RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 PLAC8Q9NZF1 115 aa6.22□□□□□ -1.41
HDAC9-225ENST00000490851 CDK2AP2O75956 126 aa6.21□□□□□ -1.41
HDAC9-225ENST00000490851 ZCCHC13Q8WW36 166 aaKnown RBP6.21□□□□□ -1.42
HDAC9-225ENST00000490851 PSORS1C2Q9UIG4 136 aa6.2□□□□□ -1.42
HDAC9-225ENST00000490851 IGLV5-48A0A075B6I7 105 aa6.2□□□□□ -1.42
HDAC9-225ENST00000490851 LOC110117498A0A087WWA1 95 aa6.2□□□□□ -1.42
HDAC9-225ENST00000490851 KRTAP10-1P60331 282 aa6.2□□□□□ -1.42
HDAC9-225ENST00000490851 C1orf137Q5JT78 98 aa6.19□□□□□ -1.42
HDAC9-225ENST00000490851 PKHD1P08F94 4074 aa6.19□□□□□ -1.42
HDAC9-225ENST00000490851 CIRBP-AS1Q8TBR5 109 aa6.19□□□□□ -1.42
HDAC9-225ENST00000490851 KMT2CQ8NEZ4 4911 aaKnown RBP6.18□□□□□ -1.42
HDAC9-225ENST00000490851 NDUFB1O75438 58 aa6.18□□□□□ -1.42
HDAC9-225ENST00000490851 A0A0G2JQZ4 141 aa6.17□□□□□ -1.42
HDAC9-225ENST00000490851 SMIM29Q86T20 159 aa6.17□□□□□ -1.42
HDAC9-225ENST00000490851 PDE6GP18545 87 aa6.16□□□□□ -1.42
HDAC9-225ENST00000490851 KRTAP13-1Q8IUC0 172 aa6.16□□□□□ -1.42
HDAC9-225ENST00000490851 ROMO1P60602 79 aa6.16□□□□□ -1.42
HDAC9-225ENST00000490851 RYR2Q92736 4967 aa6.15□□□□□ -1.43
HDAC9-225ENST00000490851 ADM2Q7Z4H4 148 aa6.14□□□□□ -1.43
HDAC9-225ENST00000490851 Q6ZSA8 131 aa6.13□□□□□ -1.43
HDAC9-225ENST00000490851 KRTAP16-1A8MUX0 517 aa6.12□□□□□ -1.43
HDAC9-225ENST00000490851 LRP1BQ9NZR2 4599 aa6.12□□□□□ -1.43
HDAC9-225ENST00000490851 A0A1W2PNM2 257 aa6.11□□□□□ -1.43
HDAC9-225ENST00000490851 LINC00208Q96KT6 92 aa6.11□□□□□ -1.43
HDAC9-225ENST00000490851 ANAPC11Q9NYG5 84 aa6.11□□□□□ -1.43
HDAC9-225ENST00000490851 ZNF861PO60384 105 aa6.11□□□□□ -1.43
HDAC9-225ENST00000490851 SPANXA2-OT1Q8N9U9 137 aa6.11□□□□□ -1.43
HDAC9-225ENST00000490851 IGLV9-49A0A0B4J1Y8 123 aa6.1□□□□□ -1.43
HDAC9-225ENST00000490851 IGFL1Q6UW32 110 aa6.1□□□□□ -1.43
HDAC9-225ENST00000490851 LINC01558Q9Y6Z2 57 aa6.1□□□□□ -1.43
HDAC9-225ENST00000490851 IGLV7-43P04211 117 aa6.1□□□□□ -1.43
HDAC9-225ENST00000490851 SPRR4Q96PI1 79 aa6.1□□□□□ -1.43
HDAC9-225ENST00000490851 Q8NBF4 154 aa6.09□□□□□ -1.43
HDAC9-225ENST00000490851 SPRR1BP22528 89 aa6.08□□□□□ -1.44
HDAC9-225ENST00000490851 DYNC1H1Q14204 4646 aaKnown RBP6.07□□□□□ -1.44
HDAC9-225ENST00000490851 A0A1B0GVY2 172 aa6.06□□□□□ -1.44
HDAC9-225ENST00000490851 IGLV8-61A0A075B6I0 122 aa6.05□□□□□ -1.44
HDAC9-225ENST00000490851 VPS13BQ7Z7G8 4022 aa6.05□□□□□ -1.44
HDAC9-225ENST00000490851 IGKV4-1P06312 121 aa6.05□□□□□ -1.44
HDAC9-225ENST00000490851 A0A087WSZ3 146 aa6.04□□□□□ -1.44
HDAC9-225ENST00000490851 SMR3BP02814 79 aaPredicted RBP6.04□□□□□ -1.44
HDAC9-225ENST00000490851 LINC00483Q53H64 154 aa6.04□□□□□ -1.44
HDAC9-225ENST00000490851 CSAG1Q6PB30 78 aa6.04□□□□□ -1.44
HDAC9-225ENST00000490851 Q8N9L7 120 aa6.04□□□□□ -1.44
HDAC9-225ENST00000490851 RYR3Q15413 4870 aa6.03□□□□□ -1.44
HDAC9-225ENST00000490851 DEFB116Q30KQ4 102 aa6.02□□□□□ -1.45
HDAC9-225ENST00000490851 SPINK7P58062 85 aa6□□□□□ -1.45
HDAC9-225ENST00000490851 MIR22HGQ0VDD5 57 aa5.99□□□□□ -1.45
HDAC9-225ENST00000490851 RPL37AP61513 92 aaKnown RBP5.98□□□□□ -1.45
HDAC9-225ENST00000490851 APOBP04114 4563 aaKnown RBP5.98□□□□□ -1.45
HDAC9-225ENST00000490851 SPAG11AQ6PDA7 123 aa5.97□□□□□ -1.45
HDAC9-225ENST00000490851 FAT1Q14517 4588 aa5.97□□□□□ -1.45
HDAC9-225ENST00000490851 PRR4Q16378 134 aa5.96□□□□□ -1.45
HDAC9-225ENST00000490851 H3BPC8 53 aa5.94□□□□□ -1.46
HDAC9-225ENST00000490851 K7EQZ3 153 aa5.94□□□□□ -1.46
HDAC9-225ENST00000490851 P0C880 135 aa5.94□□□□□ -1.46
HDAC9-225ENST00000490851 DSCR10P59022 87 aa5.94□□□□□ -1.46
HDAC9-225ENST00000490851 KRTAP13-2Q52LG2 175 aa5.93□□□□□ -1.46
HDAC9-225ENST00000490851 H0Y9P7 68 aa5.92□□□□□ -1.46
HDAC9-225ENST00000490851 COA5Q86WW8 74 aa5.92□□□□□ -1.46
HDAC9-225ENST00000490851 KRTAP1-4P0C5Y4 121 aa5.91□□□□□ -1.46
HDAC9-225ENST00000490851 LINC00472Q9H8W2 130 aa5.89□□□□□ -1.47
HDAC9-225ENST00000490851 C8orf17Q9NRJ1 99 aa5.88□□□□□ -1.47
HDAC9-225ENST00000490851 SPINK6Q6UWN8 80 aa5.88□□□□□ -1.47
HDAC9-225ENST00000490851 SSBP3-AS1Q7Z2R9 100 aa5.88□□□□□ -1.47
HDAC9-225ENST00000490851 A8MWP4 228 aa5.87□□□□□ -1.47
HDAC9-225ENST00000490851 LUZP6Q538Z0 58 aa5.87□□□□□ -1.47
HDAC9-225ENST00000490851 Q96NJ1 140 aa5.87□□□□□ -1.47
HDAC9-225ENST00000490851 WFDC13Q8IUB5 93 aa5.86□□□□□ -1.47
HDAC9-225ENST00000490851 KRTAP10-4P60372 401 aaPredicted RBP5.86□□□□□ -1.47
HDAC9-225ENST00000490851 SPATA8Q6RVD6 105 aa5.86□□□□□ -1.47
HDAC9-225ENST00000490851 TYMSOSQ8TAI1 123 aa5.86□□□□□ -1.47
HDAC9-225ENST00000490851 KRTAP25-1Q3LHN0 102 aa5.85□□□□□ -1.47
HDAC9-225ENST00000490851 K7ERS5 55 aa5.84□□□□□ -1.48
HDAC9-225ENST00000490851 HSPG2P98160 4391 aa5.83□□□□□ -1.48
HDAC9-225ENST00000490851 C20orf166-AS1Q96NR2 134 aa5.83□□□□□ -1.48
HDAC9-225ENST00000490851 IGLV7-46A0A075B6I9 117 aa5.83□□□□□ -1.48
HDAC9-225ENST00000490851 EPPK1P58107 5090 aaKnown RBP5.82□□□□□ -1.48
HDAC9-225ENST00000490851 FAM229AH3BQW9 127 aa5.82□□□□□ -1.48
HDAC9-225ENST00000490851 KIAA1109Q2LD37 5005 aa5.81□□□□□ -1.48
HDAC9-225ENST00000490851 Q5VSD8 79 aa5.8□□□□□ -1.48
HDAC9-225ENST00000490851 RYR1P21817 5038 aa5.79□□□□□ -1.48
HDAC9-225ENST00000490851 FLG2Q5D862 2391 aaPredicted RBP5.78□□□□□ -1.48
HDAC9-225ENST00000490851 MMP24-AS1A0A0U1RRL7 71 aa5.77□□□□□ -1.49
HDAC9-225ENST00000490851 A0A1B0GVX0 72 aa5.77□□□□□ -1.49
HDAC9-225ENST00000490851 LINC00304Q8N9R0 145 aa5.77□□□□□ -1.49
HDAC9-225ENST00000490851 KRTAP17-1Q9BYP8 105 aa5.76□□□□□ -1.49
HDAC9-225ENST00000490851 KRTAP29-1A8MX34 341 aaPredicted RBP5.75□□□□□ -1.49
HDAC9-225ENST00000490851 LRP1Q07954 4544 aaKnown RBP5.75□□□□□ -1.49
HDAC9-225ENST00000490851 SPINK1P00995 79 aa5.74□□□□□ -1.49
HDAC9-225ENST00000490851 UQCR11O14957 56 aa5.74□□□□□ -1.49
HDAC9-225ENST00000490851 PKHD1L1Q86WI1 4243 aa5.73□□□□□ -1.49
HDAC9-225ENST00000490851 NDUFAF8A1L188 74 aa5.72□□□□□ -1.49
HDAC9-225ENST00000490851 DMAC1Q96GE9 116 aa5.72□□□□□ -1.49
HDAC9-225ENST00000490851 MYCBP2O75592 4640 aa5.69□□□□□ -1.5
HDAC9-225ENST00000490851 MRPL34Q9BQ48 92 aaKnown RBP5.68□□□□□ -1.5
HDAC9-225ENST00000490851 A8MUU9 505 aa5.67□□□□□ -1.5
HDAC9-225ENST00000490851 Q8N1X5 172 aa5.67□□□□□ -1.5
HDAC9-225ENST00000490851 DMBT1Q9UGM3 2413 aaPredicted RBP5.66□□□□□ -1.5
HDAC9-225ENST00000490851 TNXBP22105 4242 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms