RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 ALMS1Q8TCU4 4167 aa4.18□□□□□ -1.74
VPS13B-205ENST00000493587 IGLV5-52A0A0A0MRZ9 124 aa4.18□□□□□ -1.74
VPS13B-205ENST00000493587 C8orf17Q9NRJ1 99 aa4.18□□□□□ -1.74
VPS13B-205ENST00000493587 PKD1P98161 4303 aa4.17□□□□□ -1.74
VPS13B-205ENST00000493587 DNAH8Q96JB1 4490 aa4.17□□□□□ -1.74
VPS13B-205ENST00000493587 STAB1Q9NY15 2570 aa4.17□□□□□ -1.74
VPS13B-205ENST00000493587 TENM3Q9P273 2699 aa4.17□□□□□ -1.74
VPS13B-205ENST00000493587 KRTAP10-11P60412 298 aa4.17□□□□□ -1.74
VPS13B-205ENST00000493587 SPINK1P00995 79 aa4.16□□□□□ -1.74
VPS13B-205ENST00000493587 LINC00472Q9H8W2 130 aa4.16□□□□□ -1.74
VPS13B-205ENST00000493587 PRR34Q9NV39 138 aa4.16□□□□□ -1.74
VPS13B-205ENST00000493587 FBN3Q75N90 2809 aa4.16□□□□□ -1.74
VPS13B-205ENST00000493587 K7EIL1 84 aa4.16□□□□□ -1.74
VPS13B-205ENST00000493587 DNHD1Q96M86 4753 aa4.16□□□□□ -1.74
VPS13B-205ENST00000493587 C20orf166-AS1Q96NR2 134 aa4.15□□□□□ -1.74
VPS13B-205ENST00000493587 MRPL34Q9BQ48 92 aaKnown RBP4.15□□□□□ -1.75
VPS13B-205ENST00000493587 KMT2AQ03164 3969 aa4.15□□□□□ -1.75
VPS13B-205ENST00000493587 C15orf56Q8N910 161 aa4.15□□□□□ -1.75
VPS13B-205ENST00000493587 DEFB135Q30KP9 77 aa4.14□□□□□ -1.75
VPS13B-205ENST00000493587 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
VPS13B-205ENST00000493587 DNAH11Q96DT5 4516 aa4.14□□□□□ -1.75
VPS13B-205ENST00000493587 CASC10Q5T4H9 136 aa4.14□□□□□ -1.75
VPS13B-205ENST00000493587 K7ERS5 55 aa4.13□□□□□ -1.75
VPS13B-205ENST00000493587 FAT2Q9NYQ8 4349 aa4.12□□□□□ -1.75
VPS13B-205ENST00000493587 KRTAP4-16G5E9R7 235 aaPredicted RBP4.12□□□□□ -1.75
VPS13B-205ENST00000493587 KRTAP26-1Q6PEX3 210 aa4.12□□□□□ -1.75
VPS13B-205ENST00000493587 DMAC1Q96GE9 116 aa4.12□□□□□ -1.75
VPS13B-205ENST00000493587 NBEAL1Q6ZS30 2694 aa4.12□□□□□ -1.75
VPS13B-205ENST00000493587 SPINK6Q6UWN8 80 aa4.12□□□□□ -1.75
VPS13B-205ENST00000493587 IGLV7-43P04211 117 aa4.12□□□□□ -1.75
VPS13B-205ENST00000493587 SPRR1AP35321 89 aa4.12□□□□□ -1.75
VPS13B-205ENST00000493587 IGLV9-49A0A0B4J1Y8 123 aa4.11□□□□□ -1.75
VPS13B-205ENST00000493587 LINC00304Q8N9R0 145 aa4.1□□□□□ -1.75
VPS13B-205ENST00000493587 TLX1NBP0CAT3 122 aa4.1□□□□□ -1.75
VPS13B-205ENST00000493587 DNAH5Q8TE73 4624 aa4.1□□□□□ -1.75
VPS13B-205ENST00000493587 A0A1B0GVX0 72 aa4.09□□□□□ -1.75
VPS13B-205ENST00000493587 COL6A5A8TX70 2615 aa4.09□□□□□ -1.75
VPS13B-205ENST00000493587 DMBT1Q9UGM3 2413 aaPredicted RBP4.09□□□□□ -1.76
VPS13B-205ENST00000493587 SPART-AS1P0CW21 52 aa4.08□□□□□ -1.76
VPS13B-205ENST00000493587 NUPR2A6NF83 97 aa4.08□□□□□ -1.76
VPS13B-205ENST00000493587 NOTCH2NLQ7Z3S9 236 aa4.08□□□□□ -1.76
VPS13B-205ENST00000493587 CHTF8P0CG12 524 aa4.07□□□□□ -1.76
VPS13B-205ENST00000493587 Q5W150 140 aa4.07□□□□□ -1.76
VPS13B-205ENST00000493587 NOTCH1P46531 2555 aa4.06□□□□□ -1.76
VPS13B-205ENST00000493587 PLA2G2DQ9UNK4 145 aa4.05□□□□□ -1.76
VPS13B-205ENST00000493587 PKHD1L1Q86WI1 4243 aa4.05□□□□□ -1.76
VPS13B-205ENST00000493587 PKHD1P08F94 4074 aa4.05□□□□□ -1.76
VPS13B-205ENST00000493587 H3BNG1 76 aa4.04□□□□□ -1.76
VPS13B-205ENST00000493587 IGKV2D-30A0A075B6S6 120 aa4.04□□□□□ -1.76
VPS13B-205ENST00000493587 IGKV2-30P06310 120 aa4.04□□□□□ -1.76
VPS13B-205ENST00000493587 MEGF8Q7Z7M0 2845 aa4.03□□□□□ -1.76
VPS13B-205ENST00000493587 PSORS1C2Q9UIG4 136 aa4.03□□□□□ -1.76
VPS13B-205ENST00000493587 HYDINQ4G0P3 5121 aa4.03□□□□□ -1.77
VPS13B-205ENST00000493587 KRTAP11-1Q8IUC1 163 aa4.01□□□□□ -1.77
VPS13B-205ENST00000493587 LY6G6CO95867 125 aa4.01□□□□□ -1.77
VPS13B-205ENST00000493587 KRTAP7-1Q8IUC3 87 aa4.01□□□□□ -1.77
VPS13B-205ENST00000493587 A0A087WTM6 91 aa4□□□□□ -1.77
VPS13B-205ENST00000493587 SRRM2Q9UQ35 2752 aaKnown RBP3.99□□□□□ -1.77
VPS13B-205ENST00000493587 A0A1B0GU33 70 aa3.99□□□□□ -1.77
VPS13B-205ENST00000493587 H0YAA0 97 aa3.98□□□□□ -1.77
VPS13B-205ENST00000493587 Q96NJ1 140 aa3.98□□□□□ -1.77
VPS13B-205ENST00000493587 MGAM2Q2M2H8 2515 aa3.98□□□□□ -1.77
VPS13B-205ENST00000493587 FAM229AH3BQW9 127 aa3.98□□□□□ -1.77
VPS13B-205ENST00000493587 VPS13BQ7Z7G8 4022 aa3.97□□□□□ -1.77
VPS13B-205ENST00000493587 PANO1I0J062 215 aa3.97□□□□□ -1.77
VPS13B-205ENST00000493587 Q6ZSA8 131 aa3.96□□□□□ -1.78
VPS13B-205ENST00000493587 STAB2Q8WWQ8 2551 aa3.96□□□□□ -1.78
VPS13B-205ENST00000493587 C14orf177Q52M58 125 aa3.96□□□□□ -1.78
VPS13B-205ENST00000493587 SACSQ9NZJ4 4579 aa3.96□□□□□ -1.78
VPS13B-205ENST00000493587 SEC61BP60468 96 aaKnown RBP3.96□□□□□ -1.78
VPS13B-205ENST00000493587 LINC01556Q5JQF7 62 aa3.95□□□□□ -1.78
VPS13B-205ENST00000493587 Q8N1X5 172 aa3.95□□□□□ -1.78
VPS13B-205ENST00000493587 SPRR1BP22528 89 aa3.94□□□□□ -1.78
VPS13B-205ENST00000493587 TENM2Q9NT68 2774 aa3.94□□□□□ -1.78
VPS13B-205ENST00000493587 C10orf95Q9H7T3 257 aa3.93□□□□□ -1.78
VPS13B-205ENST00000493587 KRTAP15-1Q3LI76 137 aa3.91□□□□□ -1.78
VPS13B-205ENST00000493587 NBDYA0A0U1RRE5 68 aa3.9□□□□□ -1.78
VPS13B-205ENST00000493587 CIRBP-AS1Q8TBR5 109 aa3.9□□□□□ -1.79
VPS13B-205ENST00000493587 KRTAP1-5Q9BYS1 174 aa3.9□□□□□ -1.79
VPS13B-205ENST00000493587 ANAPC11Q9NYG5 84 aa3.9□□□□□ -1.79
VPS13B-205ENST00000493587 KRTAP13-3Q3SY46 172 aa3.9□□□□□ -1.79
VPS13B-205ENST00000493587 H1FX-AS1Q4G0G2 97 aa3.9□□□□□ -1.79
VPS13B-205ENST00000493587 TYMSOSQ8TAI1 123 aa3.89□□□□□ -1.79
VPS13B-205ENST00000493587 TPRXLQ17RH7 258 aa3.88□□□□□ -1.79
VPS13B-205ENST00000493587 APOBP04114 4563 aaKnown RBP3.88□□□□□ -1.79
VPS13B-205ENST00000493587 A0A0D9SG42 100 aa3.87□□□□□ -1.79
VPS13B-205ENST00000493587 APLNQ9ULZ1 77 aa3.87□□□□□ -1.79
VPS13B-205ENST00000493587 Q6ZRN7 208 aaPredicted RBP3.85□□□□□ -1.79
VPS13B-205ENST00000493587 LRP1BQ9NZR2 4599 aa3.84□□□□□ -1.79
VPS13B-205ENST00000493587 FAT3Q8TDW7 4589 aa3.83□□□□□ -1.8
VPS13B-205ENST00000493587 RPL37P61927 97 aaKnown RBP3.82□□□□□ -1.8
VPS13B-205ENST00000493587 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.82□□□□□ -1.8
VPS13B-205ENST00000493587 HSPG2P98160 4391 aa3.82□□□□□ -1.8
VPS13B-205ENST00000493587 KRTAP21-3Q3LHN1 58 aa3.81□□□□□ -1.8
VPS13B-205ENST00000493587 TNXBP22105 4242 aa3.8□□□□□ -1.8
VPS13B-205ENST00000493587 KRTAP13-1Q8IUC0 172 aa3.8□□□□□ -1.8
VPS13B-205ENST00000493587 TGP01266 2768 aa3.79□□□□□ -1.8
VPS13B-205ENST00000493587 WWC2-AS2Q96NR7 200 aa3.79□□□□□ -1.8
VPS13B-205ENST00000493587 DYNC1H1Q14204 4646 aaKnown RBP3.79□□□□□ -1.8
VPS13B-205ENST00000493587 RYR2Q92736 4967 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms