RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 A0A096LPF7 62 aa0.91□□□□□ -2.26
RBM28-207ENST00000488249 SPINK1P00995 79 aa0.91□□□□□ -2.26
RBM28-207ENST00000488249 NCOR1O75376 2440 aa0.91□□□□□ -2.26
RBM28-207ENST00000488249 A0A0C4DFX4 3053 aa0.91□□□□□ -2.26
RBM28-207ENST00000488249 SRCAPQ6ZRS2 3230 aa0.9□□□□□ -2.27
RBM28-207ENST00000488249 DEFB136Q30KP8 78 aa0.9□□□□□ -2.27
RBM28-207ENST00000488249 APC2O95996 2303 aa0.9□□□□□ -2.27
RBM28-207ENST00000488249 WNK1Q9H4A3 2382 aa0.9□□□□□ -2.27
RBM28-207ENST00000488249 COL6A3P12111 3177 aa0.89□□□□□ -2.27
RBM28-207ENST00000488249 DEFB124Q8NES8 71 aa0.89□□□□□ -2.27
RBM28-207ENST00000488249 MYO9AB2RTY4 2548 aa0.89□□□□□ -2.27
RBM28-207ENST00000488249 CEP250Q9BV73 2442 aa0.89□□□□□ -2.27
RBM28-207ENST00000488249 WDR87Q6ZQQ6 2873 aa0.88□□□□□ -2.27
RBM28-207ENST00000488249 MYO18BQ8IUG5 2567 aa0.88□□□□□ -2.27
RBM28-207ENST00000488249 M0QZ58 72 aa0.88□□□□□ -2.27
RBM28-207ENST00000488249 HTN3P15516 51 aa0.88□□□□□ -2.27
RBM28-207ENST00000488249 CREBBPQ92793 2442 aa0.88□□□□□ -2.27
RBM28-207ENST00000488249 AKAP6Q13023 2319 aa0.88□□□□□ -2.27
RBM28-207ENST00000488249 USP9YO00507 2555 aaPredicted RBP0.88□□□□□ -2.27
RBM28-207ENST00000488249 CEP290O15078 2479 aa0.88□□□□□ -2.27
RBM28-207ENST00000488249 STAB1Q9NY15 2570 aa0.87□□□□□ -2.27
RBM28-207ENST00000488249 A0A096LNI7 61 aa0.87□□□□□ -2.27
RBM28-207ENST00000488249 RPS29P62273 56 aaKnown RBP0.87□□□□□ -2.27
RBM28-207ENST00000488249 SPINK6Q6UWN8 80 aa0.87□□□□□ -2.27
RBM28-207ENST00000488249 CEP295Q9C0D2 2601 aa0.87□□□□□ -2.27
RBM28-207ENST00000488249 ZFYVE26Q68DK2 2539 aa0.87□□□□□ -2.27
RBM28-207ENST00000488249 HIVEP3Q5T1R4 2406 aa0.87□□□□□ -2.27
RBM28-207ENST00000488249 TNRC18O15417 2968 aaPredicted RBP0.87□□□□□ -2.27
RBM28-207ENST00000488249 CHD6Q8TD26 2715 aa0.87□□□□□ -2.27
RBM28-207ENST00000488249 SPTA1P02549 2419 aa0.86□□□□□ -2.27
RBM28-207ENST00000488249 DEFB135Q30KP9 77 aa0.86□□□□□ -2.27
RBM28-207ENST00000488249 ACACAQ13085 2346 aa0.86□□□□□ -2.27
RBM28-207ENST00000488249 SPTAN1Q13813 2472 aaKnown RBP0.85□□□□□ -2.27
RBM28-207ENST00000488249 PRRC2CQ9Y520 2896 aaKnown RBP0.85□□□□□ -2.27
RBM28-207ENST00000488249 EP300Q09472 2414 aaPredicted RBP0.85□□□□□ -2.27
RBM28-207ENST00000488249 ACACBO00763 2458 aa0.84□□□□□ -2.27
RBM28-207ENST00000488249 GCN1Q92616 2671 aaKnown RBP0.84□□□□□ -2.27
RBM28-207ENST00000488249 MYCBP2O75592 4640 aa0.84□□□□□ -2.27
RBM28-207ENST00000488249 ATRQ13535 2644 aa0.84□□□□□ -2.27
RBM28-207ENST00000488249 FLNCQ14315 2725 aa0.84□□□□□ -2.28
RBM28-207ENST00000488249 CEP350Q5VT06 3117 aa0.84□□□□□ -2.28
RBM28-207ENST00000488249 CHD9Q3L8U1 2897 aa0.83□□□□□ -2.28
RBM28-207ENST00000488249 FLNAP21333 2647 aaKnown RBP0.83□□□□□ -2.28
RBM28-207ENST00000488249 DEFB4AO15263 64 aa0.83□□□□□ -2.28
RBM28-207ENST00000488249 SPG11Q96JI7 2443 aa0.83□□□□□ -2.28
RBM28-207ENST00000488249 CSMD3Q7Z407 3707 aa0.82□□□□□ -2.28
RBM28-207ENST00000488249 NSD1Q96L73 2696 aaPredicted RBP0.82□□□□□ -2.28
RBM28-207ENST00000488249 VWFP04275 2813 aa0.82□□□□□ -2.28
RBM28-207ENST00000488249 COL6A5A8TX70 2615 aa0.81□□□□□ -2.28
RBM28-207ENST00000488249 MGAQ8IWI9 3026 aa0.81□□□□□ -2.28
RBM28-207ENST00000488249 UTP20O75691 2785 aaKnown RBP0.8□□□□□ -2.28
RBM28-207ENST00000488249 AKAP13Q12802 2813 aa0.8□□□□□ -2.28
RBM28-207ENST00000488249 IGSF10Q6WRI0 2623 aa0.8□□□□□ -2.28
RBM28-207ENST00000488249 CELSR1Q9NYQ6 3014 aa0.8□□□□□ -2.28
RBM28-207ENST00000488249 ZZEF1O43149 2961 aa0.79□□□□□ -2.28
RBM28-207ENST00000488249 KALRNO60229 2985 aa0.79□□□□□ -2.28
RBM28-207ENST00000488249 C9orf92A6NGG3 77 aa0.79□□□□□ -2.28
RBM28-207ENST00000488249 M0R2T5 61 aa0.79□□□□□ -2.28
RBM28-207ENST00000488249 SMR3AQ99954 134 aa0.79□□□□□ -2.28
RBM28-207ENST00000488249 PCNTO95613 3336 aa0.79□□□□□ -2.28
RBM28-207ENST00000488249 NBASA2RRP1 2371 aa0.78□□□□□ -2.28
RBM28-207ENST00000488249 MTORP42345 2549 aa0.78□□□□□ -2.28
RBM28-207ENST00000488249 TENM4Q6N022 2769 aa0.78□□□□□ -2.28
RBM28-207ENST00000488249 NBEAQ8NFP9 2946 aa0.78□□□□□ -2.28
RBM28-207ENST00000488249 TNP1P09430 55 aa0.78□□□□□ -2.28
RBM28-207ENST00000488249 WDFY4Q6ZS81 3184 aa0.78□□□□□ -2.28
RBM28-207ENST00000488249 GPR98Q8WXG9 6306 aa0.78□□□□□ -2.28
RBM28-207ENST00000488249 RIF1Q5UIP0 2472 aaKnown RBP0.78□□□□□ -2.28
RBM28-207ENST00000488249 DNAH12Q6ZR08 3092 aa0.78□□□□□ -2.29
RBM28-207ENST00000488249 SONP18583 2426 aaKnown RBP0.77□□□□□ -2.29
RBM28-207ENST00000488249 TLN1Q9Y490 2541 aaKnown RBP0.77□□□□□ -2.29
RBM28-207ENST00000488249 MAP1AP78559 2803 aaPredicted RBP0.77□□□□□ -2.29
RBM28-207ENST00000488249 NBEAL1Q6ZS30 2694 aa0.77□□□□□ -2.29
RBM28-207ENST00000488249 CFAP46Q8IYW2 2715 aa0.77□□□□□ -2.29
RBM28-207ENST00000488249 SRRM2Q9UQ35 2752 aaKnown RBP0.77□□□□□ -2.29
RBM28-207ENST00000488249 GOLGB1Q14789 3259 aaKnown RBP0.77□□□□□ -2.29
RBM28-207ENST00000488249 ANK2Q01484 3957 aa0.77□□□□□ -2.29
RBM28-207ENST00000488249 NBEAL2Q6ZNJ1 2754 aa0.76□□□□□ -2.29
RBM28-207ENST00000488249 DMBT1Q9UGM3 2413 aaPredicted RBP0.76□□□□□ -2.29
RBM28-207ENST00000488249 KRTAP2-3P0C7H8 128 aa0.76□□□□□ -2.29
RBM28-207ENST00000488249 KRTAP2-4Q9BYR9 128 aa0.76□□□□□ -2.29
RBM28-207ENST00000488249 KRTAP2-1Q9BYU5 128 aa0.76□□□□□ -2.29
RBM28-207ENST00000488249 UTRNP46939 3433 aa0.76□□□□□ -2.29
RBM28-207ENST00000488249 RANBP2P49792 3224 aaKnown RBP0.76□□□□□ -2.29
RBM28-207ENST00000488249 FRYQ5TBA9 3013 aa0.76□□□□□ -2.29
RBM28-207ENST00000488249 CHD7Q9P2D1 2997 aa0.76□□□□□ -2.29
RBM28-207ENST00000488249 ITPR1Q14643 2758 aa0.76□□□□□ -2.29
RBM28-207ENST00000488249 UBR5O95071 2799 aaPredicted RBP0.75□□□□□ -2.29
RBM28-207ENST00000488249 TENM2Q9NT68 2774 aa0.75□□□□□ -2.29
RBM28-207ENST00000488249 CENPFP49454 3210 aa0.75□□□□□ -2.29
RBM28-207ENST00000488249 PRUNE2Q8WUY3 3088 aa0.75□□□□□ -2.29
RBM28-207ENST00000488249 FRYLO94915 3013 aa0.75□□□□□ -2.29
RBM28-207ENST00000488249 FBN2P35556 2912 aa0.75□□□□□ -2.29
RBM28-207ENST00000488249 ACANP16112 2415 aa0.75□□□□□ -2.29
RBM28-207ENST00000488249 TNXBP22105 4242 aa0.75□□□□□ -2.29
RBM28-207ENST00000488249 PKD1L1Q8TDX9 2849 aa0.74□□□□□ -2.29
RBM28-207ENST00000488249 DNAH11Q96DT5 4516 aa0.74□□□□□ -2.29
RBM28-207ENST00000488249 EP400Q96L91 3159 aa0.74□□□□□ -2.29
RBM28-207ENST00000488249 TLN2Q9Y4G6 2542 aa0.74□□□□□ -2.29
RBM28-207ENST00000488249 TRIOO75962 3097 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms