RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 CDC42SE1Q9NRR8 79 aa5.69□□□□□ -1.5
CSTF1-206ENST00000493039 ASB16-AS1Q495Z4 193 aa5.68□□□□□ -1.5
CSTF1-206ENST00000493039 ZNF861PO60384 105 aa5.68□□□□□ -1.5
CSTF1-206ENST00000493039 Q6ZRX8 168 aa5.68□□□□□ -1.5
CSTF1-206ENST00000493039 CHKB-CPT1BH3BT56 60 aa5.67□□□□□ -1.5
CSTF1-206ENST00000493039 ELOF1P60002 83 aaKnown RBP5.67□□□□□ -1.5
CSTF1-206ENST00000493039 RETNLBQ9BQ08 111 aa5.67□□□□□ -1.5
CSTF1-206ENST00000493039 ETDCA0A1B0GVM5 59 aa5.67□□□□□ -1.5
CSTF1-206ENST00000493039 MOBPQ13875 183 aa5.66□□□□□ -1.5
CSTF1-206ENST00000493039 A0A087X002 238 aa5.66□□□□□ -1.5
CSTF1-206ENST00000493039 FAT3Q8TDW7 4589 aa5.65□□□□□ -1.5
CSTF1-206ENST00000493039 FLG2Q5D862 2391 aaPredicted RBP5.65□□□□□ -1.5
CSTF1-206ENST00000493039 COX7BP24311 80 aa5.65□□□□□ -1.5
CSTF1-206ENST00000493039 TMEM254Q8TBM7 123 aa5.65□□□□□ -1.5
CSTF1-206ENST00000493039 PRAC1Q96KF2 57 aa5.64□□□□□ -1.51
CSTF1-206ENST00000493039 HIGD2AQ9BW72 106 aa5.64□□□□□ -1.51
CSTF1-206ENST00000493039 LIMD2Q9BT23 127 aa5.64□□□□□ -1.51
CSTF1-206ENST00000493039 LINC00575Q6W349 94 aa5.63□□□□□ -1.51
CSTF1-206ENST00000493039 PCLOQ9Y6V0 5065 aa5.63□□□□□ -1.51
CSTF1-206ENST00000493039 IGLV9-49A0A0B4J1Y8 123 aa5.63□□□□□ -1.51
CSTF1-206ENST00000493039 SPINK6Q6UWN8 80 aa5.63□□□□□ -1.51
CSTF1-206ENST00000493039 OBSCN-AS1Q96MR7 158 aa5.63□□□□□ -1.51
CSTF1-206ENST00000493039 C1orf64Q8NEQ6 169 aa5.62□□□□□ -1.51
CSTF1-206ENST00000493039 KRTAP1-4P0C5Y4 121 aa5.62□□□□□ -1.51
CSTF1-206ENST00000493039 ST20-AS1Q8NBB2 130 aa5.62□□□□□ -1.51
CSTF1-206ENST00000493039 H0YGX0 51 aa5.6□□□□□ -1.51
CSTF1-206ENST00000493039 DHRS4-AS1Q9P1J3 65 aa5.6□□□□□ -1.51
CSTF1-206ENST00000493039 LOC100996750A0A140TA64 210 aa5.6□□□□□ -1.51
CSTF1-206ENST00000493039 KRTAP4-6Q9BYQ5 205 aa5.6□□□□□ -1.51
CSTF1-206ENST00000493039 ANAPC11Q9NYG5 84 aa5.6□□□□□ -1.51
CSTF1-206ENST00000493039 TNXBP22105 4242 aa5.6□□□□□ -1.51
CSTF1-206ENST00000493039 LINC01547P58512 204 aaPredicted RBP5.59□□□□□ -1.51
CSTF1-206ENST00000493039 SPRR4Q96PI1 79 aa5.59□□□□□ -1.52
CSTF1-206ENST00000493039 A6NED7 52 aa5.58□□□□□ -1.52
CSTF1-206ENST00000493039 Q6ZQY7 126 aa5.57□□□□□ -1.52
CSTF1-206ENST00000493039 A0A1B0GW54 56 aa5.56□□□□□ -1.52
CSTF1-206ENST00000493039 KRTAP16-1A8MUX0 517 aa5.56□□□□□ -1.52
CSTF1-206ENST00000493039 IGLV5-48A0A075B6I7 105 aa5.56□□□□□ -1.52
CSTF1-206ENST00000493039 LINC00483Q53H64 154 aa5.56□□□□□ -1.52
CSTF1-206ENST00000493039 ADM2Q7Z4H4 148 aa5.56□□□□□ -1.52
CSTF1-206ENST00000493039 Q8N377 158 aa5.56□□□□□ -1.52
CSTF1-206ENST00000493039 LOC101927531A0A1B0GV80 90 aa5.55□□□□□ -1.52
CSTF1-206ENST00000493039 NREPQ16612 68 aa5.55□□□□□ -1.52
CSTF1-206ENST00000493039 C14orf132Q9NPU4 83 aa5.55□□□□□ -1.52
CSTF1-206ENST00000493039 SPRR1BP22528 89 aa5.55□□□□□ -1.52
CSTF1-206ENST00000493039 CASC2Q6XLA1 102 aa5.55□□□□□ -1.52
CSTF1-206ENST00000493039 SMIM29Q86T20 159 aa5.55□□□□□ -1.52
CSTF1-206ENST00000493039 DEFB105AQ8NG35 78 aa5.55□□□□□ -1.52
CSTF1-206ENST00000493039 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.54□□□□□ -1.52
CSTF1-206ENST00000493039 KRTAP13-2Q52LG2 175 aa5.54□□□□□ -1.52
CSTF1-206ENST00000493039 Q8N9P0 234 aaPredicted RBP5.54□□□□□ -1.52
CSTF1-206ENST00000493039 ROMO1P60602 79 aa5.53□□□□□ -1.52
CSTF1-206ENST00000493039 PRR15LQ9BU68 103 aa5.52□□□□□ -1.53
CSTF1-206ENST00000493039 UBL5Q9BZL1 73 aa5.52□□□□□ -1.53
CSTF1-206ENST00000493039 MT1HL1P0DM35 61 aa5.51□□□□□ -1.53
CSTF1-206ENST00000493039 KRTAP10-8P60410 259 aa5.51□□□□□ -1.53
CSTF1-206ENST00000493039 H3BQ85 93 aa5.48□□□□□ -1.53
CSTF1-206ENST00000493039 ORMDL1Q9P0S3 153 aa5.48□□□□□ -1.53
CSTF1-206ENST00000493039 KRTAP29-1A8MX34 341 aaPredicted RBP5.48□□□□□ -1.53
CSTF1-206ENST00000493039 DMBT1Q9UGM3 2413 aaPredicted RBP5.48□□□□□ -1.53
CSTF1-206ENST00000493039 HERC1Q15751 4861 aa5.47□□□□□ -1.53
CSTF1-206ENST00000493039 A0A0G2JQZ4 141 aa5.47□□□□□ -1.53
CSTF1-206ENST00000493039 TYMSOSQ8TAI1 123 aa5.45□□□□□ -1.54
CSTF1-206ENST00000493039 IGLV8-61A0A075B6I0 122 aa5.44□□□□□ -1.54
CSTF1-206ENST00000493039 OCR1Q9BZK8 76 aa5.44□□□□□ -1.54
CSTF1-206ENST00000493039 BPY2O14599 106 aa5.44□□□□□ -1.54
CSTF1-206ENST00000493039 Q8NBF4 154 aa5.43□□□□□ -1.54
CSTF1-206ENST00000493039 SSBP3-AS1Q7Z2R9 100 aa5.43□□□□□ -1.54
CSTF1-206ENST00000493039 JMJD7-PLA2G4BH0Y9G9 81 aa5.42□□□□□ -1.54
CSTF1-206ENST00000493039 IGFL1Q6UW32 110 aa5.42□□□□□ -1.54
CSTF1-206ENST00000493039 CSAG1Q6PB30 78 aa5.4□□□□□ -1.55
CSTF1-206ENST00000493039 ZCCHC13Q8WW36 166 aaKnown RBP5.4□□□□□ -1.55
CSTF1-206ENST00000493039 A0A1W2PNM2 257 aa5.39□□□□□ -1.55
CSTF1-206ENST00000493039 LINC00304Q8N9R0 145 aa5.39□□□□□ -1.55
CSTF1-206ENST00000493039 P0C880 135 aa5.38□□□□□ -1.55
CSTF1-206ENST00000493039 C8orf17Q9NRJ1 99 aa5.38□□□□□ -1.55
CSTF1-206ENST00000493039 MIR22HGQ0VDD5 57 aa5.37□□□□□ -1.55
CSTF1-206ENST00000493039 A8MWP4 228 aa5.35□□□□□ -1.55
CSTF1-206ENST00000493039 LUZP6Q538Z0 58 aa5.35□□□□□ -1.55
CSTF1-206ENST00000493039 Q6ZQT0 140 aa5.35□□□□□ -1.55
CSTF1-206ENST00000493039 SPINK1P00995 79 aa5.35□□□□□ -1.55
CSTF1-206ENST00000493039 PDE6GP18545 87 aa5.35□□□□□ -1.55
CSTF1-206ENST00000493039 SPAG11AQ6PDA7 123 aa5.35□□□□□ -1.55
CSTF1-206ENST00000493039 LINC00208Q96KT6 92 aa5.34□□□□□ -1.55
CSTF1-206ENST00000493039 LOC110117498A0A087WWA1 95 aa5.33□□□□□ -1.56
CSTF1-206ENST00000493039 NDUFB1O75438 58 aa5.33□□□□□ -1.56
CSTF1-206ENST00000493039 LINC01558Q9Y6Z2 57 aa5.33□□□□□ -1.56
CSTF1-206ENST00000493039 HMCN2Q8NDA2 5059 aa5.33□□□□□ -1.56
CSTF1-206ENST00000493039 RPS29P62273 56 aaKnown RBP5.31□□□□□ -1.56
CSTF1-206ENST00000493039 SPINK7P58062 85 aa5.31□□□□□ -1.56
CSTF1-206ENST00000493039 A0A087WSZ3 146 aa5.3□□□□□ -1.56
CSTF1-206ENST00000493039 SPANXA2-OT1Q8N9U9 137 aa5.28□□□□□ -1.56
CSTF1-206ENST00000493039 LPAP08519 4548 aa5.28□□□□□ -1.56
CSTF1-206ENST00000493039 PRR4Q16378 134 aa5.26□□□□□ -1.57
CSTF1-206ENST00000493039 Q96NJ1 140 aa5.26□□□□□ -1.57
CSTF1-206ENST00000493039 K7ERS5 55 aa5.25□□□□□ -1.57
CSTF1-206ENST00000493039 C20orf166-AS1Q96NR2 134 aa5.25□□□□□ -1.57
CSTF1-206ENST00000493039 LRP2P98164 4655 aa5.24□□□□□ -1.57
CSTF1-206ENST00000493039 LINC00472Q9H8W2 130 aa5.24□□□□□ -1.57
CSTF1-206ENST00000493039 IGKV4-1P06312 121 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms