RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 NPVFQ9HCQ7 196 aa2.01□□□□□ -2.09
SND1-216ENST00000492840 CCKP06307 115 aa2□□□□□ -2.09
SND1-216ENST00000492840 SMIM6P0DI80 62 aa2□□□□□ -2.09
SND1-216ENST00000492840 GNG4P50150 75 aa2□□□□□ -2.09
SND1-216ENST00000492840 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
SND1-216ENST00000492840 SPAG11AQ6PDA7 123 aa2□□□□□ -2.09
SND1-216ENST00000492840 SCP2D1Q9UJQ7 156 aa2□□□□□ -2.09
SND1-216ENST00000492840 PIGBOS1A0A0B4J2F0 54 aa1.99□□□□□ -2.09
SND1-216ENST00000492840 MT2AP02795 61 aa1.99□□□□□ -2.09
SND1-216ENST00000492840 KRTAP5-5Q701N2 237 aaPredicted RBP1.99□□□□□ -2.09
SND1-216ENST00000492840 SVBPQ8N300 66 aa1.99□□□□□ -2.09
SND1-216ENST00000492840 S100A16Q96FQ6 103 aaKnown RBP1.99□□□□□ -2.09
SND1-216ENST00000492840 KRTAP2-1Q9BYU5 128 aa1.99□□□□□ -2.09
SND1-216ENST00000492840 MRPL35Q9NZE8 188 aaKnown RBP1.99□□□□□ -2.09
SND1-216ENST00000492840 TRBV6-1A0A0K0K1D8 114 aa1.98□□□□□ -2.09
SND1-216ENST00000492840 C20orf202A1L168 122 aa1.98□□□□□ -2.09
SND1-216ENST00000492840 HIGD1CA8MV81 97 aa1.98□□□□□ -2.09
SND1-216ENST00000492840 UBE2G1P62253 170 aa1.98□□□□□ -2.09
SND1-216ENST00000492840 IFI27L1Q96BM0 104 aa1.98□□□□□ -2.09
SND1-216ENST00000492840 TMEM218A2RU14 115 aa1.97□□□□□ -2.09
SND1-216ENST00000492840 MT1FP04733 61 aa1.97□□□□□ -2.09
SND1-216ENST00000492840 KRTAP5-9P26371 169 aa1.97□□□□□ -2.09
SND1-216ENST00000492840 PEA15Q15121 130 aa1.97□□□□□ -2.09
SND1-216ENST00000492840 ZNF56Q15929 161 aa1.97□□□□□ -2.09
SND1-216ENST00000492840 MGST2Q99735 147 aa1.97□□□□□ -2.09
SND1-216ENST00000492840 LOC101927531A0A1B0GV80 90 aa1.96□□□□□ -2.1
SND1-216ENST00000492840 IGKV2-29A2NJV5 120 aaPredicted RBP1.96□□□□□ -2.1
SND1-216ENST00000492840 NAP1L6A6NFF2 107 aa1.96□□□□□ -2.1
SND1-216ENST00000492840 H3BVH4 76 aa1.96□□□□□ -2.1
SND1-216ENST00000492840 S100A7L2Q5SY68 101 aa1.96□□□□□ -2.1
SND1-216ENST00000492840 NMES1Q9C002 83 aa1.96□□□□□ -2.1
SND1-216ENST00000492840 SMCO4Q9NRQ5 59 aa1.96□□□□□ -2.1
SND1-216ENST00000492840 PSENENQ9NZ42 101 aa1.96□□□□□ -2.1
SND1-216ENST00000492840 BCE1O60756 84 aa1.95□□□□□ -2.1
SND1-216ENST00000492840 APOC3P02656 99 aa1.95□□□□□ -2.1
SND1-216ENST00000492840 FAUP35544 74 aaKnown RBP1.95□□□□□ -2.1
SND1-216ENST00000492840 RPL7L1Q6DKI1 246 aaKnown RBP1.95□□□□□ -2.1
SND1-216ENST00000492840 MRPL54Q6P161 138 aaKnown RBP1.95□□□□□ -2.1
SND1-216ENST00000492840 KANTRA0A1W2PQU2 76 aa1.94□□□□□ -2.1
SND1-216ENST00000492840 M0R143 59 aa1.94□□□□□ -2.1
SND1-216ENST00000492840 ARMS2P0C7Q2 107 aa1.94□□□□□ -2.1
SND1-216ENST00000492840 UBE2L3P68036 154 aaKnown RBP1.94□□□□□ -2.1
SND1-216ENST00000492840 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
SND1-216ENST00000492840 Q8N8P6 123 aa1.94□□□□□ -2.1
SND1-216ENST00000492840 FAM167A-AS1Q96KT0 104 aa1.94□□□□□ -2.1
SND1-216ENST00000492840 SSSCA1O60232 199 aa1.93□□□□□ -2.1
SND1-216ENST00000492840 SPINK1P00995 79 aa1.93□□□□□ -2.1
SND1-216ENST00000492840 NPC2P61916 151 aa1.93□□□□□ -2.1
SND1-216ENST00000492840 C9orf62Q8N4C0 152 aa1.93□□□□□ -2.1
SND1-216ENST00000492840 TOMM5Q8N4H5 51 aa1.93□□□□□ -2.1
SND1-216ENST00000492840 RPS29P62273 56 aaKnown RBP1.92□□□□□ -2.1
SND1-216ENST00000492840 SPAG11BQ08648 103 aa1.92□□□□□ -2.1
SND1-216ENST00000492840 C9orf153Q5TBE3 101 aa1.92□□□□□ -2.1
SND1-216ENST00000492840 SPANXDQ9BXN6 97 aa1.92□□□□□ -2.1
SND1-216ENST00000492840 UBE2L5PA0A1B0GUS4 154 aa1.91□□□□□ -2.1
SND1-216ENST00000492840 LINC00959A0A1B0GUT2 108 aa1.91□□□□□ -2.1
SND1-216ENST00000492840 NDUFA1O15239 70 aa1.91□□□□□ -2.1
SND1-216ENST00000492840 RBM3P98179 157 aaKnown RBP1.91□□□□□ -2.1
SND1-216ENST00000492840 SSBP1Q04837 148 aaKnown RBP1.91□□□□□ -2.1
SND1-216ENST00000492840 SPTSSBQ8NFR3 76 aa1.91□□□□□ -2.1
SND1-216ENST00000492840 TEX49A0A1B0GTD5 131 aa1.9□□□□□ -2.11
SND1-216ENST00000492840 KRTAP12-4P60329 112 aa1.9□□□□□ -2.11
SND1-216ENST00000492840 Q5BKY6 102 aa1.9□□□□□ -2.11
SND1-216ENST00000492840 COL5A1-AS1Q5SY13 56 aa1.9□□□□□ -2.11
SND1-216ENST00000492840 LINC00208Q96KT6 92 aa1.9□□□□□ -2.11
SND1-216ENST00000492840 C9orf92A6NGG3 77 aa1.89□□□□□ -2.11
SND1-216ENST00000492840 NCR3O14931 201 aa1.89□□□□□ -2.11
SND1-216ENST00000492840 SPRR2EP22531 72 aa1.89□□□□□ -2.11
SND1-216ENST00000492840 SPRR2BP35325 72 aa1.89□□□□□ -2.11
SND1-216ENST00000492840 SPRR2AP35326 72 aa1.89□□□□□ -2.11
SND1-216ENST00000492840 GTF2H5Q6ZYL4 71 aa1.89□□□□□ -2.11
SND1-216ENST00000492840 DSCR8Q96T75 97 aa1.89□□□□□ -2.11
SND1-216ENST00000492840 C6orf48Q9UBA6 75 aa1.89□□□□□ -2.11
SND1-216ENST00000492840 V9GYH0 126 aa1.89□□□□□ -2.11
SND1-216ENST00000492840 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.88□□□□□ -2.11
SND1-216ENST00000492840 FXYD6-FXYD2A0A087WZ82 144 aa1.88□□□□□ -2.11
SND1-216ENST00000492840 M0QY20 66 aa1.88□□□□□ -2.11
SND1-216ENST00000492840 MPC2O95563 127 aa1.88□□□□□ -2.11
SND1-216ENST00000492840 RPL37P61927 97 aaKnown RBP1.88□□□□□ -2.11
SND1-216ENST00000492840 ALKAL2Q6UX46 152 aa1.88□□□□□ -2.11
SND1-216ENST00000492840 Q6ZQY7 126 aa1.88□□□□□ -2.11
SND1-216ENST00000492840 TRBV30A0A0K0K1B3 111 aa1.87□□□□□ -2.11
SND1-216ENST00000492840 TRBV10-3A0A0K0K1G6 114 aa1.87□□□□□ -2.11
SND1-216ENST00000492840 SFT2D2O95562 160 aa1.87□□□□□ -2.11
SND1-216ENST00000492840 MGPP08493 103 aa1.87□□□□□ -2.11
SND1-216ENST00000492840 PRLHP81277 87 aa1.87□□□□□ -2.11
SND1-216ENST00000492840 HSD52Q0P140 79 aa1.87□□□□□ -2.11
SND1-216ENST00000492840 ARL2-SNX15V9GYD0 113 aa1.87□□□□□ -2.11
SND1-216ENST00000492840 AHNAK2Q8IVF2 5795 aa1.87□□□□□ -2.11
SND1-216ENST00000492840 C7orf77A4D0Y5 90 aa1.86□□□□□ -2.11
SND1-216ENST00000492840 UMAD1C9J7I0 102 aa1.86□□□□□ -2.11
SND1-216ENST00000492840 IFITM1P13164 125 aa1.86□□□□□ -2.11
SND1-216ENST00000492840 C5orf38Q86SI9 138 aa1.86□□□□□ -2.11
SND1-216ENST00000492840 Q86TA4 180 aa1.86□□□□□ -2.11
SND1-216ENST00000492840 SMIM4Q8WVI0 70 aa1.86□□□□□ -2.11
SND1-216ENST00000492840 HCG22E2RYF7 251 aa1.85□□□□□ -2.11
SND1-216ENST00000492840 SIX6O95475 246 aa1.85□□□□□ -2.11
SND1-216ENST00000492840 PYY3Q5JQD4 70 aa1.85□□□□□ -2.11
SND1-216ENST00000492840 SPRR4Q96PI1 79 aa1.85□□□□□ -2.11
SND1-216ENST00000492840 CDC42SE2Q9NRR3 84 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms