RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 PKHD1L1Q86WI1 4243 aa6.07□□□□□ -1.44
NOD1-208ENST00000489614 KMT2CQ8NEZ4 4911 aaKnown RBP6.07□□□□□ -1.44
NOD1-208ENST00000489614 RPL37AP8A6NKH3 93 aa6.07□□□□□ -1.44
NOD1-208ENST00000489614 PLAC8Q9NZF1 115 aa6.07□□□□□ -1.44
NOD1-208ENST00000489614 C14orf177Q52M58 125 aa6.06□□□□□ -1.44
NOD1-208ENST00000489614 A0A087WSZ3 146 aa6.05□□□□□ -1.44
NOD1-208ENST00000489614 A0A087WTM6 91 aa6.05□□□□□ -1.44
NOD1-208ENST00000489614 SPRR4Q96PI1 79 aa6.05□□□□□ -1.44
NOD1-208ENST00000489614 RTL8CO15255 209 aa6.04□□□□□ -1.44
NOD1-208ENST00000489614 C1orf134Q5TEV5 83 aa6.04□□□□□ -1.44
NOD1-208ENST00000489614 PKHD1P08F94 4074 aa6.04□□□□□ -1.44
NOD1-208ENST00000489614 A0A1B0GW54 56 aa6.03□□□□□ -1.44
NOD1-208ENST00000489614 HRES1P13985 223 aa6.03□□□□□ -1.44
NOD1-208ENST00000489614 KRTAP29-1A8MX34 341 aaPredicted RBP6.02□□□□□ -1.44
NOD1-208ENST00000489614 H3BPC8 53 aa6.02□□□□□ -1.44
NOD1-208ENST00000489614 TNP2Q05952 138 aa6.02□□□□□ -1.45
NOD1-208ENST00000489614 SRRM2Q9UQ35 2752 aaKnown RBP6.01□□□□□ -1.45
NOD1-208ENST00000489614 RYR3Q15413 4870 aa6.01□□□□□ -1.45
NOD1-208ENST00000489614 APOBP04114 4563 aaKnown RBP6□□□□□ -1.45
NOD1-208ENST00000489614 A0A096LNI7 61 aa6□□□□□ -1.45
NOD1-208ENST00000489614 KRTAP4-16G5E9R7 235 aaPredicted RBP6□□□□□ -1.45
NOD1-208ENST00000489614 LRP1BQ9NZR2 4599 aa5.99□□□□□ -1.45
NOD1-208ENST00000489614 SPRR1AP35321 89 aa5.99□□□□□ -1.45
NOD1-208ENST00000489614 FAM168BA1KXE4 195 aa5.98□□□□□ -1.45
NOD1-208ENST00000489614 H0Y9J4 135 aa5.98□□□□□ -1.45
NOD1-208ENST00000489614 SPACA4Q8TDM5 124 aa5.98□□□□□ -1.45
NOD1-208ENST00000489614 Q6ZRX8 168 aa5.97□□□□□ -1.45
NOD1-208ENST00000489614 DHRS4-AS1Q9P1J3 65 aa5.97□□□□□ -1.45
NOD1-208ENST00000489614 PANO1I0J062 215 aa5.97□□□□□ -1.45
NOD1-208ENST00000489614 IGFL1Q6UW32 110 aa5.97□□□□□ -1.45
NOD1-208ENST00000489614 A0A1B0GVY2 172 aa5.95□□□□□ -1.46
NOD1-208ENST00000489614 Q6ZSA8 131 aa5.95□□□□□ -1.46
NOD1-208ENST00000489614 KRTAP11-1Q8IUC1 163 aa5.93□□□□□ -1.46
NOD1-208ENST00000489614 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.93□□□□□ -1.46
NOD1-208ENST00000489614 KRTAP10-2P60368 255 aa5.93□□□□□ -1.46
NOD1-208ENST00000489614 VPS13BQ7Z7G8 4022 aa5.92□□□□□ -1.46
NOD1-208ENST00000489614 CHTF8P0CG12 524 aa5.92□□□□□ -1.46
NOD1-208ENST00000489614 FLG2Q5D862 2391 aaPredicted RBP5.9□□□□□ -1.46
NOD1-208ENST00000489614 IGKV2-24A0A0C4DH68 120 aa5.9□□□□□ -1.46
NOD1-208ENST00000489614 A8MWP4 228 aa5.9□□□□□ -1.46
NOD1-208ENST00000489614 KRTAP13-1Q8IUC0 172 aa5.9□□□□□ -1.46
NOD1-208ENST00000489614 A0A1B0GU69 56 aa5.9□□□□□ -1.47
NOD1-208ENST00000489614 ROMO1P60602 79 aa5.9□□□□□ -1.47
NOD1-208ENST00000489614 MIR22HGQ0VDD5 57 aa5.9□□□□□ -1.47
NOD1-208ENST00000489614 KRTAP3-3Q9BYR6 98 aa5.9□□□□□ -1.47
NOD1-208ENST00000489614 KRTAP3-2Q9BYR7 98 aa5.9□□□□□ -1.47
NOD1-208ENST00000489614 ASB16-AS1Q495Z4 193 aa5.89□□□□□ -1.47
NOD1-208ENST00000489614 REG3GQ6UW15 175 aa5.88□□□□□ -1.47
NOD1-208ENST00000489614 LCE2DQ5TA82 110 aaPredicted RBP5.88□□□□□ -1.47
NOD1-208ENST00000489614 IGLV5-52A0A0A0MRZ9 124 aa5.88□□□□□ -1.47
NOD1-208ENST00000489614 IGLV8-61A0A075B6I0 122 aa5.87□□□□□ -1.47
NOD1-208ENST00000489614 MMP24-AS1A0A0U1RRL7 71 aa5.87□□□□□ -1.47
NOD1-208ENST00000489614 SPATA8Q6RVD6 105 aa5.87□□□□□ -1.47
NOD1-208ENST00000489614 IGHV6-1A0A0B4J1U7 121 aa5.86□□□□□ -1.47
NOD1-208ENST00000489614 KRTAP10-1P60331 282 aa5.86□□□□□ -1.47
NOD1-208ENST00000489614 PRLHP81277 87 aa5.85□□□□□ -1.47
NOD1-208ENST00000489614 HSPG2P98160 4391 aa5.84□□□□□ -1.47
NOD1-208ENST00000489614 A0A0A0MQY5 61 aa5.84□□□□□ -1.47
NOD1-208ENST00000489614 UQCR11O14957 56 aa5.83□□□□□ -1.48
NOD1-208ENST00000489614 LINC00472Q9H8W2 130 aa5.83□□□□□ -1.48
NOD1-208ENST00000489614 ZNF861PO60384 105 aa5.81□□□□□ -1.48
NOD1-208ENST00000489614 CIRBP-AS1Q8TBR5 109 aa5.79□□□□□ -1.48
NOD1-208ENST00000489614 TP53AIP1Q9HCN2 124 aa5.79□□□□□ -1.48
NOD1-208ENST00000489614 CRIPTQ9P021 101 aa5.79□□□□□ -1.48
NOD1-208ENST00000489614 SPRR1BP22528 89 aa5.79□□□□□ -1.48
NOD1-208ENST00000489614 P0C880 135 aa5.78□□□□□ -1.48
NOD1-208ENST00000489614 ACYP2P14621 99 aa5.78□□□□□ -1.48
NOD1-208ENST00000489614 FAM229AH3BQW9 127 aa5.78□□□□□ -1.48
NOD1-208ENST00000489614 A0A087X002 238 aa5.77□□□□□ -1.49
NOD1-208ENST00000489614 RYR1P21817 5038 aa5.77□□□□□ -1.49
NOD1-208ENST00000489614 PSORS1C2Q9UIG4 136 aa5.77□□□□□ -1.49
NOD1-208ENST00000489614 KRTAP10-4P60372 401 aaPredicted RBP5.76□□□□□ -1.49
NOD1-208ENST00000489614 LINC00483Q53H64 154 aa5.76□□□□□ -1.49
NOD1-208ENST00000489614 KRTAP25-1Q3LHN0 102 aa5.75□□□□□ -1.49
NOD1-208ENST00000489614 EPPK1P58107 5090 aaKnown RBP5.75□□□□□ -1.49
NOD1-208ENST00000489614 C8orf17Q9NRJ1 99 aa5.74□□□□□ -1.49
NOD1-208ENST00000489614 FAT1Q14517 4588 aa5.73□□□□□ -1.49
NOD1-208ENST00000489614 NOTCH2NLQ7Z3S9 236 aa5.72□□□□□ -1.49
NOD1-208ENST00000489614 FAT3Q8TDW7 4589 aa5.72□□□□□ -1.49
NOD1-208ENST00000489614 IGLV7-43P04211 117 aa5.71□□□□□ -1.5
NOD1-208ENST00000489614 Q5W150 140 aa5.71□□□□□ -1.5
NOD1-208ENST00000489614 TNXBP22105 4242 aa5.71□□□□□ -1.5
NOD1-208ENST00000489614 A8MUU9 505 aa5.7□□□□□ -1.5
NOD1-208ENST00000489614 MRPL34Q9BQ48 92 aaKnown RBP5.69□□□□□ -1.5
NOD1-208ENST00000489614 SMR3BP02814 79 aaPredicted RBP5.68□□□□□ -1.5
NOD1-208ENST00000489614 DMAC1Q96GE9 116 aa5.68□□□□□ -1.5
NOD1-208ENST00000489614 CDK2AP2O75956 126 aa5.67□□□□□ -1.5
NOD1-208ENST00000489614 IGLV9-49A0A0B4J1Y8 123 aa5.66□□□□□ -1.5
NOD1-208ENST00000489614 KRTAP17-1Q9BYP8 105 aa5.66□□□□□ -1.5
NOD1-208ENST00000489614 NDUFAF8A1L188 74 aa5.65□□□□□ -1.51
NOD1-208ENST00000489614 KRTAP1-4P0C5Y4 121 aa5.65□□□□□ -1.51
NOD1-208ENST00000489614 A0A1B0GVX0 72 aa5.64□□□□□ -1.51
NOD1-208ENST00000489614 Q96NJ1 140 aa5.64□□□□□ -1.51
NOD1-208ENST00000489614 LINC00304Q8N9R0 145 aa5.63□□□□□ -1.51
NOD1-208ENST00000489614 SPINK1P00995 79 aa5.63□□□□□ -1.51
NOD1-208ENST00000489614 SSBP3-AS1Q7Z2R9 100 aa5.63□□□□□ -1.51
NOD1-208ENST00000489614 SPINK6Q6UWN8 80 aa5.62□□□□□ -1.51
NOD1-208ENST00000489614 SPINT4Q6UDR6 99 aa5.61□□□□□ -1.51
NOD1-208ENST00000489614 KRTAP13-2Q52LG2 175 aa5.58□□□□□ -1.52
NOD1-208ENST00000489614 KRTAP16-1A8MUX0 517 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms