RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 Q8NDZ9 215 aa2.8□□□□□ -1.96
TRA2B-215ENST00000492417 A8MWP4 228 aa2.8□□□□□ -1.96
TRA2B-215ENST00000492417 FP248Q71RG6 208 aaPredicted RBP2.8□□□□□ -1.96
TRA2B-215ENST00000492417 CDC42SE1Q9NRR8 79 aa2.8□□□□□ -1.96
TRA2B-215ENST00000492417 MIR22HGQ0VDD5 57 aa2.8□□□□□ -1.96
TRA2B-215ENST00000492417 Q1T7F1 81 aa2.8□□□□□ -1.96
TRA2B-215ENST00000492417 CYSTM1Q9H1C7 97 aa2.8□□□□□ -1.96
TRA2B-215ENST00000492417 KCNQ1DNQ9H478 68 aa2.79□□□□□ -1.96
TRA2B-215ENST00000492417 PLAC8Q9NZF1 115 aa2.78□□□□□ -1.96
TRA2B-215ENST00000492417 KMT2CQ8NEZ4 4911 aaKnown RBP2.78□□□□□ -1.96
TRA2B-215ENST00000492417 OBSCN-AS1Q96MR7 158 aa2.78□□□□□ -1.97
TRA2B-215ENST00000492417 OCR1Q9BZK8 76 aa2.78□□□□□ -1.97
TRA2B-215ENST00000492417 Q8N377 158 aa2.77□□□□□ -1.97
TRA2B-215ENST00000492417 SPANXA2-OT1Q8N9U9 137 aa2.77□□□□□ -1.97
TRA2B-215ENST00000492417 MRPL34Q9BQ48 92 aaKnown RBP2.77□□□□□ -1.97
TRA2B-215ENST00000492417 OXTP01178 125 aa2.76□□□□□ -1.97
TRA2B-215ENST00000492417 FAM229BQ4G0N7 80 aa2.76□□□□□ -1.97
TRA2B-215ENST00000492417 A0A1W2PNM2 257 aa2.75□□□□□ -1.97
TRA2B-215ENST00000492417 IGFL1Q6UW32 110 aa2.75□□□□□ -1.97
TRA2B-215ENST00000492417 LINC00313P59037 77 aa2.75□□□□□ -1.97
TRA2B-215ENST00000492417 LINC00304Q8N9R0 145 aa2.75□□□□□ -1.97
TRA2B-215ENST00000492417 SPRR4Q96PI1 79 aa2.75□□□□□ -1.97
TRA2B-215ENST00000492417 KRTAP11-1Q8IUC1 163 aa2.74□□□□□ -1.97
TRA2B-215ENST00000492417 C8orf17Q9NRJ1 99 aa2.74□□□□□ -1.97
TRA2B-215ENST00000492417 HUWE1Q7Z6Z7 4374 aaKnown RBP2.74□□□□□ -1.97
TRA2B-215ENST00000492417 IGLV5-37A0A075B6J1 123 aa2.74□□□□□ -1.97
TRA2B-215ENST00000492417 Q8N9P0 234 aaPredicted RBP2.74□□□□□ -1.97
TRA2B-215ENST00000492417 CRIPTQ9P021 101 aa2.74□□□□□ -1.97
TRA2B-215ENST00000492417 DNAH3Q8TD57 4116 aa2.74□□□□□ -1.97
TRA2B-215ENST00000492417 KRTAP16-1A8MUX0 517 aa2.74□□□□□ -1.97
TRA2B-215ENST00000492417 PRAC1Q96KF2 57 aa2.74□□□□□ -1.97
TRA2B-215ENST00000492417 Q75L30 129 aa2.73□□□□□ -1.97
TRA2B-215ENST00000492417 PRKDCP78527 4128 aaKnown RBP2.72□□□□□ -1.97
TRA2B-215ENST00000492417 C9orf92A6NGG3 77 aa2.72□□□□□ -1.97
TRA2B-215ENST00000492417 ASB16-AS1Q495Z4 193 aa2.72□□□□□ -1.97
TRA2B-215ENST00000492417 KRTAP7-1Q8IUC3 87 aa2.72□□□□□ -1.97
TRA2B-215ENST00000492417 DNAH9Q9NYC9 4486 aa2.72□□□□□ -1.97
TRA2B-215ENST00000492417 IGLV5-48A0A075B6I7 105 aa2.71□□□□□ -1.97
TRA2B-215ENST00000492417 Q5VV11 94 aa2.71□□□□□ -1.97
TRA2B-215ENST00000492417 A0A1B0GVX0 72 aa2.71□□□□□ -1.98
TRA2B-215ENST00000492417 IGLV7-46A0A075B6I9 117 aa2.7□□□□□ -1.98
TRA2B-215ENST00000492417 DSCR10P59022 87 aa2.7□□□□□ -1.98
TRA2B-215ENST00000492417 CSMD3Q7Z407 3707 aa2.7□□□□□ -1.98
TRA2B-215ENST00000492417 LINC01558Q9Y6Z2 57 aa2.7□□□□□ -1.98
TRA2B-215ENST00000492417 HYDINQ4G0P3 5121 aa2.7□□□□□ -1.98
TRA2B-215ENST00000492417 HECTD4Q9Y4D8 3996 aa2.7□□□□□ -1.98
TRA2B-215ENST00000492417 Q8N1X5 172 aa2.7□□□□□ -1.98
TRA2B-215ENST00000492417 SPRR1AP35321 89 aa2.69□□□□□ -1.98
TRA2B-215ENST00000492417 A0A087X002 238 aa2.69□□□□□ -1.98
TRA2B-215ENST00000492417 Q96NJ1 140 aa2.69□□□□□ -1.98
TRA2B-215ENST00000492417 DNAH1Q9P2D7 4330 aa2.68□□□□□ -1.98
TRA2B-215ENST00000492417 EPPK1P58107 5090 aaKnown RBP2.68□□□□□ -1.98
TRA2B-215ENST00000492417 A0A1B0GVY2 172 aa2.68□□□□□ -1.98
TRA2B-215ENST00000492417 LUZP6Q538Z0 58 aa2.68□□□□□ -1.98
TRA2B-215ENST00000492417 CSAG1Q6PB30 78 aa2.68□□□□□ -1.98
TRA2B-215ENST00000492417 SPINK7P58062 85 aa2.67□□□□□ -1.98
TRA2B-215ENST00000492417 CAMK2N1Q7Z7J9 78 aa2.67□□□□□ -1.98
TRA2B-215ENST00000492417 DNAH7Q8WXX0 4024 aa2.67□□□□□ -1.98
TRA2B-215ENST00000492417 Q6ZSA8 131 aa2.66□□□□□ -1.98
TRA2B-215ENST00000492417 NOTCH2NLQ7Z3S9 236 aa2.66□□□□□ -1.98
TRA2B-215ENST00000492417 DYNC2H1Q8NCM8 4307 aaKnown RBP2.66□□□□□ -1.98
TRA2B-215ENST00000492417 RYR2Q92736 4967 aa2.65□□□□□ -1.98
TRA2B-215ENST00000492417 KRTAP4-16G5E9R7 235 aaPredicted RBP2.65□□□□□ -1.98
TRA2B-215ENST00000492417 LCE2BO14633 110 aa2.65□□□□□ -1.99
TRA2B-215ENST00000492417 PCLOQ9Y6V0 5065 aa2.65□□□□□ -1.99
TRA2B-215ENST00000492417 A0A0D9SG42 100 aa2.65□□□□□ -1.99
TRA2B-215ENST00000492417 PLECQ15149 4684 aaKnown RBP2.64□□□□□ -1.99
TRA2B-215ENST00000492417 HRES1P13985 223 aa2.64□□□□□ -1.99
TRA2B-215ENST00000492417 A0A1B0GU33 70 aa2.63□□□□□ -1.99
TRA2B-215ENST00000492417 STARD9Q9P2P6 4700 aa2.62□□□□□ -1.99
TRA2B-215ENST00000492417 MMP24-AS1A0A0U1RRL7 71 aa2.62□□□□□ -1.99
TRA2B-215ENST00000492417 KRTAP13-2Q52LG2 175 aa2.62□□□□□ -1.99
TRA2B-215ENST00000492417 LCE2CQ5TA81 110 aa2.62□□□□□ -1.99
TRA2B-215ENST00000492417 SPRR1BP22528 89 aa2.61□□□□□ -1.99
TRA2B-215ENST00000492417 COX6B2Q6YFQ2 88 aa2.61□□□□□ -1.99
TRA2B-215ENST00000492417 DMAC1Q96GE9 116 aa2.61□□□□□ -1.99
TRA2B-215ENST00000492417 KRTAP13-1Q8IUC0 172 aa2.6□□□□□ -1.99
TRA2B-215ENST00000492417 FRAS1Q86XX4 4008 aa2.6□□□□□ -1.99
TRA2B-215ENST00000492417 BIRC6Q9NR09 4857 aa2.6□□□□□ -1.99
TRA2B-215ENST00000492417 A6NN06 94 aa2.59□□□□□ -1.99
TRA2B-215ENST00000492417 LINC00483Q53H64 154 aa2.59□□□□□ -1.99
TRA2B-215ENST00000492417 ZCCHC13Q8WW36 166 aaKnown RBP2.58□□□□□ -2
TRA2B-215ENST00000492417 KRTAP4-5Q9BYR2 181 aa2.58□□□□□ -2
TRA2B-215ENST00000492417 LINC00472Q9H8W2 130 aa2.58□□□□□ -2
TRA2B-215ENST00000492417 SACSQ9NZJ4 4579 aa2.58□□□□□ -2
TRA2B-215ENST00000492417 KRTAP1-4P0C5Y4 121 aa2.58□□□□□ -2
TRA2B-215ENST00000492417 KRTAP23-1A1A580 65 aa2.57□□□□□ -2
TRA2B-215ENST00000492417 A8MU10 97 aa2.57□□□□□ -2
TRA2B-215ENST00000492417 HERC2O95714 4834 aa2.55□□□□□ -2
TRA2B-215ENST00000492417 Q5W150 140 aa2.55□□□□□ -2
TRA2B-215ENST00000492417 ADM2Q7Z4H4 148 aa2.55□□□□□ -2
TRA2B-215ENST00000492417 KMT2AQ03164 3969 aa2.55□□□□□ -2
TRA2B-215ENST00000492417 DNAH5Q8TE73 4624 aa2.54□□□□□ -2
TRA2B-215ENST00000492417 KRTAP29-1A8MX34 341 aaPredicted RBP2.54□□□□□ -2
TRA2B-215ENST00000492417 SPATA8Q6RVD6 105 aa2.54□□□□□ -2
TRA2B-215ENST00000492417 DNAH11Q96DT5 4516 aa2.54□□□□□ -2
TRA2B-215ENST00000492417 DNAH10Q8IVF4 4471 aa2.54□□□□□ -2
TRA2B-215ENST00000492417 ROMO1P60602 79 aa2.53□□□□□ -2
TRA2B-215ENST00000492417 M0R2T5 61 aa2.53□□□□□ -2.01
TRA2B-215ENST00000492417 RPL37P61927 97 aaKnown RBP2.53□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms