RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 MTURNQ8N3F0 131 aa9.49□□□□□ -0.89
COL20A1-207ENST00000494913 LOC110117498A0A087WWA1 95 aa9.48□□□□□ -0.89
COL20A1-207ENST00000494913 IGKV4-1P06312 121 aa9.48□□□□□ -0.89
COL20A1-207ENST00000494913 A0A1B0GW54 56 aa9.47□□□□□ -0.89
COL20A1-207ENST00000494913 PRO0461Q9UI25 63 aa9.47□□□□□ -0.89
COL20A1-207ENST00000494913 MT1HP80294 61 aa9.46□□□□□ -0.9
COL20A1-207ENST00000494913 Q6ZQT0 140 aa9.46□□□□□ -0.9
COL20A1-207ENST00000494913 C14orf132Q9NPU4 83 aa9.46□□□□□ -0.9
COL20A1-207ENST00000494913 SMCPP49901 116 aaPredicted RBP9.45□□□□□ -0.9
COL20A1-207ENST00000494913 LINC00472Q9H8W2 130 aa9.44□□□□□ -0.9
COL20A1-207ENST00000494913 DSCR10P59022 87 aa9.41□□□□□ -0.9
COL20A1-207ENST00000494913 DEFB116Q30KQ4 102 aa9.41□□□□□ -0.9
COL20A1-207ENST00000494913 COX6B2Q6YFQ2 88 aa9.41□□□□□ -0.9
COL20A1-207ENST00000494913 C20orf166-AS1Q96NR2 134 aa9.41□□□□□ -0.9
COL20A1-207ENST00000494913 J3KT08 172 aa9.4□□□□□ -0.9
COL20A1-207ENST00000494913 SCGB1A1P11684 91 aa9.4□□□□□ -0.91
COL20A1-207ENST00000494913 A8MUU9 505 aa9.39□□□□□ -0.91
COL20A1-207ENST00000494913 LINC00313P59037 77 aa9.39□□□□□ -0.91
COL20A1-207ENST00000494913 IGHV6-1A0A0B4J1U7 121 aa9.35□□□□□ -0.91
COL20A1-207ENST00000494913 NDUFB1O75438 58 aa9.35□□□□□ -0.91
COL20A1-207ENST00000494913 ETDBQ3ZM63 59 aa9.35□□□□□ -0.91
COL20A1-207ENST00000494913 NREPQ16612 68 aa9.34□□□□□ -0.91
COL20A1-207ENST00000494913 C8orf87E5RJ46 101 aa9.33□□□□□ -0.92
COL20A1-207ENST00000494913 M0R2T5 61 aa9.32□□□□□ -0.92
COL20A1-207ENST00000494913 A0A1B0GVX0 72 aa9.31□□□□□ -0.92
COL20A1-207ENST00000494913 NOTCH2NLQ7Z3S9 236 aa9.31□□□□□ -0.92
COL20A1-207ENST00000494913 LCE2DQ5TA82 110 aaPredicted RBP9.29□□□□□ -0.92
COL20A1-207ENST00000494913 KRTAP16-1A8MUX0 517 aa9.28□□□□□ -0.92
COL20A1-207ENST00000494913 FLGP20930 4061 aaPredicted RBP9.27□□□□□ -0.92
COL20A1-207ENST00000494913 KRTAP10-6P60371 365 aaPredicted RBP9.27□□□□□ -0.93
COL20A1-207ENST00000494913 A8MWP4 228 aa9.26□□□□□ -0.93
COL20A1-207ENST00000494913 LORP23490 312 aaPredicted RBP9.26□□□□□ -0.93
COL20A1-207ENST00000494913 KRTAP9-6A0A140TA67 174 aa9.22□□□□□ -0.93
COL20A1-207ENST00000494913 BPY2O14599 106 aa9.19□□□□□ -0.94
COL20A1-207ENST00000494913 IGKV3D-7A0A0C4DH55 119 aa9.18□□□□□ -0.94
COL20A1-207ENST00000494913 C8orf17Q9NRJ1 99 aa9.18□□□□□ -0.94
COL20A1-207ENST00000494913 PRR15Q8IV56 129 aa9.17□□□□□ -0.94
COL20A1-207ENST00000494913 UBL5Q9BZL1 73 aa9.15□□□□□ -0.94
COL20A1-207ENST00000494913 Q6ZVQ6 151 aa9.15□□□□□ -0.95
COL20A1-207ENST00000494913 FSIP2Q5CZC0 6907 aa9.13□□□□□ -0.95
COL20A1-207ENST00000494913 FAM240AA0A1B0GVK7 77 aa9.13□□□□□ -0.95
COL20A1-207ENST00000494913 LINC00846Q9NV44 126 aa9.11□□□□□ -0.95
COL20A1-207ENST00000494913 K7EQZ3 153 aa9.09□□□□□ -0.95
COL20A1-207ENST00000494913 Q8N9P0 234 aaPredicted RBP9.08□□□□□ -0.96
COL20A1-207ENST00000494913 FAM236DA0A1B0GTK5 79 aa9.08□□□□□ -0.96
COL20A1-207ENST00000494913 FAM236CP0DP71 79 aa9.08□□□□□ -0.96
COL20A1-207ENST00000494913 MT-ATP8P03928 68 aa9.07□□□□□ -0.96
COL20A1-207ENST00000494913 ACYP1P07311 99 aa9.07□□□□□ -0.96
COL20A1-207ENST00000494913 HRES1P13985 223 aa9.07□□□□□ -0.96
COL20A1-207ENST00000494913 TMEM254Q8TBM7 123 aa9.07□□□□□ -0.96
COL20A1-207ENST00000494913 ZCCHC13Q8WW36 166 aaKnown RBP9.07□□□□□ -0.96
COL20A1-207ENST00000494913 hDV103S1A0JD37 113 aa9.06□□□□□ -0.96
COL20A1-207ENST00000494913 MRPL34Q9BQ48 92 aaKnown RBP9.06□□□□□ -0.96
COL20A1-207ENST00000494913 CRCT1Q9UGL9 99 aa9.06□□□□□ -0.96
COL20A1-207ENST00000494913 MMP24-AS1A0A0U1RRL7 71 aa9.05□□□□□ -0.96
COL20A1-207ENST00000494913 RBM12B-AS1Q9P1G2 102 aa9.05□□□□□ -0.96
COL20A1-207ENST00000494913 MPLKIPQ8TAP9 179 aa9.04□□□□□ -0.96
COL20A1-207ENST00000494913 NDUFS5O43920 106 aa9.02□□□□□ -0.96
COL20A1-207ENST00000494913 SPINK7P58062 85 aa8.99□□□□□ -0.97
COL20A1-207ENST00000494913 Q8N9L7 120 aa8.99□□□□□ -0.97
COL20A1-207ENST00000494913 CASC2Q6XLA1 102 aa8.98□□□□□ -0.97
COL20A1-207ENST00000494913 WFDC13Q8IUB5 93 aa8.97□□□□□ -0.97
COL20A1-207ENST00000494913 IMUPQ9GZP8 106 aa8.96□□□□□ -0.97
COL20A1-207ENST00000494913 KRTAP9-8Q9BYQ0 159 aa8.96□□□□□ -0.98
COL20A1-207ENST00000494913 ANAPC13Q9BS18 74 aa8.95□□□□□ -0.98
COL20A1-207ENST00000494913 CXCL6P80162 114 aa8.94□□□□□ -0.98
COL20A1-207ENST00000494913 HCG22E2RYF7 251 aa8.92□□□□□ -0.98
COL20A1-207ENST00000494913 LINC00643Q86TS7 51 aa8.91□□□□□ -0.98
COL20A1-207ENST00000494913 ATP5EP2Q5VTU8 51 aa8.87□□□□□ -0.99
COL20A1-207ENST00000494913 MT2AP02795 61 aa8.83□□□□□ -1
COL20A1-207ENST00000494913 IGKV2D-30A0A075B6S6 120 aa8.79□□□□□ -1
COL20A1-207ENST00000494913 IGKV2-30P06310 120 aa8.79□□□□□ -1
COL20A1-207ENST00000494913 C7orf65Q6ZTY9 151 aa8.79□□□□□ -1
COL20A1-207ENST00000494913 TP53AIP1Q9HCN2 124 aa8.78□□□□□ -1
COL20A1-207ENST00000494913 Q5W150 140 aa8.77□□□□□ -1
COL20A1-207ENST00000494913 MT1FP04733 61 aa8.77□□□□□ -1.01
COL20A1-207ENST00000494913 KRTAP10-10P60014 251 aa8.75□□□□□ -1.01
COL20A1-207ENST00000494913 HIST1H4AP62805 103 aaKnown RBP8.75□□□□□ -1.01
COL20A1-207ENST00000494913 FAM236AA0A1B0GUQ0 79 aa8.73□□□□□ -1.01
COL20A1-207ENST00000494913 FAM236BA0A1B0GV22 79 aa8.73□□□□□ -1.01
COL20A1-207ENST00000494913 USH2AO75445 5202 aa8.73□□□□□ -1.01
COL20A1-207ENST00000494913 ATOX1O00244 68 aa8.7□□□□□ -1.02
COL20A1-207ENST00000494913 CCDC179H3BU77 68 aa8.7□□□□□ -1.02
COL20A1-207ENST00000494913 UQCRQO14949 82 aa8.68□□□□□ -1.02
COL20A1-207ENST00000494913 KRTAP9-3Q9BYQ3 159 aa8.68□□□□□ -1.02
COL20A1-207ENST00000494913 H1FX-AS1Q4G0G2 97 aa8.66□□□□□ -1.02
COL20A1-207ENST00000494913 SSPOA2VEC9 5147 aa8.65□□□□□ -1.02
COL20A1-207ENST00000494913 A0A087WVE0 104 aa8.65□□□□□ -1.02
COL20A1-207ENST00000494913 LCE2BO14633 110 aa8.63□□□□□ -1.03
COL20A1-207ENST00000494913 COX7CP15954 63 aa8.63□□□□□ -1.03
COL20A1-207ENST00000494913 TRAV22A0A0B4J277 110 aa8.59□□□□□ -1.03
COL20A1-207ENST00000494913 C4orf26Q17RF5 130 aa8.57□□□□□ -1.04
COL20A1-207ENST00000494913 SERP2Q8N6R1 65 aa8.57□□□□□ -1.04
COL20A1-207ENST00000494913 LOC101927531A0A1B0GV80 90 aa8.53□□□□□ -1.04
COL20A1-207ENST00000494913 SMIM20Q8N5G0 67 aa8.51□□□□□ -1.05
COL20A1-207ENST00000494913 H0Y9P7 68 aa8.49□□□□□ -1.05
COL20A1-207ENST00000494913 CYP4F30PQ9H0H9 118 aa8.49□□□□□ -1.05
COL20A1-207ENST00000494913 TMEM258P61165 79 aa8.47□□□□□ -1.05
COL20A1-207ENST00000494913 KRTAP19-1Q8IUB9 90 aa8.47□□□□□ -1.05
COL20A1-207ENST00000494913 C1orf64Q8NEQ6 169 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms