RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 DNAH3Q8TD57 4116 aa5.98□□□□□ -1.45
LINC00488-201ENST00000494582 DNAH8Q96JB1 4490 aa5.98□□□□□ -1.45
LINC00488-201ENST00000494582 MIR22HGQ0VDD5 57 aa5.98□□□□□ -1.45
LINC00488-201ENST00000494582 DMAC1Q96GE9 116 aa5.97□□□□□ -1.45
LINC00488-201ENST00000494582 COL6A5A8TX70 2615 aa5.97□□□□□ -1.45
LINC00488-201ENST00000494582 NOTCH1P46531 2555 aa5.97□□□□□ -1.45
LINC00488-201ENST00000494582 HUWE1Q7Z6Z7 4374 aaKnown RBP5.97□□□□□ -1.45
LINC00488-201ENST00000494582 RETNLBQ9BQ08 111 aa5.96□□□□□ -1.45
LINC00488-201ENST00000494582 ANAPC11Q9NYG5 84 aa5.96□□□□□ -1.45
LINC00488-201ENST00000494582 INAFM1C9JVW0 142 aa5.95□□□□□ -1.46
LINC00488-201ENST00000494582 CDK2AP2O75956 126 aa5.95□□□□□ -1.46
LINC00488-201ENST00000494582 DNAH7Q8WXX0 4024 aa5.95□□□□□ -1.46
LINC00488-201ENST00000494582 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
LINC00488-201ENST00000494582 KRTAP4-6Q9BYQ5 205 aa5.94□□□□□ -1.46
LINC00488-201ENST00000494582 UQCR11O14957 56 aa5.92□□□□□ -1.46
LINC00488-201ENST00000494582 SPINK6Q6UWN8 80 aa5.92□□□□□ -1.46
LINC00488-201ENST00000494582 ZNF861PO60384 105 aa5.92□□□□□ -1.46
LINC00488-201ENST00000494582 WWC2-AS2Q96NR7 200 aa5.92□□□□□ -1.46
LINC00488-201ENST00000494582 KMT2BQ9UMN6 2715 aaPredicted RBP5.92□□□□□ -1.46
LINC00488-201ENST00000494582 LINC00483Q53H64 154 aa5.91□□□□□ -1.46
LINC00488-201ENST00000494582 STAB1Q9NY15 2570 aa5.87□□□□□ -1.47
LINC00488-201ENST00000494582 C1orf134Q5TEV5 83 aa5.86□□□□□ -1.47
LINC00488-201ENST00000494582 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.86□□□□□ -1.47
LINC00488-201ENST00000494582 MEGF8Q7Z7M0 2845 aa5.86□□□□□ -1.47
LINC00488-201ENST00000494582 DNAH17Q9UFH2 4485 aa5.85□□□□□ -1.47
LINC00488-201ENST00000494582 IGKV2-30P06310 120 aa5.83□□□□□ -1.48
LINC00488-201ENST00000494582 HECTD4Q9Y4D8 3996 aa5.83□□□□□ -1.48
LINC00488-201ENST00000494582 KRTAP3-3Q9BYR6 98 aa5.83□□□□□ -1.48
LINC00488-201ENST00000494582 KRTAP3-2Q9BYR7 98 aa5.83□□□□□ -1.48
LINC00488-201ENST00000494582 STAB2Q8WWQ8 2551 aa5.82□□□□□ -1.48
LINC00488-201ENST00000494582 IGLV7-43P04211 117 aa5.81□□□□□ -1.48
LINC00488-201ENST00000494582 PLECQ15149 4684 aaKnown RBP5.8□□□□□ -1.48
LINC00488-201ENST00000494582 SPACA4Q8TDM5 124 aa5.79□□□□□ -1.48
LINC00488-201ENST00000494582 PSORS1C2Q9UIG4 136 aa5.79□□□□□ -1.48
LINC00488-201ENST00000494582 VPS13DQ5THJ4 4388 aa5.79□□□□□ -1.48
LINC00488-201ENST00000494582 C14orf177Q52M58 125 aa5.79□□□□□ -1.48
LINC00488-201ENST00000494582 FAM229AH3BQW9 127 aa5.78□□□□□ -1.48
LINC00488-201ENST00000494582 ROMO1P60602 79 aa5.78□□□□□ -1.48
LINC00488-201ENST00000494582 KRTAP25-1Q3LHN0 102 aa5.77□□□□□ -1.49
LINC00488-201ENST00000494582 CIRBP-AS1Q8TBR5 109 aa5.77□□□□□ -1.49
LINC00488-201ENST00000494582 ZNF706Q9Y5V0 76 aaPredicted RBP5.77□□□□□ -1.49
LINC00488-201ENST00000494582 DYNC2H1Q8NCM8 4307 aaKnown RBP5.77□□□□□ -1.49
LINC00488-201ENST00000494582 A8MUU9 505 aa5.76□□□□□ -1.49
LINC00488-201ENST00000494582 IGKV2D-30A0A075B6S6 120 aa5.75□□□□□ -1.49
LINC00488-201ENST00000494582 H0YAA0 97 aa5.75□□□□□ -1.49
LINC00488-201ENST00000494582 IGLV5-52A0A0A0MRZ9 124 aa5.75□□□□□ -1.49
LINC00488-201ENST00000494582 SPINK1P00995 79 aa5.75□□□□□ -1.49
LINC00488-201ENST00000494582 LINC00304Q8N9R0 145 aa5.75□□□□□ -1.49
LINC00488-201ENST00000494582 TGP01266 2768 aa5.74□□□□□ -1.49
LINC00488-201ENST00000494582 FLG2Q5D862 2391 aaPredicted RBP5.74□□□□□ -1.49
LINC00488-201ENST00000494582 UBE2DNLQ8IWF7 75 aa5.74□□□□□ -1.49
LINC00488-201ENST00000494582 Q6ZSA8 131 aa5.73□□□□□ -1.49
LINC00488-201ENST00000494582 KRTAP16-1A8MUX0 517 aa5.73□□□□□ -1.49
LINC00488-201ENST00000494582 Q6ZRN7 208 aaPredicted RBP5.73□□□□□ -1.49
LINC00488-201ENST00000494582 CRIPTQ9P021 101 aa5.71□□□□□ -1.5
LINC00488-201ENST00000494582 P0C880 135 aa5.71□□□□□ -1.5
LINC00488-201ENST00000494582 APLNQ9ULZ1 77 aa5.7□□□□□ -1.5
LINC00488-201ENST00000494582 Q8N1X5 172 aa5.69□□□□□ -1.5
LINC00488-201ENST00000494582 DNAH2Q9P225 4427 aa5.68□□□□□ -1.5
LINC00488-201ENST00000494582 KMT2AQ03164 3969 aa5.67□□□□□ -1.5
LINC00488-201ENST00000494582 TYMSOSQ8TAI1 123 aa5.67□□□□□ -1.5
LINC00488-201ENST00000494582 FBN3Q75N90 2809 aa5.67□□□□□ -1.5
LINC00488-201ENST00000494582 LY6G6CO95867 125 aa5.66□□□□□ -1.5
LINC00488-201ENST00000494582 NBDYA0A0U1RRE5 68 aa5.66□□□□□ -1.5
LINC00488-201ENST00000494582 KRTAP24-1Q3LI83 254 aa5.65□□□□□ -1.5
LINC00488-201ENST00000494582 DNAH11Q96DT5 4516 aa5.64□□□□□ -1.51
LINC00488-201ENST00000494582 STARD9Q9P2P6 4700 aa5.63□□□□□ -1.51
LINC00488-201ENST00000494582 DNAH6Q9C0G6 4158 aa5.62□□□□□ -1.51
LINC00488-201ENST00000494582 MGAM2Q2M2H8 2515 aa5.61□□□□□ -1.51
LINC00488-201ENST00000494582 A0A087WTM6 91 aa5.6□□□□□ -1.51
LINC00488-201ENST00000494582 KRTAP13-2Q52LG2 175 aa5.6□□□□□ -1.51
LINC00488-201ENST00000494582 SSBP3-AS1Q7Z2R9 100 aa5.6□□□□□ -1.51
LINC00488-201ENST00000494582 J3QKU1 62 aa5.58□□□□□ -1.52
LINC00488-201ENST00000494582 A0A1B0GU33 70 aa5.58□□□□□ -1.52
LINC00488-201ENST00000494582 PRKDCP78527 4128 aaKnown RBP5.56□□□□□ -1.52
LINC00488-201ENST00000494582 H1FX-AS1Q4G0G2 97 aa5.55□□□□□ -1.52
LINC00488-201ENST00000494582 LRP1BQ9NZR2 4599 aa5.54□□□□□ -1.52
LINC00488-201ENST00000494582 DNAH5Q8TE73 4624 aa5.54□□□□□ -1.52
LINC00488-201ENST00000494582 KRTAP3-1Q9BYR8 98 aa5.53□□□□□ -1.52
LINC00488-201ENST00000494582 TPRXLQ17RH7 258 aa5.48□□□□□ -1.53
LINC00488-201ENST00000494582 COX6B2Q6YFQ2 88 aa5.46□□□□□ -1.54
LINC00488-201ENST00000494582 VPS13BQ7Z7G8 4022 aa5.45□□□□□ -1.54
LINC00488-201ENST00000494582 KRTAP1-4P0C5Y4 121 aa5.44□□□□□ -1.54
LINC00488-201ENST00000494582 SPINT4Q6UDR6 99 aa5.43□□□□□ -1.54
LINC00488-201ENST00000494582 NDUFAF8A1L188 74 aa5.42□□□□□ -1.54
LINC00488-201ENST00000494582 XP32Q5T750 250 aa5.42□□□□□ -1.54
LINC00488-201ENST00000494582 C10orf95Q9H7T3 257 aa5.42□□□□□ -1.54
LINC00488-201ENST00000494582 K7ERS5 55 aa5.4□□□□□ -1.55
LINC00488-201ENST00000494582 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.55
LINC00488-201ENST00000494582 FAT2Q9NYQ8 4349 aa5.39□□□□□ -1.55
LINC00488-201ENST00000494582 NUPR2A6NF83 97 aa5.38□□□□□ -1.55
LINC00488-201ENST00000494582 KRTAP13-4Q3LI77 160 aa5.38□□□□□ -1.55
LINC00488-201ENST00000494582 DMBT1Q9UGM3 2413 aaPredicted RBP5.38□□□□□ -1.55
LINC00488-201ENST00000494582 KRTAP10-2P60368 255 aa5.37□□□□□ -1.55
LINC00488-201ENST00000494582 C20orf166-AS1Q96NR2 134 aa5.37□□□□□ -1.55
LINC00488-201ENST00000494582 PKD1P98161 4303 aa5.36□□□□□ -1.55
LINC00488-201ENST00000494582 A0A0D9SG42 100 aa5.34□□□□□ -1.56
LINC00488-201ENST00000494582 C9orf92A6NGG3 77 aa5.34□□□□□ -1.56
LINC00488-201ENST00000494582 KRTAP10-6P60371 365 aaPredicted RBP5.33□□□□□ -1.56
LINC00488-201ENST00000494582 RPL37P61927 97 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms