RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 Q6ZQY7 126 aa4.75□□□□□ -1.65
TRAPPC12-221ENST00000489032 MUC2Q02817 5179 aa4.75□□□□□ -1.65
TRAPPC12-221ENST00000489032 KRTAP1-4P0C5Y4 121 aa4.74□□□□□ -1.65
TRAPPC12-221ENST00000489032 FAM229BQ4G0N7 80 aa4.74□□□□□ -1.65
TRAPPC12-221ENST00000489032 PDE6GP18545 87 aa4.73□□□□□ -1.65
TRAPPC12-221ENST00000489032 KRTAP10-8P60410 259 aa4.73□□□□□ -1.65
TRAPPC12-221ENST00000489032 SPRR4Q96PI1 79 aa4.73□□□□□ -1.65
TRAPPC12-221ENST00000489032 Q9BRP9 147 aa4.73□□□□□ -1.65
TRAPPC12-221ENST00000489032 LAMTOR3Q9UHA4 124 aa4.73□□□□□ -1.65
TRAPPC12-221ENST00000489032 RBM3P98179 157 aaKnown RBP4.72□□□□□ -1.65
TRAPPC12-221ENST00000489032 C14orf132Q9NPU4 83 aa4.72□□□□□ -1.65
TRAPPC12-221ENST00000489032 ERC2-IT1O76042 136 aa4.71□□□□□ -1.66
TRAPPC12-221ENST00000489032 CCKP06307 115 aa4.71□□□□□ -1.66
TRAPPC12-221ENST00000489032 DSCR8Q96T75 97 aa4.71□□□□□ -1.66
TRAPPC12-221ENST00000489032 ANAPC11Q9NYG5 84 aa4.71□□□□□ -1.66
TRAPPC12-221ENST00000489032 CRCT1Q9UGL9 99 aa4.71□□□□□ -1.66
TRAPPC12-221ENST00000489032 LOC110117498A0A087WWA1 95 aa4.7□□□□□ -1.66
TRAPPC12-221ENST00000489032 SCGB1A1P11684 91 aa4.7□□□□□ -1.66
TRAPPC12-221ENST00000489032 KRTAP10-5P60370 271 aa4.69□□□□□ -1.66
TRAPPC12-221ENST00000489032 LINC00483Q53H64 154 aa4.69□□□□□ -1.66
TRAPPC12-221ENST00000489032 LINC00643Q86TS7 51 aa4.69□□□□□ -1.66
TRAPPC12-221ENST00000489032 LPAP08519 4548 aa4.68□□□□□ -1.66
TRAPPC12-221ENST00000489032 ST20-AS1Q8NBB2 130 aa4.68□□□□□ -1.66
TRAPPC12-221ENST00000489032 DEFB105AQ8NG35 78 aa4.68□□□□□ -1.66
TRAPPC12-221ENST00000489032 IGLV8-61A0A075B6I0 122 aa4.67□□□□□ -1.66
TRAPPC12-221ENST00000489032 A0A1B0GV72 72 aa4.67□□□□□ -1.66
TRAPPC12-221ENST00000489032 KRTAP13-2Q52LG2 175 aa4.67□□□□□ -1.66
TRAPPC12-221ENST00000489032 IGLV5-48A0A075B6I7 105 aa4.66□□□□□ -1.66
TRAPPC12-221ENST00000489032 MT-ATP8P03928 68 aa4.66□□□□□ -1.66
TRAPPC12-221ENST00000489032 SPRR1BP22528 89 aa4.66□□□□□ -1.66
TRAPPC12-221ENST00000489032 LCE3CQ5T5A8 94 aa4.66□□□□□ -1.66
TRAPPC12-221ENST00000489032 C9orf153Q5TBE3 101 aa4.66□□□□□ -1.66
TRAPPC12-221ENST00000489032 Q6ZQT0 140 aa4.66□□□□□ -1.66
TRAPPC12-221ENST00000489032 C3orf22Q8N5N4 141 aa4.66□□□□□ -1.66
TRAPPC12-221ENST00000489032 LINC00304Q8N9R0 145 aa4.66□□□□□ -1.66
TRAPPC12-221ENST00000489032 IMUPQ9GZP8 106 aa4.66□□□□□ -1.66
TRAPPC12-221ENST00000489032 TRBV7-4A0A0J9YYF1 115 aa4.65□□□□□ -1.67
TRAPPC12-221ENST00000489032 F8WEM9 126 aa4.65□□□□□ -1.67
TRAPPC12-221ENST00000489032 MOBPQ13875 183 aa4.65□□□□□ -1.67
TRAPPC12-221ENST00000489032 SPAG11AQ6PDA7 123 aa4.65□□□□□ -1.67
TRAPPC12-221ENST00000489032 Q6Q795 121 aa4.65□□□□□ -1.67
TRAPPC12-221ENST00000489032 SSBP3-AS1Q7Z2R9 100 aa4.65□□□□□ -1.67
TRAPPC12-221ENST00000489032 UBL5Q9BZL1 73 aa4.65□□□□□ -1.67
TRAPPC12-221ENST00000489032 A0A1B0GW54 56 aa4.64□□□□□ -1.67
TRAPPC12-221ENST00000489032 ATP5EP2Q5VTU8 51 aa4.64□□□□□ -1.67
TRAPPC12-221ENST00000489032 LINC00846Q9NV44 126 aa4.64□□□□□ -1.67
TRAPPC12-221ENST00000489032 TRBV7-7A0A0K0K1E9 115 aa4.63□□□□□ -1.67
TRAPPC12-221ENST00000489032 Q6JHZ5 121 aa4.63□□□□□ -1.67
TRAPPC12-221ENST00000489032 FSIP2Q5CZC0 6907 aa4.63□□□□□ -1.67
TRAPPC12-221ENST00000489032 SPINK1P00995 79 aa4.61□□□□□ -1.67
TRAPPC12-221ENST00000489032 A8MU10 97 aa4.6□□□□□ -1.67
TRAPPC12-221ENST00000489032 PRR4Q16378 134 aa4.59□□□□□ -1.67
TRAPPC12-221ENST00000489032 IGKV3D-7A0A0C4DH55 119 aa4.57□□□□□ -1.68
TRAPPC12-221ENST00000489032 RPS29P62273 56 aaKnown RBP4.57□□□□□ -1.68
TRAPPC12-221ENST00000489032 NREPQ16612 68 aa4.57□□□□□ -1.68
TRAPPC12-221ENST00000489032 CD164Q04900 197 aa4.56□□□□□ -1.68
TRAPPC12-221ENST00000489032 HRCT1Q6UXD1 115 aa4.56□□□□□ -1.68
TRAPPC12-221ENST00000489032 LIMD2Q9BT23 127 aa4.56□□□□□ -1.68
TRAPPC12-221ENST00000489032 ANAPC13Q9BS18 74 aa4.55□□□□□ -1.68
TRAPPC12-221ENST00000489032 A0A1W2PNM2 257 aa4.54□□□□□ -1.68
TRAPPC12-221ENST00000489032 HIST1H4AP62805 103 aaKnown RBP4.54□□□□□ -1.68
TRAPPC12-221ENST00000489032 RETNLBQ9BQ08 111 aa4.54□□□□□ -1.68
TRAPPC12-221ENST00000489032 FAM236AA0A1B0GUQ0 79 aa4.53□□□□□ -1.68
TRAPPC12-221ENST00000489032 FAM236BA0A1B0GV22 79 aa4.53□□□□□ -1.68
TRAPPC12-221ENST00000489032 KRTAP5-11Q6L8G4 156 aa4.53□□□□□ -1.68
TRAPPC12-221ENST00000489032 IGFL1Q6UW32 110 aa4.53□□□□□ -1.68
TRAPPC12-221ENST00000489032 FP248Q71RG6 208 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC12-221ENST00000489032 ATOX1O00244 68 aa4.52□□□□□ -1.69
TRAPPC12-221ENST00000489032 BPY2O14599 106 aa4.52□□□□□ -1.69
TRAPPC12-221ENST00000489032 A0A0G2JQZ4 141 aa4.5□□□□□ -1.69
TRAPPC12-221ENST00000489032 Q5XG85 94 aa4.49□□□□□ -1.69
TRAPPC12-221ENST00000489032 A0A087WVE0 104 aa4.48□□□□□ -1.69
TRAPPC12-221ENST00000489032 SMIM20Q8N5G0 67 aa4.48□□□□□ -1.69
TRAPPC12-221ENST00000489032 SS18L2Q9UHA2 77 aa4.48□□□□□ -1.69
TRAPPC12-221ENST00000489032 A0A087WSZ3 146 aa4.47□□□□□ -1.69
TRAPPC12-221ENST00000489032 J3KT08 172 aa4.46□□□□□ -1.7
TRAPPC12-221ENST00000489032 TPRXLQ17RH7 258 aa4.46□□□□□ -1.7
TRAPPC12-221ENST00000489032 ASB16-AS1Q495Z4 193 aa4.45□□□□□ -1.7
TRAPPC12-221ENST00000489032 UQCRQO14949 82 aa4.44□□□□□ -1.7
TRAPPC12-221ENST00000489032 IGKV4-1P06312 121 aa4.44□□□□□ -1.7
TRAPPC12-221ENST00000489032 C1orf195Q5TG92 126 aa4.44□□□□□ -1.7
TRAPPC12-221ENST00000489032 SERP2Q8N6R1 65 aa4.44□□□□□ -1.7
TRAPPC12-221ENST00000489032 COX7CP15954 63 aa4.43□□□□□ -1.7
TRAPPC12-221ENST00000489032 TRAV7A0A075B6U4 112 aa4.42□□□□□ -1.7
TRAPPC12-221ENST00000489032 NDUFB1O75438 58 aa4.42□□□□□ -1.7
TRAPPC12-221ENST00000489032 KRTAP13-3Q3SY46 172 aa4.42□□□□□ -1.7
TRAPPC12-221ENST00000489032 Q8N9L7 120 aa4.41□□□□□ -1.7
TRAPPC12-221ENST00000489032 LINC00472Q9H8W2 130 aa4.41□□□□□ -1.7
TRAPPC12-221ENST00000489032 A8MWP4 228 aa4.4□□□□□ -1.71
TRAPPC12-221ENST00000489032 HCG22E2RYF7 251 aa4.39□□□□□ -1.71
TRAPPC12-221ENST00000489032 CCDC179H3BU77 68 aa4.39□□□□□ -1.71
TRAPPC12-221ENST00000489032 K7EQZ3 153 aa4.39□□□□□ -1.71
TRAPPC12-221ENST00000489032 C9orf92A6NGG3 77 aa4.38□□□□□ -1.71
TRAPPC12-221ENST00000489032 DEFB116Q30KQ4 102 aa4.38□□□□□ -1.71
TRAPPC12-221ENST00000489032 PRR15Q8IV56 129 aa4.38□□□□□ -1.71
TRAPPC12-221ENST00000489032 CASC2Q6XLA1 102 aa4.35□□□□□ -1.71
TRAPPC12-221ENST00000489032 Q96NJ1 140 aa4.34□□□□□ -1.71
TRAPPC12-221ENST00000489032 A0A1B0GVX0 72 aa4.33□□□□□ -1.72
TRAPPC12-221ENST00000489032 KRTAP9-6A8MVA2 160 aa4.33□□□□□ -1.72
TRAPPC12-221ENST00000489032 WFDC13Q8IUB5 93 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms