RNA–Protein interactions for RNA: ENST00000493306.1

KLF4-204, Transcript of Kruppel like factor 4, humanhuman

TSL 1 (best)

Gene KLF4, Length 2,706 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-204ENST00000493306 DNAH3Q8TD57 4116 aa9.76□□□□□ -0.85
KLF4-204ENST00000493306 SPINK6Q6UWN8 80 aa9.76□□□□□ -0.85
KLF4-204ENST00000493306 SPACA4Q8TDM5 124 aa9.76□□□□□ -0.85
KLF4-204ENST00000493306 CMYA5Q8N3K9 4069 aa9.76□□□□□ -0.85
KLF4-204ENST00000493306 KRTAP13-3Q3SY46 172 aa9.75□□□□□ -0.85
KLF4-204ENST00000493306 APLNQ9ULZ1 77 aa9.75□□□□□ -0.85
KLF4-204ENST00000493306 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.75□□□□□ -0.85
KLF4-204ENST00000493306 CSMD3Q7Z407 3707 aa9.75□□□□□ -0.85
KLF4-204ENST00000493306 LYSTQ99698 3801 aa9.73□□□□□ -0.85
KLF4-204ENST00000493306 ADM2Q7Z4H4 148 aa9.73□□□□□ -0.85
KLF4-204ENST00000493306 ANAPC11Q9NYG5 84 aa9.73□□□□□ -0.85
KLF4-204ENST00000493306 DNAH9Q9NYC9 4486 aa9.73□□□□□ -0.85
KLF4-204ENST00000493306 HUWE1Q7Z6Z7 4374 aaKnown RBP9.72□□□□□ -0.85
KLF4-204ENST00000493306 A0A1B0GU69 56 aa9.71□□□□□ -0.85
KLF4-204ENST00000493306 DMAC1Q96GE9 116 aa9.71□□□□□ -0.85
KLF4-204ENST00000493306 COL7A1Q02388 2944 aa9.71□□□□□ -0.85
KLF4-204ENST00000493306 NBDYA0A0U1RRE5 68 aa9.69□□□□□ -0.86
KLF4-204ENST00000493306 PSORS1C2Q9UIG4 136 aa9.69□□□□□ -0.86
KLF4-204ENST00000493306 STAB2Q8WWQ8 2551 aa9.69□□□□□ -0.86
KLF4-204ENST00000493306 IGLV5-52A0A0A0MRZ9 124 aa9.68□□□□□ -0.86
KLF4-204ENST00000493306 ZNF861PO60384 105 aa9.67□□□□□ -0.86
KLF4-204ENST00000493306 Q6ZRN7 208 aaPredicted RBP9.66□□□□□ -0.86
KLF4-204ENST00000493306 SPATA8Q6RVD6 105 aa9.64□□□□□ -0.87
KLF4-204ENST00000493306 RTL8CO15255 209 aa9.62□□□□□ -0.87
KLF4-204ENST00000493306 CIRBP-AS1Q8TBR5 109 aa9.62□□□□□ -0.87
KLF4-204ENST00000493306 FAM229AH3BQW9 127 aa9.62□□□□□ -0.87
KLF4-204ENST00000493306 ALMS1Q8TCU4 4167 aa9.6□□□□□ -0.87
KLF4-204ENST00000493306 UQCR11O14957 56 aa9.6□□□□□ -0.87
KLF4-204ENST00000493306 MIR22HGQ0VDD5 57 aa9.6□□□□□ -0.87
KLF4-204ENST00000493306 RETNLBQ9BQ08 111 aa9.57□□□□□ -0.88
KLF4-204ENST00000493306 IGKV2-30P06310 120 aa9.55□□□□□ -0.88
KLF4-204ENST00000493306 A0A087WTM6 91 aa9.55□□□□□ -0.88
KLF4-204ENST00000493306 SSBP3-AS1Q7Z2R9 100 aa9.51□□□□□ -0.89
KLF4-204ENST00000493306 MGAM2Q2M2H8 2515 aa9.5□□□□□ -0.89
KLF4-204ENST00000493306 IGLV7-43P04211 117 aa9.49□□□□□ -0.89
KLF4-204ENST00000493306 DNAH7Q8WXX0 4024 aa9.49□□□□□ -0.89
KLF4-204ENST00000493306 NUPR2A6NF83 97 aa9.48□□□□□ -0.89
KLF4-204ENST00000493306 CSAG1Q6PB30 78 aa9.47□□□□□ -0.89
KLF4-204ENST00000493306 DNAH8Q96JB1 4490 aa9.45□□□□□ -0.9
KLF4-204ENST00000493306 FRAS1Q86XX4 4008 aa9.42□□□□□ -0.9
KLF4-204ENST00000493306 IGKV2D-30A0A075B6S6 120 aa9.42□□□□□ -0.9
KLF4-204ENST00000493306 DYNC2H1Q8NCM8 4307 aaKnown RBP9.4□□□□□ -0.9
KLF4-204ENST00000493306 PLECQ15149 4684 aaKnown RBP9.37□□□□□ -0.91
KLF4-204ENST00000493306 KRTAP16-1A8MUX0 517 aa9.37□□□□□ -0.91
KLF4-204ENST00000493306 C1orf134Q5TEV5 83 aa9.36□□□□□ -0.91
KLF4-204ENST00000493306 HECTD4Q9Y4D8 3996 aa9.33□□□□□ -0.92
KLF4-204ENST00000493306 SPINK1P00995 79 aa9.29□□□□□ -0.92
KLF4-204ENST00000493306 KRTAP13-2Q52LG2 175 aa9.27□□□□□ -0.92
KLF4-204ENST00000493306 ROMO1P60602 79 aa9.27□□□□□ -0.93
KLF4-204ENST00000493306 TGP01266 2768 aa9.23□□□□□ -0.93
KLF4-204ENST00000493306 DNAH17Q9UFH2 4485 aa9.23□□□□□ -0.93
KLF4-204ENST00000493306 VPS13DQ5THJ4 4388 aa9.22□□□□□ -0.93
KLF4-204ENST00000493306 LY6G6CO95867 125 aa9.22□□□□□ -0.93
KLF4-204ENST00000493306 Q8N1X5 172 aa9.2□□□□□ -0.94
KLF4-204ENST00000493306 MEGF8Q7Z7M0 2845 aa9.19□□□□□ -0.94
KLF4-204ENST00000493306 STARD9Q9P2P6 4700 aa9.15□□□□□ -0.95
KLF4-204ENST00000493306 A8MUU9 505 aa9.14□□□□□ -0.95
KLF4-204ENST00000493306 Q6ZSA8 131 aa9.14□□□□□ -0.95
KLF4-204ENST00000493306 FBN3Q75N90 2809 aa9.14□□□□□ -0.95
KLF4-204ENST00000493306 KRTAP25-1Q3LHN0 102 aa9.13□□□□□ -0.95
KLF4-204ENST00000493306 H0YAA0 97 aa9.13□□□□□ -0.95
KLF4-204ENST00000493306 DNAH2Q9P225 4427 aa9.1□□□□□ -0.95
KLF4-204ENST00000493306 KMT2AQ03164 3969 aa9.09□□□□□ -0.95
KLF4-204ENST00000493306 KRTAP1-4P0C5Y4 121 aa9.08□□□□□ -0.96
KLF4-204ENST00000493306 LINC00304Q8N9R0 145 aa9.07□□□□□ -0.96
KLF4-204ENST00000493306 A0A1B0GU33 70 aa9.06□□□□□ -0.96
KLF4-204ENST00000493306 KRTAP10-2P60368 255 aa9.06□□□□□ -0.96
KLF4-204ENST00000493306 TYMSOSQ8TAI1 123 aa9.05□□□□□ -0.96
KLF4-204ENST00000493306 PRKDCP78527 4128 aaKnown RBP9.04□□□□□ -0.96
KLF4-204ENST00000493306 DNAH11Q96DT5 4516 aa9.02□□□□□ -0.97
KLF4-204ENST00000493306 P0C880 135 aa9.01□□□□□ -0.97
KLF4-204ENST00000493306 H1FX-AS1Q4G0G2 97 aa9□□□□□ -0.97
KLF4-204ENST00000493306 DNAH6Q9C0G6 4158 aa8.98□□□□□ -0.97
KLF4-204ENST00000493306 K7ERS5 55 aa8.95□□□□□ -0.98
KLF4-204ENST00000493306 KRTAP10-1P60331 282 aa8.95□□□□□ -0.98
KLF4-204ENST00000493306 DNAH5Q8TE73 4624 aa8.91□□□□□ -0.98
KLF4-204ENST00000493306 A0A0A0MQY5 61 aa8.9□□□□□ -0.98
KLF4-204ENST00000493306 RPS29P62273 56 aaKnown RBP8.89□□□□□ -0.99
KLF4-204ENST00000493306 KRTAP3-1Q9BYR8 98 aa8.89□□□□□ -0.99
KLF4-204ENST00000493306 LRP1BQ9NZR2 4599 aa8.87□□□□□ -0.99
KLF4-204ENST00000493306 FLG2Q5D862 2391 aaPredicted RBP8.84□□□□□ -0.99
KLF4-204ENST00000493306 C20orf166-AS1Q96NR2 134 aa8.84□□□□□ -0.99
KLF4-204ENST00000493306 C9orf92A6NGG3 77 aa8.84□□□□□ -0.99
KLF4-204ENST00000493306 CRIPTQ9P021 101 aa8.82□□□□□ -1
KLF4-204ENST00000493306 COX6B2Q6YFQ2 88 aa8.81□□□□□ -1
KLF4-204ENST00000493306 VPS13BQ7Z7G8 4022 aa8.78□□□□□ -1
KLF4-204ENST00000493306 PKD1P98161 4303 aa8.69□□□□□ -1.02
KLF4-204ENST00000493306 RPL37P61927 97 aaKnown RBP8.68□□□□□ -1.02
KLF4-204ENST00000493306 KRTAP21-3Q3LHN1 58 aa8.66□□□□□ -1.02
KLF4-204ENST00000493306 NDUFAF8A1L188 74 aa8.64□□□□□ -1.03
KLF4-204ENST00000493306 DNHD1Q96M86 4753 aa8.62□□□□□ -1.03
KLF4-204ENST00000493306 SPINT4Q6UDR6 99 aa8.61□□□□□ -1.03
KLF4-204ENST00000493306 A0A0D9SG42 100 aa8.58□□□□□ -1.04
KLF4-204ENST00000493306 FAT2Q9NYQ8 4349 aa8.58□□□□□ -1.04
KLF4-204ENST00000493306 KRTAP10-6P60371 365 aaPredicted RBP8.56□□□□□ -1.04
KLF4-204ENST00000493306 KRTAP15-1Q3LI76 137 aa8.55□□□□□ -1.04
KLF4-204ENST00000493306 TPRXLQ17RH7 258 aa8.53□□□□□ -1.04
KLF4-204ENST00000493306 KRTAP13-4Q3LI77 160 aa8.53□□□□□ -1.04
KLF4-204ENST00000493306 SMR3BP02814 79 aaPredicted RBP8.52□□□□□ -1.04
KLF4-204ENST00000493306 SACSQ9NZJ4 4579 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms