RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 M0R378 163 aa3.14□□□□□ -1.91
CSMD3-208ENST00000497026 ELOF1P60002 83 aaKnown RBP3.14□□□□□ -1.91
CSMD3-208ENST00000497026 SYCNQ0VAF6 134 aa3.14□□□□□ -1.91
CSMD3-208ENST00000497026 CD164L2Q6UWJ8 174 aa3.14□□□□□ -1.91
CSMD3-208ENST00000497026 LINC00269Q8N2A0 174 aa3.14□□□□□ -1.91
CSMD3-208ENST00000497026 DIRC1Q969H9 104 aa3.14□□□□□ -1.91
CSMD3-208ENST00000497026 PRR34Q9NV39 138 aa3.14□□□□□ -1.91
CSMD3-208ENST00000497026 DNAH8Q96JB1 4490 aa3.13□□□□□ -1.91
CSMD3-208ENST00000497026 IGLV4-60A0A075B6I1 120 aa3.13□□□□□ -1.91
CSMD3-208ENST00000497026 IGKV2D-24A0A075B6R9 120 aa3.13□□□□□ -1.91
CSMD3-208ENST00000497026 IGHV3OR16-9A0A0B4J2B5 98 aa3.13□□□□□ -1.91
CSMD3-208ENST00000497026 A0A1B0GW54 56 aa3.13□□□□□ -1.91
CSMD3-208ENST00000497026 CHKB-CPT1BH3BT56 60 aa3.13□□□□□ -1.91
CSMD3-208ENST00000497026 ANGP03950 147 aaKnown RBP3.13□□□□□ -1.91
CSMD3-208ENST00000497026 KRTAP26-1Q6PEX3 210 aa3.13□□□□□ -1.91
CSMD3-208ENST00000497026 CLPSL2Q6UWE3 100 aa3.13□□□□□ -1.91
CSMD3-208ENST00000497026 Q6ZQY7 126 aa3.13□□□□□ -1.91
CSMD3-208ENST00000497026 LCA10Q71F78 164 aa3.13□□□□□ -1.91
CSMD3-208ENST00000497026 PHF5AQ7RTV0 110 aaKnown RBP3.13□□□□□ -1.91
CSMD3-208ENST00000497026 FAT1Q14517 4588 aa3.12□□□□□ -1.91
CSMD3-208ENST00000497026 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.12□□□□□ -1.91
CSMD3-208ENST00000497026 IGKV3OR2-268A0A0C4DH90 116 aa3.12□□□□□ -1.91
CSMD3-208ENST00000497026 ETDCA0A1B0GVM5 59 aa3.12□□□□□ -1.91
CSMD3-208ENST00000497026 A8MUN3 132 aa3.12□□□□□ -1.91
CSMD3-208ENST00000497026 HIGD2BQ4VC39 106 aa3.12□□□□□ -1.91
CSMD3-208ENST00000497026 ABCA13Q86UQ4 5058 aa3.12□□□□□ -1.91
CSMD3-208ENST00000497026 REG3AQ06141 175 aa3.11□□□□□ -1.91
CSMD3-208ENST00000497026 Q5VV11 94 aa3.11□□□□□ -1.91
CSMD3-208ENST00000497026 SPTSSBQ8NFR3 76 aa3.11□□□□□ -1.91
CSMD3-208ENST00000497026 Q9BRP9 147 aa3.11□□□□□ -1.91
CSMD3-208ENST00000497026 IGLV10-54A0A075B6I4 117 aa3.1□□□□□ -1.91
CSMD3-208ENST00000497026 LINC00959A0A1B0GUT2 108 aa3.1□□□□□ -1.91
CSMD3-208ENST00000497026 A6NED7 52 aa3.1□□□□□ -1.91
CSMD3-208ENST00000497026 HCG22E2RYF7 251 aa3.1□□□□□ -1.91
CSMD3-208ENST00000497026 H3BPC8 53 aa3.1□□□□□ -1.91
CSMD3-208ENST00000497026 MP68P56378 58 aa3.1□□□□□ -1.91
CSMD3-208ENST00000497026 Q6ZSA8 131 aa3.1□□□□□ -1.91
CSMD3-208ENST00000497026 SPANXA2-OT1Q8N9U9 137 aa3.1□□□□□ -1.91
CSMD3-208ENST00000497026 ZCCHC13Q8WW36 166 aaKnown RBP3.1□□□□□ -1.91
CSMD3-208ENST00000497026 PRR15LQ9BU68 103 aa3.1□□□□□ -1.91
CSMD3-208ENST00000497026 CDC42SE1Q9NRR8 79 aa3.1□□□□□ -1.91
CSMD3-208ENST00000497026 A6NN06 94 aa3.1□□□□□ -1.91
CSMD3-208ENST00000497026 NKAPP1Q8N9T2 125 aa3.1□□□□□ -1.91
CSMD3-208ENST00000497026 LINC00208Q96KT6 92 aa3.1□□□□□ -1.91
CSMD3-208ENST00000497026 IGLV9-49A0A0B4J1Y8 123 aa3.09□□□□□ -1.92
CSMD3-208ENST00000497026 C8orf87E5RJ46 101 aa3.09□□□□□ -1.92
CSMD3-208ENST00000497026 IGLV6-57P01721 117 aa3.09□□□□□ -1.92
CSMD3-208ENST00000497026 SMR3BP02814 79 aaPredicted RBP3.08□□□□□ -1.92
CSMD3-208ENST00000497026 C15orf56Q8N910 161 aa3.08□□□□□ -1.92
CSMD3-208ENST00000497026 Q8N9L7 120 aa3.08□□□□□ -1.92
CSMD3-208ENST00000497026 CHCHD10Q8WYQ3 142 aaPredicted RBP3.08□□□□□ -1.92
CSMD3-208ENST00000497026 PANO1I0J062 215 aa3.07□□□□□ -1.92
CSMD3-208ENST00000497026 Q5VSD8 79 aa3.07□□□□□ -1.92
CSMD3-208ENST00000497026 CASC2Q6XLA1 102 aa3.07□□□□□ -1.92
CSMD3-208ENST00000497026 C9orf163Q8N9P6 203 aa3.07□□□□□ -1.92
CSMD3-208ENST00000497026 IGLV7-46A0A075B6I9 117 aa3.06□□□□□ -1.92
CSMD3-208ENST00000497026 LOC101927531A0A1B0GV80 90 aa3.06□□□□□ -1.92
CSMD3-208ENST00000497026 CNBPP62633 177 aaKnown RBP3.06□□□□□ -1.92
CSMD3-208ENST00000497026 PRR3P79522 188 aaKnown RBP3.06□□□□□ -1.92
CSMD3-208ENST00000497026 SPAG11BQ08648 103 aa3.06□□□□□ -1.92
CSMD3-208ENST00000497026 CIRBP-AS1Q8TBR5 109 aa3.06□□□□□ -1.92
CSMD3-208ENST00000497026 KCNQ1DNQ9H478 68 aa3.06□□□□□ -1.92
CSMD3-208ENST00000497026 GVQW2A0A096LPI5 108 aaPredicted RBP3.05□□□□□ -1.92
CSMD3-208ENST00000497026 KRTAP10-4P60372 401 aaPredicted RBP3.05□□□□□ -1.92
CSMD3-208ENST00000497026 CHTF8P0CG12 524 aa3.04□□□□□ -1.92
CSMD3-208ENST00000497026 KIAA0087Q14695 138 aa3.04□□□□□ -1.92
CSMD3-208ENST00000497026 PRR4Q16378 134 aa3.04□□□□□ -1.92
CSMD3-208ENST00000497026 ASB16-AS1Q495Z4 193 aa3.04□□□□□ -1.92
CSMD3-208ENST00000497026 C9orf116Q5BN46 136 aaPredicted RBP3.03□□□□□ -1.92
CSMD3-208ENST00000497026 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
CSMD3-208ENST00000497026 H0Y9P7 68 aa3.02□□□□□ -1.93
CSMD3-208ENST00000497026 Q8NBF4 154 aa3.02□□□□□ -1.93
CSMD3-208ENST00000497026 SPACA4Q8TDM5 124 aa3.02□□□□□ -1.93
CSMD3-208ENST00000497026 VPS13BQ7Z7G8 4022 aa3.02□□□□□ -1.93
CSMD3-208ENST00000497026 FLG2Q5D862 2391 aaPredicted RBP3.02□□□□□ -1.93
CSMD3-208ENST00000497026 IGLV5-48A0A075B6I7 105 aa3.02□□□□□ -1.93
CSMD3-208ENST00000497026 A0A096LNI7 61 aa3.02□□□□□ -1.93
CSMD3-208ENST00000497026 MOBPQ13875 183 aa3.02□□□□□ -1.93
CSMD3-208ENST00000497026 COA5Q86WW8 74 aa3.02□□□□□ -1.93
CSMD3-208ENST00000497026 ST20-AS1Q8NBB2 130 aa3.02□□□□□ -1.93
CSMD3-208ENST00000497026 LINC01558Q9Y6Z2 57 aa3.02□□□□□ -1.93
CSMD3-208ENST00000497026 MYCBP2O75592 4640 aa3.01□□□□□ -1.93
CSMD3-208ENST00000497026 IGKV2-24A0A0C4DH68 120 aa3.01□□□□□ -1.93
CSMD3-208ENST00000497026 K7EQZ3 153 aa3.01□□□□□ -1.93
CSMD3-208ENST00000497026 LINC01554Q52M75 96 aa3.01□□□□□ -1.93
CSMD3-208ENST00000497026 Q8NDZ9 215 aa3.01□□□□□ -1.93
CSMD3-208ENST00000497026 SPRR4Q96PI1 79 aa3.01□□□□□ -1.93
CSMD3-208ENST00000497026 PLAC8Q9NZF1 115 aa3.01□□□□□ -1.93
CSMD3-208ENST00000497026 DHRS4-AS1Q9P1J3 65 aa3.01□□□□□ -1.93
CSMD3-208ENST00000497026 A8MU10 97 aa3□□□□□ -1.93
CSMD3-208ENST00000497026 C1orf137Q5JT78 98 aa3□□□□□ -1.93
CSMD3-208ENST00000497026 LRP1Q07954 4544 aaKnown RBP2.99□□□□□ -1.93
CSMD3-208ENST00000497026 PKHD1L1Q86WI1 4243 aa2.99□□□□□ -1.93
CSMD3-208ENST00000497026 RPL37AP61513 92 aaKnown RBP2.99□□□□□ -1.93
CSMD3-208ENST00000497026 UNQ6190/PRO20217Q6UXQ8 127 aa2.99□□□□□ -1.93
CSMD3-208ENST00000497026 CAMK2N2Q96S95 79 aa2.99□□□□□ -1.93
CSMD3-208ENST00000497026 LINC00313P59037 77 aa2.98□□□□□ -1.93
CSMD3-208ENST00000497026 WFDC13Q8IUB5 93 aa2.98□□□□□ -1.93
CSMD3-208ENST00000497026 C6orf48Q9UBA6 75 aa2.98□□□□□ -1.93
CSMD3-208ENST00000497026 FAT3Q8TDW7 4589 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms