RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 LINC00208Q96KT6 92 aa4.22□□□□□ -1.73
HOXA9-206ENST00000497089 HSPG2P98160 4391 aa4.22□□□□□ -1.73
HOXA9-206ENST00000497089 IGLV4-60A0A075B6I1 120 aa4.21□□□□□ -1.74
HOXA9-206ENST00000497089 DNAH5Q8TE73 4624 aa4.2□□□□□ -1.74
HOXA9-206ENST00000497089 APOBP04114 4563 aaKnown RBP4.2□□□□□ -1.74
HOXA9-206ENST00000497089 IGKV3OR2-268A0A0C4DH90 116 aa4.2□□□□□ -1.74
HOXA9-206ENST00000497089 ASB16-AS1Q495Z4 193 aa4.2□□□□□ -1.74
HOXA9-206ENST00000497089 PCLOQ9Y6V0 5065 aa4.2□□□□□ -1.74
HOXA9-206ENST00000497089 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.19□□□□□ -1.74
HOXA9-206ENST00000497089 A0A087X002 238 aa4.18□□□□□ -1.74
HOXA9-206ENST00000497089 PRR3P79522 188 aaKnown RBP4.18□□□□□ -1.74
HOXA9-206ENST00000497089 Q6ZSA8 131 aa4.18□□□□□ -1.74
HOXA9-206ENST00000497089 Q8N9L7 120 aa4.18□□□□□ -1.74
HOXA9-206ENST00000497089 KCNQ1DNQ9H478 68 aa4.18□□□□□ -1.74
HOXA9-206ENST00000497089 KLK12Q9UKR0 248 aa4.18□□□□□ -1.74
HOXA9-206ENST00000497089 KRTAP29-1A8MX34 341 aaPredicted RBP4.17□□□□□ -1.74
HOXA9-206ENST00000497089 H0Y9J4 135 aa4.17□□□□□ -1.74
HOXA9-206ENST00000497089 KIAA0087Q14695 138 aa4.17□□□□□ -1.74
HOXA9-206ENST00000497089 Q5VSD8 79 aa4.17□□□□□ -1.74
HOXA9-206ENST00000497089 ABCA13Q86UQ4 5058 aa4.17□□□□□ -1.74
HOXA9-206ENST00000497089 C9orf116Q5BN46 136 aaPredicted RBP4.16□□□□□ -1.74
HOXA9-206ENST00000497089 CASC2Q6XLA1 102 aa4.16□□□□□ -1.74
HOXA9-206ENST00000497089 PRR34Q9NV39 138 aa4.16□□□□□ -1.74
HOXA9-206ENST00000497089 UBR4Q5T4S7 5183 aa4.16□□□□□ -1.74
HOXA9-206ENST00000497089 DMBT1Q9UGM3 2413 aaPredicted RBP4.16□□□□□ -1.74
HOXA9-206ENST00000497089 IGKV2D-24A0A075B6R9 120 aa4.15□□□□□ -1.74
HOXA9-206ENST00000497089 GVQW2A0A096LPI5 108 aaPredicted RBP4.15□□□□□ -1.74
HOXA9-206ENST00000497089 SRRM2Q9UQ35 2752 aaKnown RBP4.15□□□□□ -1.74
HOXA9-206ENST00000497089 IGLV5-48A0A075B6I7 105 aa4.14□□□□□ -1.75
HOXA9-206ENST00000497089 SMR3BP02814 79 aaPredicted RBP4.14□□□□□ -1.75
HOXA9-206ENST00000497089 C14orf177Q52M58 125 aa4.14□□□□□ -1.75
HOXA9-206ENST00000497089 KRTAP26-1Q6PEX3 210 aa4.14□□□□□ -1.75
HOXA9-206ENST00000497089 FLG2Q5D862 2391 aaPredicted RBP4.14□□□□□ -1.75
HOXA9-206ENST00000497089 FAT1Q14517 4588 aa4.14□□□□□ -1.75
HOXA9-206ENST00000497089 ANGP03950 147 aaKnown RBP4.14□□□□□ -1.75
HOXA9-206ENST00000497089 MOBPQ13875 183 aa4.14□□□□□ -1.75
HOXA9-206ENST00000497089 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
HOXA9-206ENST00000497089 LINC01558Q9Y6Z2 57 aa4.14□□□□□ -1.75
HOXA9-206ENST00000497089 A8MU10 97 aa4.13□□□□□ -1.75
HOXA9-206ENST00000497089 SPAG11BQ08648 103 aa4.13□□□□□ -1.75
HOXA9-206ENST00000497089 PRR4Q16378 134 aa4.13□□□□□ -1.75
HOXA9-206ENST00000497089 LINC01554Q52M75 96 aa4.13□□□□□ -1.75
HOXA9-206ENST00000497089 REG3AQ06141 175 aa4.12□□□□□ -1.75
HOXA9-206ENST00000497089 NOTCH2NLQ7Z3S9 236 aa4.12□□□□□ -1.75
HOXA9-206ENST00000497089 ST20-AS1Q8NBB2 130 aa4.12□□□□□ -1.75
HOXA9-206ENST00000497089 Q8NBF4 154 aa4.12□□□□□ -1.75
HOXA9-206ENST00000497089 Q8NDZ9 215 aa4.12□□□□□ -1.75
HOXA9-206ENST00000497089 CHCHD10Q8WYQ3 142 aaPredicted RBP4.12□□□□□ -1.75
HOXA9-206ENST00000497089 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
HOXA9-206ENST00000497089 COA5Q86WW8 74 aa4.11□□□□□ -1.75
HOXA9-206ENST00000497089 C9orf163Q8N9P6 203 aa4.11□□□□□ -1.75
HOXA9-206ENST00000497089 CIRBP-AS1Q8TBR5 109 aa4.11□□□□□ -1.75
HOXA9-206ENST00000497089 SPRR4Q96PI1 79 aa4.11□□□□□ -1.75
HOXA9-206ENST00000497089 H0Y9P7 68 aa4.1□□□□□ -1.75
HOXA9-206ENST00000497089 DSCR10P59022 87 aa4.1□□□□□ -1.75
HOXA9-206ENST00000497089 KRTAP10-4P60372 401 aaPredicted RBP4.1□□□□□ -1.75
HOXA9-206ENST00000497089 CNBPP62633 177 aaKnown RBP4.1□□□□□ -1.75
HOXA9-206ENST00000497089 CLPSL2Q6UWE3 100 aa4.1□□□□□ -1.75
HOXA9-206ENST00000497089 PLAC8Q9NZF1 115 aa4.1□□□□□ -1.75
HOXA9-206ENST00000497089 DHRS4-AS1Q9P1J3 65 aa4.1□□□□□ -1.75
HOXA9-206ENST00000497089 IGLV10-54A0A075B6I4 117 aa4.09□□□□□ -1.75
HOXA9-206ENST00000497089 IGLV7-46A0A075B6I9 117 aa4.08□□□□□ -1.76
HOXA9-206ENST00000497089 K7EQZ3 153 aa4.08□□□□□ -1.76
HOXA9-206ENST00000497089 LINC00313P59037 77 aa4.08□□□□□ -1.76
HOXA9-206ENST00000497089 C1orf137Q5JT78 98 aa4.08□□□□□ -1.76
HOXA9-206ENST00000497089 A0A1W2PNM2 257 aa4.07□□□□□ -1.76
HOXA9-206ENST00000497089 UNQ6190/PRO20217Q6UXQ8 127 aa4.07□□□□□ -1.76
HOXA9-206ENST00000497089 MYCBP2O75592 4640 aa4.07□□□□□ -1.76
HOXA9-206ENST00000497089 C15orf56Q8N910 161 aa4.06□□□□□ -1.76
HOXA9-206ENST00000497089 DNAH8Q96JB1 4490 aa4.05□□□□□ -1.76
HOXA9-206ENST00000497089 PANO1I0J062 215 aa4.05□□□□□ -1.76
HOXA9-206ENST00000497089 Q8N377 158 aa4.05□□□□□ -1.76
HOXA9-206ENST00000497089 IGHV6-1A0A0B4J1U7 121 aa4.04□□□□□ -1.76
HOXA9-206ENST00000497089 C6orf48Q9UBA6 75 aa4.04□□□□□ -1.76
HOXA9-206ENST00000497089 RPL37AP61513 92 aaKnown RBP4.03□□□□□ -1.76
HOXA9-206ENST00000497089 SPACA4Q8TDM5 124 aa4.03□□□□□ -1.76
HOXA9-206ENST00000497089 HERC1Q15751 4861 aa4.03□□□□□ -1.76
HOXA9-206ENST00000497089 WFDC13Q8IUB5 93 aa4.02□□□□□ -1.77
HOXA9-206ENST00000497089 DEFB105AQ8NG35 78 aa4.02□□□□□ -1.77
HOXA9-206ENST00000497089 XAGE1AQ9HD64 81 aa4.02□□□□□ -1.77
HOXA9-206ENST00000497089 CHTF8P0CG12 524 aa4.02□□□□□ -1.77
HOXA9-206ENST00000497089 RETNLBQ9BQ08 111 aa4.02□□□□□ -1.77
HOXA9-206ENST00000497089 VPS13BQ7Z7G8 4022 aa4.01□□□□□ -1.77
HOXA9-206ENST00000497089 SPINK7P58062 85 aa4.01□□□□□ -1.77
HOXA9-206ENST00000497089 SPAG11AQ6PDA7 123 aa4.01□□□□□ -1.77
HOXA9-206ENST00000497089 CAMK2N2Q96S95 79 aa4.01□□□□□ -1.77
HOXA9-206ENST00000497089 TP53AIP1Q9HCN2 124 aa4.01□□□□□ -1.77
HOXA9-206ENST00000497089 Q6ZRX8 168 aa4□□□□□ -1.77
HOXA9-206ENST00000497089 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
HOXA9-206ENST00000497089 A0A096LNI7 61 aa3.99□□□□□ -1.77
HOXA9-206ENST00000497089 RPL37AP8A6NKH3 93 aa3.99□□□□□ -1.77
HOXA9-206ENST00000497089 MT3P25713 68 aa3.99□□□□□ -1.77
HOXA9-206ENST00000497089 LRP1Q07954 4544 aaKnown RBP3.99□□□□□ -1.77
HOXA9-206ENST00000497089 A8MWP4 228 aa3.98□□□□□ -1.77
HOXA9-206ENST00000497089 C7orf33Q8WU49 177 aa3.98□□□□□ -1.77
HOXA9-206ENST00000497089 ZNF706Q9Y5V0 76 aaPredicted RBP3.98□□□□□ -1.77
HOXA9-206ENST00000497089 IGLV8-61A0A075B6I0 122 aa3.97□□□□□ -1.77
HOXA9-206ENST00000497089 IGKV2-24A0A0C4DH68 120 aa3.97□□□□□ -1.77
HOXA9-206ENST00000497089 MT1HL1P0DM35 61 aa3.97□□□□□ -1.77
HOXA9-206ENST00000497089 SPRR1AP35321 89 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms