RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 DEFB106AQ8N104 65 aa-0.74□□□□□ -2.53
CLK1-213ENST00000492793 MYO18BQ8IUG5 2567 aa-0.74□□□□□ -2.53
CLK1-213ENST00000492793 FAM186AA6NE01 2351 aa-0.75□□□□□ -2.53
CLK1-213ENST00000492793 LAMA1P25391 3075 aa-0.75□□□□□ -2.53
CLK1-213ENST00000492793 ITSN1Q15811 1721 aa-0.75□□□□□ -2.53
CLK1-213ENST00000492793 CEP290O15078 2479 aa-0.75□□□□□ -2.53
CLK1-213ENST00000492793 LRRK2Q5S007 2527 aa-0.75□□□□□ -2.53
CLK1-213ENST00000492793 USP9YO00507 2555 aaPredicted RBP-0.75□□□□□ -2.53
CLK1-213ENST00000492793 UBL5Q9BZL1 73 aa-0.75□□□□□ -2.53
CLK1-213ENST00000492793 CFAP74Q9C0B2 1584 aa-0.75□□□□□ -2.53
CLK1-213ENST00000492793 ENHOQ6UWT2 76 aa-0.76□□□□□ -2.53
CLK1-213ENST00000492793 RALGAPBQ86X10 1494 aa-0.76□□□□□ -2.53
CLK1-213ENST00000492793 HFM1A2PYH4 1435 aa-0.77□□□□□ -2.53
CLK1-213ENST00000492793 KALRNO60229 2985 aa-0.78□□□□□ -2.53
CLK1-213ENST00000492793 DNAH1Q9P2D7 4330 aa-0.78□□□□□ -2.53
CLK1-213ENST00000492793 H3BVH4 76 aa-0.78□□□□□ -2.53
CLK1-213ENST00000492793 CCDC168Q8NDH2 2452 aa-0.78□□□□□ -2.53
CLK1-213ENST00000492793 ZC3H13Q5T200 1668 aaKnown RBP-0.78□□□□□ -2.53
CLK1-213ENST00000492793 RNF17Q9BXT8 1623 aaKnown RBP-0.78□□□□□ -2.54
CLK1-213ENST00000492793 THOC2Q8NI27 1593 aaKnown RBP-0.79□□□□□ -2.54
CLK1-213ENST00000492793 UTP20O75691 2785 aaKnown RBP-0.79□□□□□ -2.54
CLK1-213ENST00000492793 ITPR2Q14571 2701 aa-0.79□□□□□ -2.54
CLK1-213ENST00000492793 ANKARQ7Z5J8 1434 aa-0.79□□□□□ -2.54
CLK1-213ENST00000492793 MGAM2Q2M2H8 2515 aa-0.79□□□□□ -2.54
CLK1-213ENST00000492793 LMTK2Q8IWU2 1503 aa-0.79□□□□□ -2.54
CLK1-213ENST00000492793 RRBP1Q9P2E9 1410 aaKnown RBP-0.8□□□□□ -2.54
CLK1-213ENST00000492793 NBEAQ8NFP9 2946 aa-0.8□□□□□ -2.54
CLK1-213ENST00000492793 ETDCA0A1B0GVM5 59 aa-0.8□□□□□ -2.54
CLK1-213ENST00000492793 WT1-ASQ06250 92 aa-0.8□□□□□ -2.54
CLK1-213ENST00000492793 DEFB110Q30KQ9 67 aa-0.8□□□□□ -2.54
CLK1-213ENST00000492793 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.8□□□□□ -2.54
CLK1-213ENST00000492793 KIAA0586Q9BVV6 1533 aa-0.8□□□□□ -2.54
CLK1-213ENST00000492793 DNAH2Q9P225 4427 aa-0.8□□□□□ -2.54
CLK1-213ENST00000492793 RPS27P42677 84 aaKnown RBP-0.82□□□□□ -2.54
CLK1-213ENST00000492793 RPS27LQ71UM5 84 aaKnown RBP-0.82□□□□□ -2.54
CLK1-213ENST00000492793 ACACBO00763 2458 aa-0.82□□□□□ -2.54
CLK1-213ENST00000492793 ABCA8O94911 1581 aa-0.83□□□□□ -2.54
CLK1-213ENST00000492793 ANKRD36CQ5JPF3 1778 aa-0.83□□□□□ -2.54
CLK1-213ENST00000492793 DIP2AQ14689 1571 aa-0.83□□□□□ -2.54
CLK1-213ENST00000492793 PLECQ15149 4684 aaKnown RBP-0.83□□□□□ -2.54
CLK1-213ENST00000492793 DNAH8Q96JB1 4490 aa-0.83□□□□□ -2.54
CLK1-213ENST00000492793 MINOS1Q5TGZ0 78 aa-0.84□□□□□ -2.54
CLK1-213ENST00000492793 INO80Q9ULG1 1556 aaPredicted RBP-0.84□□□□□ -2.54
CLK1-213ENST00000492793 ITSN2Q9NZM3 1697 aa-0.84□□□□□ -2.54
CLK1-213ENST00000492793 NRAPQ86VF7 1730 aa-0.85□□□□□ -2.55
CLK1-213ENST00000492793 BPTFQ12830 3046 aa-0.85□□□□□ -2.55
CLK1-213ENST00000492793 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.86□□□□□ -2.55
CLK1-213ENST00000492793 PARP4Q9UKK3 1724 aaKnown RBP-0.86□□□□□ -2.55
CLK1-213ENST00000492793 TRIOO75962 3097 aa-0.87□□□□□ -2.55
CLK1-213ENST00000492793 ATXN8Q156A1 80 aa-0.87□□□□□ -2.55
CLK1-213ENST00000492793 HILPDAQ9Y5L2 63 aa-0.87□□□□□ -2.55
CLK1-213ENST00000492793 LRRIQ1Q96JM4 1722 aa-0.87□□□□□ -2.55
CLK1-213ENST00000492793 TOGARAM1Q9Y4F4 1720 aa-0.87□□□□□ -2.55
CLK1-213ENST00000492793 KRTAP19-5Q3LI72 72 aa-0.88□□□□□ -2.55
CLK1-213ENST00000492793 LAMA3Q16787 3333 aa-0.88□□□□□ -2.55
CLK1-213ENST00000492793 ITPR1Q14643 2758 aa-0.88□□□□□ -2.55
CLK1-213ENST00000492793 KIF1AQ12756 1690 aa-0.88□□□□□ -2.55
CLK1-213ENST00000492793 NHSQ6T4R5 1651 aa-0.88□□□□□ -2.55
CLK1-213ENST00000492793 RIF1Q5UIP0 2472 aaKnown RBP-0.89□□□□□ -2.55
CLK1-213ENST00000492793 DYNC1H1Q14204 4646 aaKnown RBP-0.89□□□□□ -2.55
CLK1-213ENST00000492793 IGLV5-48A0A075B6I7 105 aa-0.89□□□□□ -2.55
CLK1-213ENST00000492793 DEFB114Q30KQ6 69 aa-0.89□□□□□ -2.55
CLK1-213ENST00000492793 NCBP2-AS2Q69YL0 99 aa-0.89□□□□□ -2.55
CLK1-213ENST00000492793 C6orf48Q9UBA6 75 aa-0.89□□□□□ -2.55
CLK1-213ENST00000492793 CDC42BPGQ6DT37 1551 aa-0.89□□□□□ -2.55
CLK1-213ENST00000492793 RANBP2P49792 3224 aaKnown RBP-0.89□□□□□ -2.55
CLK1-213ENST00000492793 A0A0C4DFX4 3053 aa-0.9□□□□□ -2.55
CLK1-213ENST00000492793 MT1HP80294 61 aa-0.9□□□□□ -2.55
CLK1-213ENST00000492793 KRTAP19-6Q3LI70 58 aa-0.9□□□□□ -2.55
CLK1-213ENST00000492793 MYO5CQ9NQX4 1742 aa-0.9□□□□□ -2.55
CLK1-213ENST00000492793 ABCC6O95255 1503 aa-0.91□□□□□ -2.56
CLK1-213ENST00000492793 SRCAPQ6ZRS2 3230 aa-0.92□□□□□ -2.56
CLK1-213ENST00000492793 MMP24-AS1A0A0U1RRL7 71 aa-0.92□□□□□ -2.56
CLK1-213ENST00000492793 SFTA3P0C7M3 94 aa-0.92□□□□□ -2.56
CLK1-213ENST00000492793 FCER1GP30273 86 aa-0.92□□□□□ -2.56
CLK1-213ENST00000492793 RELNP78509 3460 aa-0.92□□□□□ -2.56
CLK1-213ENST00000492793 IQGAP3Q86VI3 1631 aa-0.93□□□□□ -2.56
CLK1-213ENST00000492793 SPENQ96T58 3664 aaKnown RBP-0.93□□□□□ -2.56
CLK1-213ENST00000492793 SPTBN5Q9NRC6 3674 aaKnown RBP-0.93□□□□□ -2.56
CLK1-213ENST00000492793 GNG13Q9P2W3 67 aa-0.93□□□□□ -2.56
CLK1-213ENST00000492793 UGGT2Q9NYU1 1516 aa-0.94□□□□□ -2.56
CLK1-213ENST00000492793 TEX15Q9BXT5 2789 aa-0.94□□□□□ -2.56
CLK1-213ENST00000492793 DNMBPQ6XZF7 1577 aa-0.94□□□□□ -2.56
CLK1-213ENST00000492793 H3BUA1 57 aa-0.94□□□□□ -2.56
CLK1-213ENST00000492793 DEFB1P60022 68 aa-0.94□□□□□ -2.56
CLK1-213ENST00000492793 SMCO4Q9NRQ5 59 aa-0.94□□□□□ -2.56
CLK1-213ENST00000492793 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.94□□□□□ -2.56
CLK1-213ENST00000492793 DUOX2Q9NRD8 1548 aa-0.94□□□□□ -2.56
CLK1-213ENST00000492793 TNP1P09430 55 aa-0.95□□□□□ -2.56
CLK1-213ENST00000492793 CMYA5Q8N3K9 4069 aa-0.95□□□□□ -2.56
CLK1-213ENST00000492793 ASXL1Q8IXJ9 1541 aa-0.95□□□□□ -2.56
CLK1-213ENST00000492793 C3P01024 1663 aa-0.96□□□□□ -2.56
CLK1-213ENST00000492793 PDCD5O14737 125 aa-0.96□□□□□ -2.56
CLK1-213ENST00000492793 MT1HL1P0DM35 61 aa-0.96□□□□□ -2.56
CLK1-213ENST00000492793 MYO15AQ9UKN7 3530 aa-0.96□□□□□ -2.56
CLK1-213ENST00000492793 TLN2Q9Y4G6 2542 aa-0.96□□□□□ -2.56
CLK1-213ENST00000492793 ABCA9Q8IUA7 1624 aa-0.97□□□□□ -2.56
CLK1-213ENST00000492793 EYSQ5T1H1 3165 aa-0.97□□□□□ -2.56
CLK1-213ENST00000492793 CHD7Q9P2D1 2997 aa-0.97□□□□□ -2.56
CLK1-213ENST00000492793 DMXL2Q8TDJ6 3036 aa-0.97□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms