RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 FAM240AA0A1B0GVK7 77 aa3.16□□□□□ -1.9
GGPS1-208ENST00000497327 J3QR89 54 aa3.16□□□□□ -1.9
GGPS1-208ENST00000497327 CCKP06307 115 aa3.16□□□□□ -1.9
GGPS1-208ENST00000497327 PDE6GP18545 87 aa3.16□□□□□ -1.9
GGPS1-208ENST00000497327 OCR1Q9BZK8 76 aa3.16□□□□□ -1.9
GGPS1-208ENST00000497327 SRRM2Q9UQ35 2752 aaKnown RBP3.16□□□□□ -1.9
GGPS1-208ENST00000497327 RPL37AP61513 92 aaKnown RBP3.15□□□□□ -1.91
GGPS1-208ENST00000497327 ZNF706Q9Y5V0 76 aaPredicted RBP3.15□□□□□ -1.91
GGPS1-208ENST00000497327 EPPK1P58107 5090 aaKnown RBP3.15□□□□□ -1.91
GGPS1-208ENST00000497327 A0A1B0GV72 72 aa3.14□□□□□ -1.91
GGPS1-208ENST00000497327 A0A1W2PNM2 257 aa3.14□□□□□ -1.91
GGPS1-208ENST00000497327 SMR3BP02814 79 aaPredicted RBP3.14□□□□□ -1.91
GGPS1-208ENST00000497327 IGFL1Q6UW32 110 aa3.14□□□□□ -1.91
GGPS1-208ENST00000497327 DSCR8Q96T75 97 aa3.14□□□□□ -1.91
GGPS1-208ENST00000497327 ANAPC11Q9NYG5 84 aa3.14□□□□□ -1.91
GGPS1-208ENST00000497327 HSPG2P98160 4391 aa3.14□□□□□ -1.91
GGPS1-208ENST00000497327 A0A0G2JQZ4 141 aa3.13□□□□□ -1.91
GGPS1-208ENST00000497327 ACYP1P07311 99 aa3.13□□□□□ -1.91
GGPS1-208ENST00000497327 SPINK6Q6UWN8 80 aa3.13□□□□□ -1.91
GGPS1-208ENST00000497327 A0A1B0GW54 56 aa3.12□□□□□ -1.91
GGPS1-208ENST00000497327 F8WEM9 126 aa3.12□□□□□ -1.91
GGPS1-208ENST00000497327 FAM229BQ4G0N7 80 aa3.12□□□□□ -1.91
GGPS1-208ENST00000497327 Q6JHZ5 121 aa3.12□□□□□ -1.91
GGPS1-208ENST00000497327 Q6Q795 121 aa3.12□□□□□ -1.91
GGPS1-208ENST00000497327 LINC00846Q9NV44 126 aa3.12□□□□□ -1.91
GGPS1-208ENST00000497327 VPS13BQ7Z7G8 4022 aa3.12□□□□□ -1.91
GGPS1-208ENST00000497327 CRYGAP11844 174 aa3.11□□□□□ -1.91
GGPS1-208ENST00000497327 KRTAP13-2Q52LG2 175 aa3.11□□□□□ -1.91
GGPS1-208ENST00000497327 MOBPQ13875 183 aa3.1□□□□□ -1.91
GGPS1-208ENST00000497327 SSBP3-AS1Q7Z2R9 100 aa3.1□□□□□ -1.91
GGPS1-208ENST00000497327 LINC00643Q86TS7 51 aa3.09□□□□□ -1.91
GGPS1-208ENST00000497327 VPS25Q9BRG1 176 aa3.09□□□□□ -1.91
GGPS1-208ENST00000497327 TRBV7-7A0A0K0K1E9 115 aa3.08□□□□□ -1.92
GGPS1-208ENST00000497327 C9orf153Q5TBE3 101 aa3.08□□□□□ -1.92
GGPS1-208ENST00000497327 Q5VSD8 79 aa3.08□□□□□ -1.92
GGPS1-208ENST00000497327 BIRC6Q9NR09 4857 aa3.08□□□□□ -1.92
GGPS1-208ENST00000497327 MT-ATP8P03928 68 aa3.07□□□□□ -1.92
GGPS1-208ENST00000497327 CD164Q04900 197 aa3.07□□□□□ -1.92
GGPS1-208ENST00000497327 UBL5Q9BZL1 73 aa3.07□□□□□ -1.92
GGPS1-208ENST00000497327 PKHD1L1Q86WI1 4243 aa3.07□□□□□ -1.92
GGPS1-208ENST00000497327 A0A087WSZ3 146 aa3.06□□□□□ -1.92
GGPS1-208ENST00000497327 NREPQ16612 68 aa3.06□□□□□ -1.92
GGPS1-208ENST00000497327 SIGMAR1Q99720 223 aa3.06□□□□□ -1.92
GGPS1-208ENST00000497327 ATP5EP2Q5VTU8 51 aa3.05□□□□□ -1.92
GGPS1-208ENST00000497327 Q5XG85 94 aa3.05□□□□□ -1.92
GGPS1-208ENST00000497327 LINC00472Q9H8W2 130 aa3.05□□□□□ -1.92
GGPS1-208ENST00000497327 HERC2O95714 4834 aa3.04□□□□□ -1.92
GGPS1-208ENST00000497327 IGKV3D-7A0A0C4DH55 119 aa3.04□□□□□ -1.92
GGPS1-208ENST00000497327 CXCL6P80162 114 aa3.04□□□□□ -1.92
GGPS1-208ENST00000497327 ASB16-AS1Q495Z4 193 aa3.04□□□□□ -1.92
GGPS1-208ENST00000497327 HRCT1Q6UXD1 115 aa3.04□□□□□ -1.92
GGPS1-208ENST00000497327 TYMSOSQ8TAI1 123 aa3.04□□□□□ -1.92
GGPS1-208ENST00000497327 Q96NJ1 140 aa3.04□□□□□ -1.92
GGPS1-208ENST00000497327 IMUPQ9GZP8 106 aa3.04□□□□□ -1.92
GGPS1-208ENST00000497327 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
GGPS1-208ENST00000497327 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
GGPS1-208ENST00000497327 FLG2Q5D862 2391 aaPredicted RBP3.02□□□□□ -1.93
GGPS1-208ENST00000497327 BPY2O14599 106 aa3.02□□□□□ -1.93
GGPS1-208ENST00000497327 RPS29P62273 56 aaKnown RBP3.02□□□□□ -1.93
GGPS1-208ENST00000497327 SPAG11AQ6PDA7 123 aa3.02□□□□□ -1.93
GGPS1-208ENST00000497327 SS18L2Q9UHA2 77 aa3.02□□□□□ -1.93
GGPS1-208ENST00000497327 LRP1Q07954 4544 aaKnown RBP3.01□□□□□ -1.93
GGPS1-208ENST00000497327 SPINK1P00995 79 aa3.01□□□□□ -1.93
GGPS1-208ENST00000497327 IGKV4-1P06312 121 aa3.01□□□□□ -1.93
GGPS1-208ENST00000497327 DEFB116Q30KQ4 102 aa3.01□□□□□ -1.93
GGPS1-208ENST00000497327 LINC00304Q8N9R0 145 aa3.01□□□□□ -1.93
GGPS1-208ENST00000497327 FAT3Q8TDW7 4589 aa3.01□□□□□ -1.93
GGPS1-208ENST00000497327 A0A087WVE0 104 aa3□□□□□ -1.93
GGPS1-208ENST00000497327 J3KT08 172 aa3□□□□□ -1.93
GGPS1-208ENST00000497327 MT1HL1P0DM35 61 aa3□□□□□ -1.93
GGPS1-208ENST00000497327 SCGB1A1P11684 91 aa3□□□□□ -1.93
GGPS1-208ENST00000497327 HIST1H4AP62805 103 aaKnown RBP3□□□□□ -1.93
GGPS1-208ENST00000497327 C1orf195Q5TG92 126 aa3□□□□□ -1.93
GGPS1-208ENST00000497327 Q8N9L7 120 aa3□□□□□ -1.93
GGPS1-208ENST00000497327 ABCA13Q86UQ4 5058 aa2.99□□□□□ -1.93
GGPS1-208ENST00000497327 A8MWP4 228 aa2.99□□□□□ -1.93
GGPS1-208ENST00000497327 K7EQZ3 153 aa2.99□□□□□ -1.93
GGPS1-208ENST00000497327 PRR15Q8IV56 129 aa2.99□□□□□ -1.93
GGPS1-208ENST00000497327 LIMD2Q9BT23 127 aa2.99□□□□□ -1.93
GGPS1-208ENST00000497327 TNXBP22105 4242 aa2.98□□□□□ -1.93
GGPS1-208ENST00000497327 OXTP01178 125 aa2.98□□□□□ -1.93
GGPS1-208ENST00000497327 DMBT1Q9UGM3 2413 aaPredicted RBP2.97□□□□□ -1.93
GGPS1-208ENST00000497327 MMP24-AS1A0A0U1RRL7 71 aa2.96□□□□□ -1.94
GGPS1-208ENST00000497327 FAM236AA0A1B0GUQ0 79 aa2.96□□□□□ -1.94
GGPS1-208ENST00000497327 FAM236BA0A1B0GV22 79 aa2.96□□□□□ -1.94
GGPS1-208ENST00000497327 A0A1B0GVX0 72 aa2.96□□□□□ -1.94
GGPS1-208ENST00000497327 HCG22E2RYF7 251 aa2.95□□□□□ -1.94
GGPS1-208ENST00000497327 NDUFB1O75438 58 aa2.95□□□□□ -1.94
GGPS1-208ENST00000497327 C8orf17Q9NRJ1 99 aa2.95□□□□□ -1.94
GGPS1-208ENST00000497327 MYCBP2O75592 4640 aa2.95□□□□□ -1.94
GGPS1-208ENST00000497327 PCLOQ9Y6V0 5065 aa2.94□□□□□ -1.94
GGPS1-208ENST00000497327 IGHV6-1A0A0B4J1U7 121 aa2.93□□□□□ -1.94
GGPS1-208ENST00000497327 C8orf87E5RJ46 101 aa2.93□□□□□ -1.94
GGPS1-208ENST00000497327 hDV103S1A0JD37 113 aa2.92□□□□□ -1.94
GGPS1-208ENST00000497327 ATOX1O00244 68 aa2.92□□□□□ -1.94
GGPS1-208ENST00000497327 CASC2Q6XLA1 102 aa2.92□□□□□ -1.94
GGPS1-208ENST00000497327 WFDC13Q8IUB5 93 aa2.92□□□□□ -1.94
GGPS1-208ENST00000497327 RETNLBQ9BQ08 111 aa2.92□□□□□ -1.94
GGPS1-208ENST00000497327 LINC00313P59037 77 aa2.91□□□□□ -1.94
GGPS1-208ENST00000497327 FP248Q71RG6 208 aaPredicted RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms