RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 ATXN8Q156A1 80 aa6□□□□□ -1.45
GPNMB-214ENST00000492858 FABP2P12104 132 aa5.99□□□□□ -1.45
GPNMB-214ENST00000492858 UBE2V1Q13404 147 aa5.99□□□□□ -1.45
GPNMB-214ENST00000492858 Q96NJ1 140 aa5.99□□□□□ -1.45
GPNMB-214ENST00000492858 TMEM256-PLSCR3K7ERE1 68 aa5.98□□□□□ -1.45
GPNMB-214ENST00000492858 ORMDL1Q9P0S3 153 aa5.98□□□□□ -1.45
GPNMB-214ENST00000492858 DNAL4O96015 105 aa5.96□□□□□ -1.46
GPNMB-214ENST00000492858 KRTAP20-1Q3LI63 56 aa5.96□□□□□ -1.46
GPNMB-214ENST00000492858 PRO0461Q9UI25 63 aa5.96□□□□□ -1.46
GPNMB-214ENST00000492858 K7EP34 96 aa5.95□□□□□ -1.46
GPNMB-214ENST00000492858 NDUFV3P56181 108 aaKnown RBP5.95□□□□□ -1.46
GPNMB-214ENST00000492858 IGFL1Q6UW32 110 aa5.95□□□□□ -1.46
GPNMB-214ENST00000492858 SPCS1Q9Y6A9 102 aa5.95□□□□□ -1.46
GPNMB-214ENST00000492858 H3BMG7 143 aa5.94□□□□□ -1.46
GPNMB-214ENST00000492858 BAALC-AS2P0C853 105 aa5.94□□□□□ -1.46
GPNMB-214ENST00000492858 A8MUU9 505 aa5.93□□□□□ -1.46
GPNMB-214ENST00000492858 H3BT86 120 aa5.93□□□□□ -1.46
GPNMB-214ENST00000492858 Q6JHZ5 121 aa5.93□□□□□ -1.46
GPNMB-214ENST00000492858 TRBV7-4A0A0J9YYF1 115 aa5.91□□□□□ -1.46
GPNMB-214ENST00000492858 TRBV7-7A0A0K0K1E9 115 aa5.91□□□□□ -1.46
GPNMB-214ENST00000492858 C9JAW5 83 aa5.91□□□□□ -1.46
GPNMB-214ENST00000492858 H3BS24 57 aa5.91□□□□□ -1.46
GPNMB-214ENST00000492858 F8WEM9 126 aa5.9□□□□□ -1.46
GPNMB-214ENST00000492858 RBM12B-AS1Q9P1G2 102 aa5.9□□□□□ -1.46
GPNMB-214ENST00000492858 ANKRD29Q8N6D5 301 aa5.89□□□□□ -1.47
GPNMB-214ENST00000492858 GTF2H5Q6ZYL4 71 aa5.88□□□□□ -1.47
GPNMB-214ENST00000492858 MPLKIPQ8TAP9 179 aa5.88□□□□□ -1.47
GPNMB-214ENST00000492858 LOC110117498A0A087WWA1 95 aa5.87□□□□□ -1.47
GPNMB-214ENST00000492858 A0A1W2PNM2 257 aa5.87□□□□□ -1.47
GPNMB-214ENST00000492858 JMJD7-PLA2G4BH0Y9G9 81 aa5.87□□□□□ -1.47
GPNMB-214ENST00000492858 KRTAP16-1A8MUX0 517 aa5.86□□□□□ -1.47
GPNMB-214ENST00000492858 F8W1H4 67 aa5.86□□□□□ -1.47
GPNMB-214ENST00000492858 HRES1P13985 223 aa5.86□□□□□ -1.47
GPNMB-214ENST00000492858 RBM3P98179 157 aaKnown RBP5.86□□□□□ -1.47
GPNMB-214ENST00000492858 A0A1B0GV90 55 aa5.84□□□□□ -1.47
GPNMB-214ENST00000492858 Q6ZQT0 140 aa5.84□□□□□ -1.47
GPNMB-214ENST00000492858 TEN1Q86WV5 123 aa5.84□□□□□ -1.47
GPNMB-214ENST00000492858 MTURNQ8N3F0 131 aa5.84□□□□□ -1.47
GPNMB-214ENST00000492858 MDN1Q9NU22 5596 aa5.84□□□□□ -1.48
GPNMB-214ENST00000492858 A0A1B0GW54 56 aa5.82□□□□□ -1.48
GPNMB-214ENST00000492858 PDE6GP18545 87 aa5.82□□□□□ -1.48
GPNMB-214ENST00000492858 Q8N9P0 234 aaPredicted RBP5.82□□□□□ -1.48
GPNMB-214ENST00000492858 DSCR8Q96T75 97 aa5.81□□□□□ -1.48
GPNMB-214ENST00000492858 DSCR10P59022 87 aa5.8□□□□□ -1.48
GPNMB-214ENST00000492858 CCKP06307 115 aa5.79□□□□□ -1.48
GPNMB-214ENST00000492858 NOTCH2NLQ7Z3S9 236 aa5.78□□□□□ -1.48
GPNMB-214ENST00000492858 C14orf132Q9NPU4 83 aa5.78□□□□□ -1.48
GPNMB-214ENST00000492858 A8MWP4 228 aa5.77□□□□□ -1.49
GPNMB-214ENST00000492858 A0A1B0GV72 72 aa5.76□□□□□ -1.49
GPNMB-214ENST00000492858 ETDBQ3ZM63 59 aa5.76□□□□□ -1.49
GPNMB-214ENST00000492858 SS18L2Q9UHA2 77 aa5.76□□□□□ -1.49
GPNMB-214ENST00000492858 A0A087WSZ3 146 aa5.75□□□□□ -1.49
GPNMB-214ENST00000492858 LINC00472Q9H8W2 130 aa5.75□□□□□ -1.49
GPNMB-214ENST00000492858 KMT2DO14686 5537 aa5.74□□□□□ -1.49
GPNMB-214ENST00000492858 LINC00313P59037 77 aa5.7□□□□□ -1.5
GPNMB-214ENST00000492858 SIGMAR1Q99720 223 aa5.69□□□□□ -1.5
GPNMB-214ENST00000492858 VPS25Q9BRG1 176 aa5.68□□□□□ -1.5
GPNMB-214ENST00000492858 FAM240AA0A1B0GVK7 77 aa5.67□□□□□ -1.5
GPNMB-214ENST00000492858 A6NN06 94 aa5.67□□□□□ -1.5
GPNMB-214ENST00000492858 J3KT08 172 aa5.65□□□□□ -1.5
GPNMB-214ENST00000492858 KRTAP2-3P0C7H8 128 aa5.65□□□□□ -1.5
GPNMB-214ENST00000492858 KRTAP5-9P26371 169 aa5.65□□□□□ -1.5
GPNMB-214ENST00000492858 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.5
GPNMB-214ENST00000492858 KRTAP2-4Q9BYR9 128 aa5.65□□□□□ -1.5
GPNMB-214ENST00000492858 ACYP1P07311 99 aa5.64□□□□□ -1.51
GPNMB-214ENST00000492858 Q6ZVQ6 151 aa5.63□□□□□ -1.51
GPNMB-214ENST00000492858 NREPQ16612 68 aa5.62□□□□□ -1.51
GPNMB-214ENST00000492858 IGKV4-1P06312 121 aa5.61□□□□□ -1.51
GPNMB-214ENST00000492858 SPINK7P58062 85 aa5.61□□□□□ -1.51
GPNMB-214ENST00000492858 IGKV3D-7A0A0C4DH55 119 aa5.59□□□□□ -1.51
GPNMB-214ENST00000492858 A0A1B0GVX0 72 aa5.59□□□□□ -1.51
GPNMB-214ENST00000492858 DEFB116Q30KQ4 102 aa5.59□□□□□ -1.51
GPNMB-214ENST00000492858 UBL5Q9BZL1 73 aa5.58□□□□□ -1.52
GPNMB-214ENST00000492858 PCP4P48539 62 aa5.57□□□□□ -1.52
GPNMB-214ENST00000492858 WFDC13Q8IUB5 93 aa5.57□□□□□ -1.52
GPNMB-214ENST00000492858 PRR15Q8IV56 129 aa5.57□□□□□ -1.52
GPNMB-214ENST00000492858 IGHV6-1A0A0B4J1U7 121 aa5.56□□□□□ -1.52
GPNMB-214ENST00000492858 C8orf87E5RJ46 101 aa5.56□□□□□ -1.52
GPNMB-214ENST00000492858 CXCL6P80162 114 aa5.56□□□□□ -1.52
GPNMB-214ENST00000492858 BPY2O14599 106 aa5.55□□□□□ -1.52
GPNMB-214ENST00000492858 ZCCHC13Q8WW36 166 aaKnown RBP5.55□□□□□ -1.52
GPNMB-214ENST00000492858 J3QR89 54 aa5.53□□□□□ -1.52
GPNMB-214ENST00000492858 MMP24-AS1A0A0U1RRL7 71 aa5.52□□□□□ -1.53
GPNMB-214ENST00000492858 K7EQZ3 153 aa5.52□□□□□ -1.53
GPNMB-214ENST00000492858 NDUFB1O75438 58 aa5.52□□□□□ -1.53
GPNMB-214ENST00000492858 MT1BP07438 61 aa5.52□□□□□ -1.53
GPNMB-214ENST00000492858 LINC00643Q86TS7 51 aa5.52□□□□□ -1.53
GPNMB-214ENST00000492858 C8orf17Q9NRJ1 99 aa5.52□□□□□ -1.53
GPNMB-214ENST00000492858 ATP5EP2Q5VTU8 51 aa5.51□□□□□ -1.53
GPNMB-214ENST00000492858 KRTAP10-5P60370 271 aa5.5□□□□□ -1.53
GPNMB-214ENST00000492858 K7ERU9 68 aa5.48□□□□□ -1.53
GPNMB-214ENST00000492858 Q5VV11 94 aa5.48□□□□□ -1.53
GPNMB-214ENST00000492858 Q8N9L7 120 aa5.47□□□□□ -1.53
GPNMB-214ENST00000492858 TMEM254Q8TBM7 123 aa5.47□□□□□ -1.53
GPNMB-214ENST00000492858 H1FX-AS1Q4G0G2 97 aa5.46□□□□□ -1.54
GPNMB-214ENST00000492858 hDV103S1A0JD37 113 aa5.44□□□□□ -1.54
GPNMB-214ENST00000492858 SPRR2EP22531 72 aa5.44□□□□□ -1.54
GPNMB-214ENST00000492858 SPRR2BP35325 72 aa5.44□□□□□ -1.54
GPNMB-214ENST00000492858 SPRR2AP35326 72 aa5.44□□□□□ -1.54
GPNMB-214ENST00000492858 LCE3BQ5TA77 95 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms