RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 SMIM15Q7Z3B0 74 aa1.29□□□□□ -2.2
UBR4-215ENST00000492606 C5orf17Q8NAS9 161 aa1.29□□□□□ -2.2
UBR4-215ENST00000492606 C14orf144Q96I85 54 aa1.29□□□□□ -2.2
UBR4-215ENST00000492606 ST20Q9HBF5 79 aa1.29□□□□□ -2.2
UBR4-215ENST00000492606 EPDR1Q9UM22 224 aa1.29□□□□□ -2.2
UBR4-215ENST00000492606 TMSB15BA0A087X1C1 80 aa1.28□□□□□ -2.2
UBR4-215ENST00000492606 DLEU1O43261 78 aa1.28□□□□□ -2.2
UBR4-215ENST00000492606 LEPROTL1O95214 131 aa1.28□□□□□ -2.2
UBR4-215ENST00000492606 ZNF25P17030 456 aaPredicted RBP1.28□□□□□ -2.2
UBR4-215ENST00000492606 AKR1C3P42330 323 aa1.28□□□□□ -2.2
UBR4-215ENST00000492606 UBE2L3P68036 154 aaKnown RBP1.28□□□□□ -2.2
UBR4-215ENST00000492606 HBBP68871 147 aa1.28□□□□□ -2.2
UBR4-215ENST00000492606 Q5XG85 94 aa1.28□□□□□ -2.2
UBR4-215ENST00000492606 SPANXDQ9BXN6 97 aa1.28□□□□□ -2.2
UBR4-215ENST00000492606 TMEM191AQ9H0A3 160 aa1.28□□□□□ -2.2
UBR4-215ENST00000492606 OTORQ9NRC9 128 aa1.28□□□□□ -2.2
UBR4-215ENST00000492606 SPANXA1Q9NS26 97 aa1.28□□□□□ -2.2
UBR4-215ENST00000492606 V9GYV3 84 aa1.28□□□□□ -2.2
UBR4-215ENST00000492606 TRAV13-1A0A0B4J241 112 aa1.27□□□□□ -2.21
UBR4-215ENST00000492606 A0A1B0GUT8 65 aa1.27□□□□□ -2.21
UBR4-215ENST00000492606 A0A1B0GV50 99 aa1.27□□□□□ -2.21
UBR4-215ENST00000492606 FABP5P3A8MUU1 101 aa1.27□□□□□ -2.21
UBR4-215ENST00000492606 HIGD1CA8MV81 97 aa1.27□□□□□ -2.21
UBR4-215ENST00000492606 J3QR89 54 aa1.27□□□□□ -2.21
UBR4-215ENST00000492606 K7ERU9 68 aa1.27□□□□□ -2.21
UBR4-215ENST00000492606 NPYP01303 97 aa1.27□□□□□ -2.21
UBR4-215ENST00000492606 IGLC3P0DOY3 106 aa1.27□□□□□ -2.21
UBR4-215ENST00000492606 KRTAP12-1P59990 96 aa1.27□□□□□ -2.21
UBR4-215ENST00000492606 SEC11AP67812 179 aa1.27□□□□□ -2.21
UBR4-215ENST00000492606 PMAIP1Q13794 54 aa1.27□□□□□ -2.21
UBR4-215ENST00000492606 SOSTDC1Q6X4U4 206 aa1.27□□□□□ -2.21
UBR4-215ENST00000492606 GTF2H5Q6ZYL4 71 aa1.27□□□□□ -2.21
UBR4-215ENST00000492606 AP1S3Q96PC3 154 aa1.27□□□□□ -2.21
UBR4-215ENST00000492606 NXT2Q9NPJ8 142 aaKnown RBP1.27□□□□□ -2.21
UBR4-215ENST00000492606 TRBV20OR9-2A0A075B6H5 130 aa1.26□□□□□ -2.21
UBR4-215ENST00000492606 LINC01546A6NGU7 62 aa1.26□□□□□ -2.21
UBR4-215ENST00000492606 F8W1H4 67 aa1.26□□□□□ -2.21
UBR4-215ENST00000492606 SYS1-DBNDD2H3BUS1 97 aa1.26□□□□□ -2.21
UBR4-215ENST00000492606 MGPP08493 103 aa1.26□□□□□ -2.21
UBR4-215ENST00000492606 C3orf79P0CE67 100 aa1.26□□□□□ -2.21
UBR4-215ENST00000492606 SMIM17P0DL12 118 aa1.26□□□□□ -2.21
UBR4-215ENST00000492606 CRIP1P50238 77 aa1.26□□□□□ -2.21
UBR4-215ENST00000492606 KRTDAPP60985 99 aa1.26□□□□□ -2.21
UBR4-215ENST00000492606 KRTAP13-4Q3LI77 160 aa1.26□□□□□ -2.21
UBR4-215ENST00000492606 SPATA45Q537H7 98 aa1.26□□□□□ -2.21
UBR4-215ENST00000492606 LINC01545Q5VT33 79 aa1.26□□□□□ -2.21
UBR4-215ENST00000492606 C18orf32Q8TCD1 76 aa1.26□□□□□ -2.21
UBR4-215ENST00000492606 C20orf78Q9BR46 151 aa1.26□□□□□ -2.21
UBR4-215ENST00000492606 CNFNQ9BYD5 112 aa1.26□□□□□ -2.21
UBR4-215ENST00000492606 A0A1B0GV90 55 aa1.25□□□□□ -2.21
UBR4-215ENST00000492606 H3BRM9 83 aa1.25□□□□□ -2.21
UBR4-215ENST00000492606 COX8AP10176 69 aa1.25□□□□□ -2.21
UBR4-215ENST00000492606 PLNP26678 52 aa1.25□□□□□ -2.21
UBR4-215ENST00000492606 FCER1GP30273 86 aa1.25□□□□□ -2.21
UBR4-215ENST00000492606 CKS2P33552 79 aa1.25□□□□□ -2.21
UBR4-215ENST00000492606 LYRM7Q5U5X0 104 aa1.25□□□□□ -2.21
UBR4-215ENST00000492606 COPS9Q8WXC6 57 aa1.25□□□□□ -2.21
UBR4-215ENST00000492606 SNHG12Q9BXW3 62 aa1.25□□□□□ -2.21
UBR4-215ENST00000492606 RNASE7Q9H1E1 156 aaKnown RBP1.25□□□□□ -2.21
UBR4-215ENST00000492606 PRO1933Q9H354 126 aa1.25□□□□□ -2.21
UBR4-215ENST00000492606 SPANXCQ9NY87 97 aa1.25□□□□□ -2.21
UBR4-215ENST00000492606 HIGD1BQ9P298 99 aa1.25□□□□□ -2.21
UBR4-215ENST00000492606 TRAV12-1A0A0B4J245 112 aa1.24□□□□□ -2.21
UBR4-215ENST00000492606 HBDP02042 147 aa1.24□□□□□ -2.21
UBR4-215ENST00000492606 SMIM13P0DJ93 91 aa1.24□□□□□ -2.21
UBR4-215ENST00000492606 SCGB1A1P11684 91 aa1.24□□□□□ -2.21
UBR4-215ENST00000492606 FABP2P12104 132 aa1.24□□□□□ -2.21
UBR4-215ENST00000492606 HSD52Q0P140 79 aa1.24□□□□□ -2.21
UBR4-215ENST00000492606 BATFQ16520 125 aa1.24□□□□□ -2.21
UBR4-215ENST00000492606 Q8N8P6 123 aa1.24□□□□□ -2.21
UBR4-215ENST00000492606 IFI27L1Q96BM0 104 aa1.24□□□□□ -2.21
UBR4-215ENST00000492606 TMEM141Q96I45 108 aa1.24□□□□□ -2.21
UBR4-215ENST00000492606 PRELID3AQ96N28 172 aa1.24□□□□□ -2.21
UBR4-215ENST00000492606 TIMM21Q9BVV7 248 aa1.24□□□□□ -2.21
UBR4-215ENST00000492606 A0A1B0GW54 56 aa1.23□□□□□ -2.21
UBR4-215ENST00000492606 LEPROTO15243 131 aa1.23□□□□□ -2.21
UBR4-215ENST00000492606 DPM2O94777 84 aa1.23□□□□□ -2.21
UBR4-215ENST00000492606 IGKCP01834 107 aa1.23□□□□□ -2.21
UBR4-215ENST00000492606 IGLC6P0CF74 106 aa1.23□□□□□ -2.21
UBR4-215ENST00000492606 KLKP1Q107X0 134 aa1.23□□□□□ -2.21
UBR4-215ENST00000492606 BVES-AS1Q5T3Y7 98 aa1.23□□□□□ -2.21
UBR4-215ENST00000492606 SFTA2Q6UW10 78 aa1.23□□□□□ -2.21
UBR4-215ENST00000492606 Q6ZUT4 128 aa1.23□□□□□ -2.21
UBR4-215ENST00000492606 TRBV6-5A0A0K0K1A5 114 aa1.22□□□□□ -2.21
UBR4-215ENST00000492606 A0A1W2PPM0 123 aa1.22□□□□□ -2.21
UBR4-215ENST00000492606 D6R8Y8 96 aa1.22□□□□□ -2.21
UBR4-215ENST00000492606 F8VRH5 84 aa1.22□□□□□ -2.21
UBR4-215ENST00000492606 COX6CP09669 75 aa1.22□□□□□ -2.21
UBR4-215ENST00000492606 IFI27P40305 119 aaPredicted RBP1.22□□□□□ -2.21
UBR4-215ENST00000492606 HINT1P49773 126 aaPredicted RBP1.22□□□□□ -2.21
UBR4-215ENST00000492606 OCIAD2Q56VL3 154 aa1.22□□□□□ -2.21
UBR4-215ENST00000492606 SPANXN1Q5VSR9 72 aa1.22□□□□□ -2.21
UBR4-215ENST00000492606 TOMM6Q96B49 74 aa1.22□□□□□ -2.21
UBR4-215ENST00000492606 RPL39LQ96EH5 51 aaKnown RBP1.22□□□□□ -2.21
UBR4-215ENST00000492606 ZNF625Q96I27 306 aaPredicted RBP1.22□□□□□ -2.21
UBR4-215ENST00000492606 SIGMAR1Q99720 223 aa1.22□□□□□ -2.21
UBR4-215ENST00000492606 VPS25Q9BRG1 176 aa1.22□□□□□ -2.21
UBR4-215ENST00000492606 CST9LQ9H4G1 147 aa1.22□□□□□ -2.21
UBR4-215ENST00000492606 CYSLTR1Q9Y271 337 aa1.22□□□□□ -2.21
UBR4-215ENST00000492606 TRAV7A0A075B6U4 112 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms