RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 PIN1P1O15428 100 aa1.43□□□□□ -2.18
SNX13-211ENST00000496855 SSBP3-AS1Q7Z2R9 100 aa1.43□□□□□ -2.18
SNX13-211ENST00000496855 ANKRD36CQ5JPF3 1778 aa1.43□□□□□ -2.18
SNX13-211ENST00000496855 CMYA5Q8N3K9 4069 aa1.43□□□□□ -2.18
SNX13-211ENST00000496855 A0A0D9SG42 100 aa1.43□□□□□ -2.18
SNX13-211ENST00000496855 UBE2DNLQ8IWF7 75 aa1.43□□□□□ -2.18
SNX13-211ENST00000496855 DMBT1Q9UGM3 2413 aaPredicted RBP1.42□□□□□ -2.18
SNX13-211ENST00000496855 TRBV6-1A0A0K0K1D8 114 aa1.42□□□□□ -2.18
SNX13-211ENST00000496855 SMIM31A0A1B0GVY4 71 aa1.42□□□□□ -2.18
SNX13-211ENST00000496855 GNGT1P63211 74 aa1.42□□□□□ -2.18
SNX13-211ENST00000496855 LYSTQ99698 3801 aa1.41□□□□□ -2.18
SNX13-211ENST00000496855 LINC00959A0A1B0GUT2 108 aa1.41□□□□□ -2.18
SNX13-211ENST00000496855 SMIM13P0DJ93 91 aa1.41□□□□□ -2.18
SNX13-211ENST00000496855 HEPN1Q6WQI6 88 aa1.41□□□□□ -2.18
SNX13-211ENST00000496855 KNL1Q8NG31 2342 aa1.4□□□□□ -2.18
SNX13-211ENST00000496855 ANK3Q12955 4377 aaKnown RBP1.4□□□□□ -2.19
SNX13-211ENST00000496855 ARL14EPLP0DKL9 152 aa1.4□□□□□ -2.19
SNX13-211ENST00000496855 ANKRD36A6QL64 1941 aa1.4□□□□□ -2.19
SNX13-211ENST00000496855 KMT2AQ03164 3969 aa1.39□□□□□ -2.19
SNX13-211ENST00000496855 A0A1B0GU69 56 aa1.39□□□□□ -2.19
SNX13-211ENST00000496855 S100A3P33764 101 aa1.39□□□□□ -2.19
SNX13-211ENST00000496855 SPINK9Q5DT21 86 aa1.39□□□□□ -2.19
SNX13-211ENST00000496855 SRRM2Q9UQ35 2752 aaKnown RBP1.39□□□□□ -2.19
SNX13-211ENST00000496855 FXYD6P3P58550 94 aa1.38□□□□□ -2.19
SNX13-211ENST00000496855 HMCN2Q8NDA2 5059 aa1.38□□□□□ -2.19
SNX13-211ENST00000496855 A0A1B0GUT8 65 aa1.37□□□□□ -2.19
SNX13-211ENST00000496855 GPR98Q8WXG9 6306 aa1.36□□□□□ -2.19
SNX13-211ENST00000496855 FAM103A1Q9BTL3 118 aaKnown RBP1.36□□□□□ -2.19
SNX13-211ENST00000496855 I3L2K1 104 aa1.35□□□□□ -2.19
SNX13-211ENST00000496855 IFI6P09912 130 aa1.35□□□□□ -2.19
SNX13-211ENST00000496855 COX6B1P14854 86 aa1.35□□□□□ -2.19
SNX13-211ENST00000496855 PKHD1P08F94 4074 aa1.34□□□□□ -2.19
SNX13-211ENST00000496855 TRAV21A0A0B4J279 112 aa1.34□□□□□ -2.19
SNX13-211ENST00000496855 LCE6AA0A183 80 aa1.34□□□□□ -2.19
SNX13-211ENST00000496855 HMGA1P17096 107 aaKnown RBP1.33□□□□□ -2.2
SNX13-211ENST00000496855 DEFB112Q30KQ8 113 aa1.33□□□□□ -2.2
SNX13-211ENST00000496855 HSPG2P98160 4391 aa1.33□□□□□ -2.2
SNX13-211ENST00000496855 SSPOA2VEC9 5147 aa1.32□□□□□ -2.2
SNX13-211ENST00000496855 UMAD1C9J7I0 102 aa1.32□□□□□ -2.2
SNX13-211ENST00000496855 IFI27P40305 119 aaPredicted RBP1.31□□□□□ -2.2
SNX13-211ENST00000496855 PRB3Q04118 309 aaPredicted RBP1.31□□□□□ -2.2
SNX13-211ENST00000496855 ATP5EP2Q5VTU8 51 aa1.31□□□□□ -2.2
SNX13-211ENST00000496855 CRIPTQ9P021 101 aa1.31□□□□□ -2.2
SNX13-211ENST00000496855 HILPDAQ9Y5L2 63 aa1.31□□□□□ -2.2
SNX13-211ENST00000496855 DNAH9Q9NYC9 4486 aa1.3□□□□□ -2.2
SNX13-211ENST00000496855 USF3Q68DE3 2245 aa1.3□□□□□ -2.2
SNX13-211ENST00000496855 HUWE1Q7Z6Z7 4374 aaKnown RBP1.3□□□□□ -2.2
SNX13-211ENST00000496855 A0A087WXM4 84 aa1.3□□□□□ -2.2
SNX13-211ENST00000496855 NEBP20929 6669 aa1.3□□□□□ -2.2
SNX13-211ENST00000496855 DYNC1H1Q14204 4646 aaKnown RBP1.29□□□□□ -2.2
SNX13-211ENST00000496855 DNAH7Q8WXX0 4024 aa1.29□□□□□ -2.2
SNX13-211ENST00000496855 PLCE1Q9P212 2302 aa1.29□□□□□ -2.2
SNX13-211ENST00000496855 MYCBP2O75592 4640 aa1.29□□□□□ -2.2
SNX13-211ENST00000496855 KRTAP20-1Q3LI63 56 aa1.29□□□□□ -2.2
SNX13-211ENST00000496855 TP53AIP1Q9HCN2 124 aa1.29□□□□□ -2.2
SNX13-211ENST00000496855 HRNRQ86YZ3 2850 aaPredicted RBP1.28□□□□□ -2.2
SNX13-211ENST00000496855 GAFA1Q96PS6 74 aa1.28□□□□□ -2.2
SNX13-211ENST00000496855 FAT2Q9NYQ8 4349 aa1.28□□□□□ -2.2
SNX13-211ENST00000496855 WNK2Q9Y3S1 2297 aa1.27□□□□□ -2.21
SNX13-211ENST00000496855 LRP2P98164 4655 aa1.27□□□□□ -2.21
SNX13-211ENST00000496855 WFDC9Q8NEX5 89 aa1.26□□□□□ -2.21
SNX13-211ENST00000496855 DNAH10Q8IVF4 4471 aa1.26□□□□□ -2.21
SNX13-211ENST00000496855 STARD9Q9P2P6 4700 aa1.25□□□□□ -2.21
SNX13-211ENST00000496855 PLECQ15149 4684 aaKnown RBP1.25□□□□□ -2.21
SNX13-211ENST00000496855 H3BVH4 76 aa1.24□□□□□ -2.21
SNX13-211ENST00000496855 COX8AP10176 69 aa1.24□□□□□ -2.21
SNX13-211ENST00000496855 COX7BP24311 80 aa1.24□□□□□ -2.21
SNX13-211ENST00000496855 CNFNQ9BYD5 112 aa1.24□□□□□ -2.21
SNX13-211ENST00000496855 SYNE2Q8WXH0 6885 aaKnown RBP1.24□□□□□ -2.21
SNX13-211ENST00000496855 A0A0D9SFI3 127 aa1.24□□□□□ -2.21
SNX13-211ENST00000496855 NREPQ16612 68 aa1.24□□□□□ -2.21
SNX13-211ENST00000496855 K7EQZ3 153 aa1.23□□□□□ -2.21
SNX13-211ENST00000496855 NDUFB1O75438 58 aa1.23□□□□□ -2.21
SNX13-211ENST00000496855 LELP1Q5T871 98 aa1.23□□□□□ -2.21
SNX13-211ENST00000496855 MUC5BQ9HC84 5762 aaPredicted RBP1.22□□□□□ -2.21
SNX13-211ENST00000496855 FAT1Q14517 4588 aa1.22□□□□□ -2.21
SNX13-211ENST00000496855 PRO0255Q9UI72 69 aa1.22□□□□□ -2.21
SNX13-211ENST00000496855 Q9Y3F1 56 aa1.22□□□□□ -2.21
SNX13-211ENST00000496855 A0A087WWC5 75 aa1.21□□□□□ -2.22
SNX13-211ENST00000496855 COX6A2Q02221 97 aa1.21□□□□□ -2.22
SNX13-211ENST00000496855 FXYD6-FXYD2A0A087WZ82 144 aa1.2□□□□□ -2.22
SNX13-211ENST00000496855 ALMS1Q8TCU4 4167 aa1.2□□□□□ -2.22
SNX13-211ENST00000496855 MACF1Q9UPN3 7388 aaKnown RBP1.2□□□□□ -2.22
SNX13-211ENST00000496855 APOBP04114 4563 aaKnown RBP1.19□□□□□ -2.22
SNX13-211ENST00000496855 DEFB109BQ30KR1 87 aa1.19□□□□□ -2.22
SNX13-211ENST00000496855 DNAH11Q96DT5 4516 aa1.19□□□□□ -2.22
SNX13-211ENST00000496855 PIGYQ3MUY2 71 aa1.18□□□□□ -2.22
SNX13-211ENST00000496855 VPS13DQ5THJ4 4388 aa1.18□□□□□ -2.22
SNX13-211ENST00000496855 DNAH3Q8TD57 4116 aa1.18□□□□□ -2.22
SNX13-211ENST00000496855 PKHD1L1Q86WI1 4243 aa1.18□□□□□ -2.22
SNX13-211ENST00000496855 Q8IZM0 81 aa1.18□□□□□ -2.22
SNX13-211ENST00000496855 DNAH6Q9C0G6 4158 aa1.17□□□□□ -2.22
SNX13-211ENST00000496855 FAT3Q8TDW7 4589 aa1.17□□□□□ -2.22
SNX13-211ENST00000496855 CPSF4LA6NMK7 179 aaKnown RBP1.17□□□□□ -2.22
SNX13-211ENST00000496855 KMT2DO14686 5537 aa1.17□□□□□ -2.22
SNX13-211ENST00000496855 C3orf79P0CE67 100 aa1.17□□□□□ -2.22
SNX13-211ENST00000496855 AHNAK2Q8IVF2 5795 aa1.17□□□□□ -2.22
SNX13-211ENST00000496855 SPTY2D1-AS1A0A0U1RR47 76 aa1.16□□□□□ -2.22
SNX13-211ENST00000496855 CD52P31358 61 aa1.16□□□□□ -2.22
SNX13-211ENST00000496855 PKD1P98161 4303 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms