RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 FAM236DA0A1B0GTK5 79 aa6.89□□□□□ -1.31
GPNMB-213ENST00000492512 FAM236CP0DP71 79 aa6.89□□□□□ -1.31
GPNMB-213ENST00000492512 IGFL1Q6UW32 110 aa6.89□□□□□ -1.31
GPNMB-213ENST00000492512 C20orf166-AS1Q96NR2 134 aa6.89□□□□□ -1.31
GPNMB-213ENST00000492512 MACF1Q9UPN3 7388 aaKnown RBP6.89□□□□□ -1.31
GPNMB-213ENST00000492512 A0A1B0GX51 115 aa6.88□□□□□ -1.31
GPNMB-213ENST00000492512 A8MUU9 505 aa6.87□□□□□ -1.31
GPNMB-213ENST00000492512 SNCGO76070 127 aa6.87□□□□□ -1.31
GPNMB-213ENST00000492512 DNAL4O96015 105 aa6.85□□□□□ -1.31
GPNMB-213ENST00000492512 VPS25Q9BRG1 176 aa6.85□□□□□ -1.31
GPNMB-213ENST00000492512 SYNE2Q8WXH0 6885 aaKnown RBP6.85□□□□□ -1.31
GPNMB-213ENST00000492512 BAALC-AS2P0C853 105 aa6.83□□□□□ -1.32
GPNMB-213ENST00000492512 Q6ZQY7 126 aa6.83□□□□□ -1.32
GPNMB-213ENST00000492512 FAM218AQ96MZ4 157 aa6.83□□□□□ -1.32
GPNMB-213ENST00000492512 KRTAP19-6Q3LI70 58 aa6.81□□□□□ -1.32
GPNMB-213ENST00000492512 LINC00575Q6W349 94 aa6.81□□□□□ -1.32
GPNMB-213ENST00000492512 hADV29S1A0JD25 119 aa6.8□□□□□ -1.32
GPNMB-213ENST00000492512 H3BQ85 93 aa6.8□□□□□ -1.32
GPNMB-213ENST00000492512 RBM12B-AS1Q9P1G2 102 aa6.8□□□□□ -1.32
GPNMB-213ENST00000492512 SS18L2Q9UHA2 77 aa6.8□□□□□ -1.32
GPNMB-213ENST00000492512 ORMDL1Q9P0S3 153 aa6.79□□□□□ -1.32
GPNMB-213ENST00000492512 GHRHP01286 108 aa6.78□□□□□ -1.32
GPNMB-213ENST00000492512 KRTAP6-3Q3LI67 103 aa6.77□□□□□ -1.33
GPNMB-213ENST00000492512 FAM240AA0A1B0GVK7 77 aa6.76□□□□□ -1.33
GPNMB-213ENST00000492512 KRTAP16-1A8MUX0 517 aa6.75□□□□□ -1.33
GPNMB-213ENST00000492512 TMEM256-PLSCR3K7ERE1 68 aa6.75□□□□□ -1.33
GPNMB-213ENST00000492512 ACYP1P07311 99 aa6.75□□□□□ -1.33
GPNMB-213ENST00000492512 DSCR10P59022 87 aa6.75□□□□□ -1.33
GPNMB-213ENST00000492512 MPLKIPQ8TAP9 179 aa6.75□□□□□ -1.33
GPNMB-213ENST00000492512 HRES1P13985 223 aa6.74□□□□□ -1.33
GPNMB-213ENST00000492512 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.74□□□□□ -1.33
GPNMB-213ENST00000492512 JMJD7-PLA2G4BH0Y9G9 81 aa6.73□□□□□ -1.33
GPNMB-213ENST00000492512 SIGMAR1Q99720 223 aa6.73□□□□□ -1.33
GPNMB-213ENST00000492512 A0A087WSZ3 146 aa6.68□□□□□ -1.34
GPNMB-213ENST00000492512 LINC00313P59037 77 aa6.68□□□□□ -1.34
GPNMB-213ENST00000492512 C21orf62-AS1Q17RA5 79 aa6.68□□□□□ -1.34
GPNMB-213ENST00000492512 SCGB1A1P11684 91 aa6.67□□□□□ -1.34
GPNMB-213ENST00000492512 NOTCH2NLQ7Z3S9 236 aa6.67□□□□□ -1.34
GPNMB-213ENST00000492512 PDE6GP18545 87 aa6.65□□□□□ -1.34
GPNMB-213ENST00000492512 C14orf132Q9NPU4 83 aa6.65□□□□□ -1.34
GPNMB-213ENST00000492512 LOC110117498A0A087WWA1 95 aa6.63□□□□□ -1.35
GPNMB-213ENST00000492512 CCKP06307 115 aa6.63□□□□□ -1.35
GPNMB-213ENST00000492512 RBM3P98179 157 aaKnown RBP6.63□□□□□ -1.35
GPNMB-213ENST00000492512 MT-ATP8P03928 68 aa6.62□□□□□ -1.35
GPNMB-213ENST00000492512 LINC00643Q86TS7 51 aa6.62□□□□□ -1.35
GPNMB-213ENST00000492512 NDUFV3P56181 108 aaKnown RBP6.61□□□□□ -1.35
GPNMB-213ENST00000492512 DSCR8Q96T75 97 aa6.61□□□□□ -1.35
GPNMB-213ENST00000492512 A8MWP4 228 aa6.6□□□□□ -1.35
GPNMB-213ENST00000492512 IGKV4-1P06312 121 aa6.6□□□□□ -1.35
GPNMB-213ENST00000492512 PCP4P48539 62 aa6.59□□□□□ -1.35
GPNMB-213ENST00000492512 Q8N9P0 234 aaPredicted RBP6.59□□□□□ -1.35
GPNMB-213ENST00000492512 Q6ZQT0 140 aa6.58□□□□□ -1.36
GPNMB-213ENST00000492512 IMUPQ9GZP8 106 aa6.58□□□□□ -1.36
GPNMB-213ENST00000492512 TRBV7-4A0A0J9YYF1 115 aa6.56□□□□□ -1.36
GPNMB-213ENST00000492512 A0A1B0GV72 72 aa6.56□□□□□ -1.36
GPNMB-213ENST00000492512 IGHV6-1A0A0B4J1U7 121 aa6.54□□□□□ -1.36
GPNMB-213ENST00000492512 A0A1W2PNM2 257 aa6.54□□□□□ -1.36
GPNMB-213ENST00000492512 ATP5EP2Q5VTU8 51 aa6.54□□□□□ -1.36
GPNMB-213ENST00000492512 A0A1B0GW54 56 aa6.53□□□□□ -1.36
GPNMB-213ENST00000492512 UBL5Q9BZL1 73 aa6.53□□□□□ -1.36
GPNMB-213ENST00000492512 SPINK7P58062 85 aa6.52□□□□□ -1.37
GPNMB-213ENST00000492512 DEFB116Q30KQ4 102 aa6.52□□□□□ -1.37
GPNMB-213ENST00000492512 KRTAP20-1Q3LI63 56 aa6.49□□□□□ -1.37
GPNMB-213ENST00000492512 ZCCHC13Q8WW36 166 aaKnown RBP6.49□□□□□ -1.37
GPNMB-213ENST00000492512 LINC00472Q9H8W2 130 aa6.47□□□□□ -1.37
GPNMB-213ENST00000492512 MUC12Q9UKN1 5478 aa6.47□□□□□ -1.37
GPNMB-213ENST00000492512 NEBP20929 6669 aa6.47□□□□□ -1.37
GPNMB-213ENST00000492512 C8orf87E5RJ46 101 aa6.46□□□□□ -1.38
GPNMB-213ENST00000492512 WFDC13Q8IUB5 93 aa6.46□□□□□ -1.38
GPNMB-213ENST00000492512 IGKV3D-7A0A0C4DH55 119 aa6.45□□□□□ -1.38
GPNMB-213ENST00000492512 Q6ZVQ6 151 aa6.45□□□□□ -1.38
GPNMB-213ENST00000492512 CXCL6P80162 114 aa6.44□□□□□ -1.38
GPNMB-213ENST00000492512 A0A1B0GVX0 72 aa6.43□□□□□ -1.38
GPNMB-213ENST00000492512 ANAPC13Q9BS18 74 aa6.43□□□□□ -1.38
GPNMB-213ENST00000492512 FAM236AA0A1B0GUQ0 79 aa6.41□□□□□ -1.38
GPNMB-213ENST00000492512 FAM236BA0A1B0GV22 79 aa6.41□□□□□ -1.38
GPNMB-213ENST00000492512 NREPQ16612 68 aa6.41□□□□□ -1.38
GPNMB-213ENST00000492512 HIST1H4AP62805 103 aaKnown RBP6.39□□□□□ -1.39
GPNMB-213ENST00000492512 ATOX1O00244 68 aa6.38□□□□□ -1.39
GPNMB-213ENST00000492512 A6NN06 94 aa6.37□□□□□ -1.39
GPNMB-213ENST00000492512 BPY2O14599 106 aa6.35□□□□□ -1.39
GPNMB-213ENST00000492512 A0A087WVE0 104 aa6.33□□□□□ -1.4
GPNMB-213ENST00000492512 H1FX-AS1Q4G0G2 97 aa6.33□□□□□ -1.4
GPNMB-213ENST00000492512 J3KT08 172 aa6.31□□□□□ -1.4
GPNMB-213ENST00000492512 SMIM20Q8N5G0 67 aa6.31□□□□□ -1.4
GPNMB-213ENST00000492512 NDUFB1O75438 58 aa6.29□□□□□ -1.4
GPNMB-213ENST00000492512 UQCRQO14949 82 aa6.28□□□□□ -1.4
GPNMB-213ENST00000492512 COX7CP15954 63 aa6.28□□□□□ -1.4
GPNMB-213ENST00000492512 SERP2Q8N6R1 65 aa6.28□□□□□ -1.4
GPNMB-213ENST00000492512 KRTAP5-9P26371 169 aa6.27□□□□□ -1.41
GPNMB-213ENST00000492512 CCDC179H3BU77 68 aa6.25□□□□□ -1.41
GPNMB-213ENST00000492512 C8orf17Q9NRJ1 99 aa6.25□□□□□ -1.41
GPNMB-213ENST00000492512 TRAV7A0A075B6U4 112 aa6.24□□□□□ -1.41
GPNMB-213ENST00000492512 MT1BP07438 61 aa6.24□□□□□ -1.41
GPNMB-213ENST00000492512 Q5VV11 94 aa6.24□□□□□ -1.41
GPNMB-213ENST00000492512 KMT2DO14686 5537 aa6.24□□□□□ -1.41
GPNMB-213ENST00000492512 MDN1Q9NU22 5596 aa6.23□□□□□ -1.41
GPNMB-213ENST00000492512 Q8N9L7 120 aa6.22□□□□□ -1.41
GPNMB-213ENST00000492512 KRTAP2-3P0C7H8 128 aa6.2□□□□□ -1.42
GPNMB-213ENST00000492512 KRTAP10-5P60370 271 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms