RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 NBDYA0A0U1RRE5 68 aa1.44□□□□□ -2.18
DEPDC1-204ENST00000489862 HIGD1CA8MV81 97 aa1.44□□□□□ -2.18
DEPDC1-204ENST00000489862 SPART-AS1P0CW21 52 aa1.44□□□□□ -2.18
DEPDC1-204ENST00000489862 TMEM263Q8WUH6 116 aaKnown RBP1.44□□□□□ -2.18
DEPDC1-204ENST00000489862 MYCBP2O75592 4640 aa1.43□□□□□ -2.18
DEPDC1-204ENST00000489862 A0A096LPF7 62 aa1.43□□□□□ -2.18
DEPDC1-204ENST00000489862 TRGV1A0A0A0MS02 117 aa1.43□□□□□ -2.18
DEPDC1-204ENST00000489862 IGKV3D-7A0A0C4DH55 119 aa1.43□□□□□ -2.18
DEPDC1-204ENST00000489862 IGKV3OR2-268A0A0C4DH90 116 aa1.43□□□□□ -2.18
DEPDC1-204ENST00000489862 IGHV3-30P01768 117 aa1.43□□□□□ -2.18
DEPDC1-204ENST00000489862 IGHV3-30-5P0DP03 117 aa1.43□□□□□ -2.18
DEPDC1-204ENST00000489862 HTN3P15516 51 aa1.43□□□□□ -2.18
DEPDC1-204ENST00000489862 KRTAP13-4Q3LI77 160 aa1.43□□□□□ -2.18
DEPDC1-204ENST00000489862 SFTA2Q6UW10 78 aa1.43□□□□□ -2.18
DEPDC1-204ENST00000489862 DMAC1Q96GE9 116 aa1.43□□□□□ -2.18
DEPDC1-204ENST00000489862 TIMM8BQ9Y5J9 83 aaPredicted RBP1.43□□□□□ -2.18
DEPDC1-204ENST00000489862 LENEPQ9Y5L5 61 aa1.43□□□□□ -2.18
DEPDC1-204ENST00000489862 FAT3Q8TDW7 4589 aa1.43□□□□□ -2.18
DEPDC1-204ENST00000489862 LRP1Q07954 4544 aaKnown RBP1.43□□□□□ -2.18
DEPDC1-204ENST00000489862 PKHD1L1Q86WI1 4243 aa1.42□□□□□ -2.18
DEPDC1-204ENST00000489862 SRRM2Q9UQ35 2752 aaKnown RBP1.42□□□□□ -2.18
DEPDC1-204ENST00000489862 TRAV21A0A0B4J279 112 aa1.42□□□□□ -2.18
DEPDC1-204ENST00000489862 A0A1B0GUT8 65 aa1.42□□□□□ -2.18
DEPDC1-204ENST00000489862 F2Z2F3 143 aa1.42□□□□□ -2.18
DEPDC1-204ENST00000489862 LY6G6CO95867 125 aa1.42□□□□□ -2.18
DEPDC1-204ENST00000489862 ARMS2P0C7Q2 107 aa1.42□□□□□ -2.18
DEPDC1-204ENST00000489862 KRTAP6-3Q3LI67 103 aa1.42□□□□□ -2.18
DEPDC1-204ENST00000489862 CFAP126Q5VTH2 177 aa1.42□□□□□ -2.18
DEPDC1-204ENST00000489862 C20orf197Q8N268 126 aa1.42□□□□□ -2.18
DEPDC1-204ENST00000489862 IGKV2-29A2NJV5 120 aaPredicted RBP1.41□□□□□ -2.18
DEPDC1-204ENST00000489862 H3BVH4 76 aa1.41□□□□□ -2.18
DEPDC1-204ENST00000489862 M0R2N4 97 aa1.41□□□□□ -2.18
DEPDC1-204ENST00000489862 SEC11AP67812 179 aa1.41□□□□□ -2.18
DEPDC1-204ENST00000489862 Q5VV11 94 aa1.41□□□□□ -2.18
DEPDC1-204ENST00000489862 BAGE3Q86Y29 109 aa1.41□□□□□ -2.18
DEPDC1-204ENST00000489862 C18orf32Q8TCD1 76 aa1.41□□□□□ -2.18
DEPDC1-204ENST00000489862 OBSCN-AS1Q96MR7 158 aa1.41□□□□□ -2.18
DEPDC1-204ENST00000489862 CNFNQ9BYD5 112 aa1.41□□□□□ -2.18
DEPDC1-204ENST00000489862 TRGV2A0A075B6R0 118 aa1.4□□□□□ -2.18
DEPDC1-204ENST00000489862 H3BNG1 76 aa1.4□□□□□ -2.18
DEPDC1-204ENST00000489862 ASIPP42127 132 aa1.4□□□□□ -2.18
DEPDC1-204ENST00000489862 ATP5EP56381 51 aaPredicted RBP1.4□□□□□ -2.18
DEPDC1-204ENST00000489862 WFDC2Q14508 124 aa1.4□□□□□ -2.18
DEPDC1-204ENST00000489862 WFDC10BQ8IUB3 73 aa1.4□□□□□ -2.18
DEPDC1-204ENST00000489862 DEFB104AQ8WTQ1 72 aa1.4□□□□□ -2.18
DEPDC1-204ENST00000489862 PRO0255Q9UI72 69 aa1.4□□□□□ -2.18
DEPDC1-204ENST00000489862 HMCN2Q8NDA2 5059 aa1.4□□□□□ -2.19
DEPDC1-204ENST00000489862 A0A087WTM6 91 aa1.4□□□□□ -2.19
DEPDC1-204ENST00000489862 D6R8Y8 96 aa1.4□□□□□ -2.19
DEPDC1-204ENST00000489862 M0QY20 66 aa1.4□□□□□ -2.19
DEPDC1-204ENST00000489862 RPL37AP61513 92 aaKnown RBP1.4□□□□□ -2.19
DEPDC1-204ENST00000489862 PCOTHQ58A44 107 aa1.4□□□□□ -2.19
DEPDC1-204ENST00000489862 LINC00208Q96KT6 92 aa1.4□□□□□ -2.19
DEPDC1-204ENST00000489862 TRAV22A0A0B4J277 110 aa1.39□□□□□ -2.19
DEPDC1-204ENST00000489862 LINC01546A6NGU7 62 aa1.39□□□□□ -2.19
DEPDC1-204ENST00000489862 K7EP34 96 aa1.39□□□□□ -2.19
DEPDC1-204ENST00000489862 INE1O15225 51 aa1.39□□□□□ -2.19
DEPDC1-204ENST00000489862 LEPROTL1O95214 131 aa1.39□□□□□ -2.19
DEPDC1-204ENST00000489862 PPP1R17O96001 155 aa1.39□□□□□ -2.19
DEPDC1-204ENST00000489862 C3orf79P0CE67 100 aa1.39□□□□□ -2.19
DEPDC1-204ENST00000489862 IFI27P40305 119 aaPredicted RBP1.39□□□□□ -2.19
DEPDC1-204ENST00000489862 KRTAP12-1P59990 96 aa1.39□□□□□ -2.19
DEPDC1-204ENST00000489862 KRTDAPP60985 99 aa1.39□□□□□ -2.19
DEPDC1-204ENST00000489862 UBE2D3P61077 147 aa1.39□□□□□ -2.19
DEPDC1-204ENST00000489862 UBE2D2P62837 147 aa1.39□□□□□ -2.19
DEPDC1-204ENST00000489862 RPL39LQ96EH5 51 aaKnown RBP1.39□□□□□ -2.19
DEPDC1-204ENST00000489862 NXT2Q9NPJ8 142 aaKnown RBP1.39□□□□□ -2.19
DEPDC1-204ENST00000489862 TNXBP22105 4242 aa1.38□□□□□ -2.19
DEPDC1-204ENST00000489862 TRBV7-3A0A075B6L6 115 aa1.38□□□□□ -2.19
DEPDC1-204ENST00000489862 TRBV7-7A0A0K0K1E9 115 aa1.38□□□□□ -2.19
DEPDC1-204ENST00000489862 SYS1-DBNDD2H3BUS1 97 aa1.38□□□□□ -2.19
DEPDC1-204ENST00000489862 K7EMI3 77 aa1.38□□□□□ -2.19
DEPDC1-204ENST00000489862 MGPP08493 103 aa1.38□□□□□ -2.19
DEPDC1-204ENST00000489862 PMCHL1Q16048 86 aa1.38□□□□□ -2.19
DEPDC1-204ENST00000489862 FAM74A4Q5TZK3 123 aa1.38□□□□□ -2.19
DEPDC1-204ENST00000489862 ENHOQ6UWT2 76 aa1.38□□□□□ -2.19
DEPDC1-204ENST00000489862 LOC110117498A0A087WWA1 95 aa1.37□□□□□ -2.19
DEPDC1-204ENST00000489862 LINC01549A6NIU2 74 aa1.37□□□□□ -2.19
DEPDC1-204ENST00000489862 FCER1GP30273 86 aa1.37□□□□□ -2.19
DEPDC1-204ENST00000489862 POLR2KP53803 58 aaKnown RBP1.37□□□□□ -2.19
DEPDC1-204ENST00000489862 CCL18P55774 89 aa1.37□□□□□ -2.19
DEPDC1-204ENST00000489862 LINC01556Q5JQF7 62 aa1.37□□□□□ -2.19
DEPDC1-204ENST00000489862 LELP1Q5T871 98 aa1.37□□□□□ -2.19
DEPDC1-204ENST00000489862 SMIM2Q9BVW6 85 aa1.37□□□□□ -2.19
DEPDC1-204ENST00000489862 CYP4F30PQ9H0H9 118 aa1.37□□□□□ -2.19
DEPDC1-204ENST00000489862 ST20Q9HBF5 79 aa1.37□□□□□ -2.19
DEPDC1-204ENST00000489862 HIGD1BQ9P298 99 aa1.37□□□□□ -2.19
DEPDC1-204ENST00000489862 UBR4Q5T4S7 5183 aa1.37□□□□□ -2.19
DEPDC1-204ENST00000489862 CHKB-CPT1BH3BT56 60 aa1.37□□□□□ -2.19
DEPDC1-204ENST00000489862 H7BZZ5 65 aa1.37□□□□□ -2.19
DEPDC1-204ENST00000489862 ZNF56Q15929 161 aa1.37□□□□□ -2.19
DEPDC1-204ENST00000489862 SPATA45Q537H7 98 aa1.37□□□□□ -2.19
DEPDC1-204ENST00000489862 UBE2DNLQ8IWF7 75 aa1.37□□□□□ -2.19
DEPDC1-204ENST00000489862 I3L3M4 83 aa1.36□□□□□ -2.19
DEPDC1-204ENST00000489862 IGLC3P0DOY3 106 aa1.36□□□□□ -2.19
DEPDC1-204ENST00000489862 ELOF1P60002 83 aaKnown RBP1.36□□□□□ -2.19
DEPDC1-204ENST00000489862 HAMPP81172 84 aa1.36□□□□□ -2.19
DEPDC1-204ENST00000489862 SERP2Q8N6R1 65 aa1.36□□□□□ -2.19
DEPDC1-204ENST00000489862 COX7B2Q8TF08 81 aa1.36□□□□□ -2.19
DEPDC1-204ENST00000489862 UQCR10Q9UDW1 63 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms