SNRNP200-208ENST00000497539 KMT2CQ8NEZ4 4911 aaKnown RBP6.66□□□□□ -1.34
SNRNP200-208ENST00000497539 RYR2Q92736 4967 aa6.65□□□□□ -1.35
SNRNP200-208ENST00000497539 DYNC1H1Q14204 4646 aaKnown RBP6.64□□□□□ -1.35
SNRNP200-208ENST00000497539 KRTAP10-4P60372 401 aaPredicted RBP6.63□□□□□ -1.35
SNRNP200-208ENST00000497539 UQCR11O14957 56 aa6.62□□□□□ -1.35
SNRNP200-208ENST00000497539 RPS29P62273 56 aaKnown RBP6.62□□□□□ -1.35
SNRNP200-208ENST00000497539 VPS13BQ7Z7G8 4022 aa6.58□□□□□ -1.36
SNRNP200-208ENST00000497539 SPINK1P00995 79 aa6.57□□□□□ -1.36
SNRNP200-208ENST00000497539 A0A1B0GU69 56 aa6.56□□□□□ -1.36
SNRNP200-208ENST00000497539 C20orf166-AS1Q96NR2 134 aa6.56□□□□□ -1.36
SNRNP200-208ENST00000497539 A8MUU9 505 aa6.56□□□□□ -1.36
SNRNP200-208ENST00000497539 TYMSOSQ8TAI1 123 aa6.56□□□□□ -1.36
SNRNP200-208ENST00000497539 APOBP04114 4563 aaKnown RBP6.56□□□□□ -1.36
SNRNP200-208ENST00000497539 RYR3Q15413 4870 aa6.56□□□□□ -1.36
SNRNP200-208ENST00000497539 KRTAP13-3Q3SY46 172 aa6.55□□□□□ -1.36
SNRNP200-208ENST00000497539 PKHD1P08F94 4074 aa6.55□□□□□ -1.36
SNRNP200-208ENST00000497539 PKHD1L1Q86WI1 4243 aa6.54□□□□□ -1.36
SNRNP200-208ENST00000497539 SEC61BP60468 96 aaKnown RBP6.53□□□□□ -1.36
SNRNP200-208ENST00000497539 ACYP2P14621 99 aa6.53□□□□□ -1.36
SNRNP200-208ENST00000497539 LINC00304Q8N9R0 145 aa6.5□□□□□ -1.37
SNRNP200-208ENST00000497539 SMR3BP02814 79 aaPredicted RBP6.5□□□□□ -1.37
SNRNP200-208ENST00000497539 NDUFAF8A1L188 74 aa6.48□□□□□ -1.37
SNRNP200-208ENST00000497539 DMAC1Q96GE9 116 aa6.46□□□□□ -1.38
SNRNP200-208ENST00000497539 FAM229AH3BQW9 127 aa6.43□□□□□ -1.38
SNRNP200-208ENST00000497539 LUZP6Q538Z0 58 aa6.42□□□□□ -1.38
SNRNP200-208ENST00000497539 IGKV2D-30A0A075B6S6 120 aa6.42□□□□□ -1.38
SNRNP200-208ENST00000497539 IGKV2-30P06310 120 aa6.42□□□□□ -1.38
SNRNP200-208ENST00000497539 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
SNRNP200-208ENST00000497539 FAT1Q14517 4588 aa6.36□□□□□ -1.39
SNRNP200-208ENST00000497539 K7ERS5 55 aa6.36□□□□□ -1.39
SNRNP200-208ENST00000497539 KRTAP10-8P60410 259 aa6.35□□□□□ -1.39
SNRNP200-208ENST00000497539 Q5VSD8 79 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms