RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 LCE2CQ5TA81 110 aa7.6□□□□□ -1.19
COL9A2-208ENST00000488463 J3QR89 54 aa7.59□□□□□ -1.19
COL9A2-208ENST00000488463 Q96NJ1 140 aa7.58□□□□□ -1.2
COL9A2-208ENST00000488463 A0A087WSZ3 146 aa7.56□□□□□ -1.2
COL9A2-208ENST00000488463 ACYP1P07311 99 aa7.54□□□□□ -1.2
COL9A2-208ENST00000488463 NREPQ16612 68 aa7.53□□□□□ -1.2
COL9A2-208ENST00000488463 FLGP20930 4061 aaPredicted RBP7.51□□□□□ -1.21
COL9A2-208ENST00000488463 UBL5Q9BZL1 73 aa7.51□□□□□ -1.21
COL9A2-208ENST00000488463 Q75L30 129 aa7.5□□□□□ -1.21
COL9A2-208ENST00000488463 LCE2DQ5TA82 110 aaPredicted RBP7.48□□□□□ -1.21
COL9A2-208ENST00000488463 FAM240AA0A1B0GVK7 77 aa7.47□□□□□ -1.21
COL9A2-208ENST00000488463 J3KT08 172 aa7.47□□□□□ -1.21
COL9A2-208ENST00000488463 K7ERU9 68 aa7.47□□□□□ -1.21
COL9A2-208ENST00000488463 C20orf166-AS1Q96NR2 134 aa7.46□□□□□ -1.22
COL9A2-208ENST00000488463 LINC00472Q9H8W2 130 aa7.46□□□□□ -1.22
COL9A2-208ENST00000488463 A8MUU9 505 aa7.45□□□□□ -1.22
COL9A2-208ENST00000488463 MT1HP80294 61 aa7.44□□□□□ -1.22
COL9A2-208ENST00000488463 NDUFB1O75438 58 aa7.43□□□□□ -1.22
COL9A2-208ENST00000488463 IGKV4-1P06312 121 aa7.43□□□□□ -1.22
COL9A2-208ENST00000488463 LINC00846Q9NV44 126 aa7.43□□□□□ -1.22
COL9A2-208ENST00000488463 DSCR10P59022 87 aa7.42□□□□□ -1.22
COL9A2-208ENST00000488463 Q6ZVQ6 151 aa7.42□□□□□ -1.22
COL9A2-208ENST00000488463 KRTAP16-1A8MUX0 517 aa7.41□□□□□ -1.22
COL9A2-208ENST00000488463 BPY2O14599 106 aa7.41□□□□□ -1.22
COL9A2-208ENST00000488463 SIGMAR1Q99720 223 aa7.41□□□□□ -1.22
COL9A2-208ENST00000488463 DEFB116Q30KQ4 102 aa7.4□□□□□ -1.22
COL9A2-208ENST00000488463 NOTCH2NLQ7Z3S9 236 aa7.4□□□□□ -1.22
COL9A2-208ENST00000488463 ATP11AUNQ6ZP68 121 aa7.39□□□□□ -1.23
COL9A2-208ENST00000488463 CRCT1Q9UGL9 99 aa7.37□□□□□ -1.23
COL9A2-208ENST00000488463 LINC00313P59037 77 aa7.36□□□□□ -1.23
COL9A2-208ENST00000488463 ATP5EP2Q5VTU8 51 aa7.35□□□□□ -1.23
COL9A2-208ENST00000488463 LINC00643Q86TS7 51 aa7.35□□□□□ -1.23
COL9A2-208ENST00000488463 FSIP2Q5CZC0 6907 aa7.34□□□□□ -1.23
COL9A2-208ENST00000488463 CXCL6P80162 114 aa7.34□□□□□ -1.23
COL9A2-208ENST00000488463 A8MWP4 228 aa7.33□□□□□ -1.24
COL9A2-208ENST00000488463 IGHV6-1A0A0B4J1U7 121 aa7.31□□□□□ -1.24
COL9A2-208ENST00000488463 A0A1B0GVX0 72 aa7.31□□□□□ -1.24
COL9A2-208ENST00000488463 C8orf87E5RJ46 101 aa7.31□□□□□ -1.24
COL9A2-208ENST00000488463 LORP23490 312 aaPredicted RBP7.3□□□□□ -1.24
COL9A2-208ENST00000488463 KRTAP10-6P60371 365 aaPredicted RBP7.28□□□□□ -1.24
COL9A2-208ENST00000488463 PRR15Q8IV56 129 aa7.28□□□□□ -1.24
COL9A2-208ENST00000488463 IGKV3D-7A0A0C4DH55 119 aa7.27□□□□□ -1.25
COL9A2-208ENST00000488463 COX6B2Q6YFQ2 88 aa7.27□□□□□ -1.25
COL9A2-208ENST00000488463 HIST1H4AP62805 103 aaKnown RBP7.25□□□□□ -1.25
COL9A2-208ENST00000488463 K7EQZ3 153 aa7.23□□□□□ -1.25
COL9A2-208ENST00000488463 C8orf17Q9NRJ1 99 aa7.22□□□□□ -1.25
COL9A2-208ENST00000488463 Q8N9L7 120 aa7.21□□□□□ -1.26
COL9A2-208ENST00000488463 MPLKIPQ8TAP9 179 aa7.21□□□□□ -1.26
COL9A2-208ENST00000488463 hDV103S1A0JD37 113 aa7.19□□□□□ -1.26
COL9A2-208ENST00000488463 HCG22E2RYF7 251 aa7.19□□□□□ -1.26
COL9A2-208ENST00000488463 M0R2T5 61 aa7.19□□□□□ -1.26
COL9A2-208ENST00000488463 HRES1P13985 223 aa7.19□□□□□ -1.26
COL9A2-208ENST00000488463 CASC2Q6XLA1 102 aa7.19□□□□□ -1.26
COL9A2-208ENST00000488463 Q8N9P0 234 aaPredicted RBP7.19□□□□□ -1.26
COL9A2-208ENST00000488463 IMUPQ9GZP8 106 aa7.18□□□□□ -1.26
COL9A2-208ENST00000488463 TMEM254Q8TBM7 123 aa7.17□□□□□ -1.26
COL9A2-208ENST00000488463 WFDC13Q8IUB5 93 aa7.16□□□□□ -1.26
COL9A2-208ENST00000488463 MMP24-AS1A0A0U1RRL7 71 aa7.15□□□□□ -1.26
COL9A2-208ENST00000488463 ZCCHC13Q8WW36 166 aaKnown RBP7.15□□□□□ -1.26
COL9A2-208ENST00000488463 MRPL34Q9BQ48 92 aaKnown RBP7.15□□□□□ -1.26
COL9A2-208ENST00000488463 NDUFS5O43920 106 aa7.14□□□□□ -1.27
COL9A2-208ENST00000488463 MT-ATP8P03928 68 aa7.12□□□□□ -1.27
COL9A2-208ENST00000488463 SCGB1A1P11684 91 aa7.11□□□□□ -1.27
COL9A2-208ENST00000488463 KRTAP9-8Q9BYQ0 159 aa7.09□□□□□ -1.27
COL9A2-208ENST00000488463 A0A087WVE0 104 aa7.08□□□□□ -1.28
COL9A2-208ENST00000488463 TP53AIP1Q9HCN2 124 aa7.08□□□□□ -1.28
COL9A2-208ENST00000488463 SPINK7P58062 85 aa7.07□□□□□ -1.28
COL9A2-208ENST00000488463 RBM12B-AS1Q9P1G2 102 aa7.05□□□□□ -1.28
COL9A2-208ENST00000488463 FAM236DA0A1B0GTK5 79 aa7.03□□□□□ -1.28
COL9A2-208ENST00000488463 FAM236CP0DP71 79 aa7.03□□□□□ -1.28
COL9A2-208ENST00000488463 SMIM20Q8N5G0 67 aa7.02□□□□□ -1.29
COL9A2-208ENST00000488463 FAM236AA0A1B0GUQ0 79 aa6.99□□□□□ -1.29
COL9A2-208ENST00000488463 FAM236BA0A1B0GV22 79 aa6.99□□□□□ -1.29
COL9A2-208ENST00000488463 UQCRQO14949 82 aa6.99□□□□□ -1.29
COL9A2-208ENST00000488463 ATOX1O00244 68 aa6.97□□□□□ -1.29
COL9A2-208ENST00000488463 MT2AP02795 61 aa6.97□□□□□ -1.29
COL9A2-208ENST00000488463 Q5W150 140 aa6.96□□□□□ -1.3
COL9A2-208ENST00000488463 USH2AO75445 5202 aa6.96□□□□□ -1.3
COL9A2-208ENST00000488463 MP68P56378 58 aa6.94□□□□□ -1.3
COL9A2-208ENST00000488463 C5orf47Q569G3 176 aa6.93□□□□□ -1.3
COL9A2-208ENST00000488463 TRAV22A0A0B4J277 110 aa6.92□□□□□ -1.3
COL9A2-208ENST00000488463 MT1FP04733 61 aa6.92□□□□□ -1.3
COL9A2-208ENST00000488463 SSPOA2VEC9 5147 aa6.92□□□□□ -1.3
COL9A2-208ENST00000488463 TRAV7A0A075B6U4 112 aa6.91□□□□□ -1.3
COL9A2-208ENST00000488463 OCR1Q9BZK8 76 aa6.91□□□□□ -1.3
COL9A2-208ENST00000488463 H0Y9P7 68 aa6.89□□□□□ -1.31
COL9A2-208ENST00000488463 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.88□□□□□ -1.31
COL9A2-208ENST00000488463 H3BPC8 53 aa6.87□□□□□ -1.31
COL9A2-208ENST00000488463 C7orf65Q6ZTY9 151 aa6.87□□□□□ -1.31
COL9A2-208ENST00000488463 IGKV2D-30A0A075B6S6 120 aa6.86□□□□□ -1.31
COL9A2-208ENST00000488463 LOC101927531A0A1B0GV80 90 aa6.86□□□□□ -1.31
COL9A2-208ENST00000488463 IGKV2-30P06310 120 aa6.86□□□□□ -1.31
COL9A2-208ENST00000488463 KRTAP9-3Q9BYQ3 159 aa6.86□□□□□ -1.31
COL9A2-208ENST00000488463 KRTAP9-7A8MTY7 169 aa6.85□□□□□ -1.31
COL9A2-208ENST00000488463 SERP2Q8N6R1 65 aa6.85□□□□□ -1.31
COL9A2-208ENST00000488463 C1orf64Q8NEQ6 169 aa6.84□□□□□ -1.31
COL9A2-208ENST00000488463 LINC00208Q96KT6 92 aa6.83□□□□□ -1.32
COL9A2-208ENST00000488463 H1FX-AS1Q4G0G2 97 aa6.82□□□□□ -1.32
COL9A2-208ENST00000488463 LCE2BO14633 110 aa6.81□□□□□ -1.32
COL9A2-208ENST00000488463 KRTAP10-10P60014 251 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms