RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 KRTAP10-1P60331 282 aa7.18□□□□□ -1.26
LDLRAP1-207ENST00000488127 PLAC8Q9NZF1 115 aa7.18□□□□□ -1.26
LDLRAP1-207ENST00000488127 SPINK7P58062 85 aa7.18□□□□□ -1.26
LDLRAP1-207ENST00000488127 MMP24-AS1A0A0U1RRL7 71 aa7.15□□□□□ -1.26
LDLRAP1-207ENST00000488127 PANO1I0J062 215 aa7.15□□□□□ -1.26
LDLRAP1-207ENST00000488127 HRES1P13985 223 aa7.15□□□□□ -1.26
LDLRAP1-207ENST00000488127 TENM2Q9NT68 2774 aa7.14□□□□□ -1.27
LDLRAP1-207ENST00000488127 Q6ZR54 194 aa7.13□□□□□ -1.27
LDLRAP1-207ENST00000488127 A0A0D9SG42 100 aa7.13□□□□□ -1.27
LDLRAP1-207ENST00000488127 VWFP04275 2813 aa7.12□□□□□ -1.27
LDLRAP1-207ENST00000488127 CSMD1Q96PZ7 3565 aa7.11□□□□□ -1.27
LDLRAP1-207ENST00000488127 CSAG1Q6PB30 78 aa7.11□□□□□ -1.27
LDLRAP1-207ENST00000488127 CSMD2Q7Z408 3487 aa7.11□□□□□ -1.27
LDLRAP1-207ENST00000488127 SPRR1AP35321 89 aa7.1□□□□□ -1.27
LDLRAP1-207ENST00000488127 KRTAP21-3Q3LHN1 58 aa7.08□□□□□ -1.28
LDLRAP1-207ENST00000488127 COX6B2Q6YFQ2 88 aa7.08□□□□□ -1.28
LDLRAP1-207ENST00000488127 LINC00472Q9H8W2 130 aa7.07□□□□□ -1.28
LDLRAP1-207ENST00000488127 A0A1B0GU33 70 aa7.06□□□□□ -1.28
LDLRAP1-207ENST00000488127 SVEP1Q4LDE5 3571 aa7.06□□□□□ -1.28
LDLRAP1-207ENST00000488127 TGP01266 2768 aa7.06□□□□□ -1.28
LDLRAP1-207ENST00000488127 Q5VSD8 79 aa7.06□□□□□ -1.28
LDLRAP1-207ENST00000488127 CUBNO60494 3623 aa7.05□□□□□ -1.28
LDLRAP1-207ENST00000488127 SPENQ96T58 3664 aaKnown RBP7.02□□□□□ -1.29
LDLRAP1-207ENST00000488127 Q6ZRN7 208 aaPredicted RBP7.01□□□□□ -1.29
LDLRAP1-207ENST00000488127 ZCCHC13Q8WW36 166 aaKnown RBP7.01□□□□□ -1.29
LDLRAP1-207ENST00000488127 SPRR1BP22528 89 aa6.97□□□□□ -1.29
LDLRAP1-207ENST00000488127 Q5W150 140 aa6.97□□□□□ -1.29
LDLRAP1-207ENST00000488127 KRTAP11-1Q8IUC1 163 aa6.95□□□□□ -1.3
LDLRAP1-207ENST00000488127 LUZP6Q538Z0 58 aa6.94□□□□□ -1.3
LDLRAP1-207ENST00000488127 KRTAP29-1A8MX34 341 aaPredicted RBP6.94□□□□□ -1.3
LDLRAP1-207ENST00000488127 SRRM2Q9UQ35 2752 aaKnown RBP6.92□□□□□ -1.3
LDLRAP1-207ENST00000488127 A8MU10 97 aa6.91□□□□□ -1.3
LDLRAP1-207ENST00000488127 KRTAP4-16G5E9R7 235 aaPredicted RBP6.91□□□□□ -1.3
LDLRAP1-207ENST00000488127 A0A087X002 238 aa6.9□□□□□ -1.31
LDLRAP1-207ENST00000488127 Q6ZSA8 131 aa6.9□□□□□ -1.31
LDLRAP1-207ENST00000488127 A6NN06 94 aa6.89□□□□□ -1.31
LDLRAP1-207ENST00000488127 KRTAP7-1Q8IUC3 87 aa6.89□□□□□ -1.31
LDLRAP1-207ENST00000488127 DMAC1Q96GE9 116 aa6.88□□□□□ -1.31
LDLRAP1-207ENST00000488127 ASB16-AS1Q495Z4 193 aa6.84□□□□□ -1.31
LDLRAP1-207ENST00000488127 ADM2Q7Z4H4 148 aa6.81□□□□□ -1.32
LDLRAP1-207ENST00000488127 LINC00483Q53H64 154 aa6.8□□□□□ -1.32
LDLRAP1-207ENST00000488127 SPATA8Q6RVD6 105 aa6.8□□□□□ -1.32
LDLRAP1-207ENST00000488127 BSNQ9UPA5 3926 aa6.8□□□□□ -1.32
LDLRAP1-207ENST00000488127 RPL37P61927 97 aaKnown RBP6.76□□□□□ -1.33
LDLRAP1-207ENST00000488127 ROMO1P60602 79 aa6.76□□□□□ -1.33
LDLRAP1-207ENST00000488127 NOTCH2NLQ7Z3S9 236 aa6.76□□□□□ -1.33
LDLRAP1-207ENST00000488127 TRRAPQ9Y4A5 3859 aa6.76□□□□□ -1.33
LDLRAP1-207ENST00000488127 M0R2T5 61 aa6.74□□□□□ -1.33
LDLRAP1-207ENST00000488127 A0A0A0MQY5 61 aa6.73□□□□□ -1.33
LDLRAP1-207ENST00000488127 H1FX-AS1Q4G0G2 97 aa6.73□□□□□ -1.33
LDLRAP1-207ENST00000488127 CAMK2N1Q7Z7J9 78 aa6.72□□□□□ -1.33
LDLRAP1-207ENST00000488127 KRTAP13-2Q52LG2 175 aa6.7□□□□□ -1.34
LDLRAP1-207ENST00000488127 KRTAP13-1Q8IUC0 172 aa6.67□□□□□ -1.34
LDLRAP1-207ENST00000488127 KRTAP25-1Q3LHN0 102 aa6.67□□□□□ -1.34
LDLRAP1-207ENST00000488127 ANK3Q12955 4377 aaKnown RBP6.67□□□□□ -1.34
LDLRAP1-207ENST00000488127 SEC61BP60468 96 aaKnown RBP6.67□□□□□ -1.34
LDLRAP1-207ENST00000488127 S4R3F8 94 aa6.66□□□□□ -1.34
LDLRAP1-207ENST00000488127 FBN3Q75N90 2809 aa6.62□□□□□ -1.35
LDLRAP1-207ENST00000488127 KRTAP16-1A8MUX0 517 aa6.62□□□□□ -1.35
LDLRAP1-207ENST00000488127 R4GN34 69 aa6.58□□□□□ -1.36
LDLRAP1-207ENST00000488127 COL7A1Q02388 2944 aa6.56□□□□□ -1.36
LDLRAP1-207ENST00000488127 NDUFAF8A1L188 74 aa6.56□□□□□ -1.36
LDLRAP1-207ENST00000488127 M0QZ58 72 aa6.49□□□□□ -1.37
LDLRAP1-207ENST00000488127 KRTAP1-4P0C5Y4 121 aa6.48□□□□□ -1.37
LDLRAP1-207ENST00000488127 RPS29P62273 56 aaKnown RBP6.47□□□□□ -1.37
LDLRAP1-207ENST00000488127 VPS13CQ709C8 3753 aa6.47□□□□□ -1.37
LDLRAP1-207ENST00000488127 A8MUU9 505 aa6.45□□□□□ -1.38
LDLRAP1-207ENST00000488127 ZNF469Q96JG9 3925 aaPredicted RBP6.43□□□□□ -1.38
LDLRAP1-207ENST00000488127 MEGF8Q7Z7M0 2845 aa6.42□□□□□ -1.38
LDLRAP1-207ENST00000488127 A0A1B0GVY2 172 aa6.37□□□□□ -1.39
LDLRAP1-207ENST00000488127 C20orf166-AS1Q96NR2 134 aa6.28□□□□□ -1.4
LDLRAP1-207ENST00000488127 C10orf95Q9H7T3 257 aa6.27□□□□□ -1.41
LDLRAP1-207ENST00000488127 PLAC4Q8WY50 150 aa6.27□□□□□ -1.41
LDLRAP1-207ENST00000488127 XP32Q5T750 250 aa6.26□□□□□ -1.41
LDLRAP1-207ENST00000488127 H0YAA0 97 aa6.26□□□□□ -1.41
LDLRAP1-207ENST00000488127 AKAP9Q99996 3911 aa6.2□□□□□ -1.42
LDLRAP1-207ENST00000488127 DNHD1Q96M86 4753 aa6.18□□□□□ -1.42
LDLRAP1-207ENST00000488127 KRTAP10-8P60410 259 aa6.17□□□□□ -1.42
LDLRAP1-207ENST00000488127 TPRXLQ17RH7 258 aa6.14□□□□□ -1.43
LDLRAP1-207ENST00000488127 KRTAP13-3Q3SY46 172 aa6.12□□□□□ -1.43
LDLRAP1-207ENST00000488127 HUWE1Q7Z6Z7 4374 aaKnown RBP6.11□□□□□ -1.43
LDLRAP1-207ENST00000488127 P0C880 135 aa6.1□□□□□ -1.43
LDLRAP1-207ENST00000488127 CSMD3Q7Z407 3707 aa6.09□□□□□ -1.43
LDLRAP1-207ENST00000488127 TNP1P09430 55 aa6.02□□□□□ -1.45
LDLRAP1-207ENST00000488127 PP632Q6XCG6 107 aa5.97□□□□□ -1.45
LDLRAP1-207ENST00000488127 DNAH9Q9NYC9 4486 aa5.96□□□□□ -1.45
LDLRAP1-207ENST00000488127 KRTAP4-5Q9BYR2 181 aa5.94□□□□□ -1.46
LDLRAP1-207ENST00000488127 KRTAP10-10P60014 251 aa5.88□□□□□ -1.47
LDLRAP1-207ENST00000488127 MT1HL1P0DM35 61 aa5.86□□□□□ -1.47
LDLRAP1-207ENST00000488127 PLECQ15149 4684 aaKnown RBP5.83□□□□□ -1.48
LDLRAP1-207ENST00000488127 DNAH5Q8TE73 4624 aa5.81□□□□□ -1.48
LDLRAP1-207ENST00000488127 KRTAP10-4P60372 401 aaPredicted RBP5.8□□□□□ -1.48
LDLRAP1-207ENST00000488127 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
LDLRAP1-207ENST00000488127 PRKDCP78527 4128 aaKnown RBP5.75□□□□□ -1.49
LDLRAP1-207ENST00000488127 DNAH11Q96DT5 4516 aa5.75□□□□□ -1.49
LDLRAP1-207ENST00000488127 KRTAP3-1Q9BYR8 98 aa5.69□□□□□ -1.5
LDLRAP1-207ENST00000488127 DNAH1Q9P2D7 4330 aa5.69□□□□□ -1.5
LDLRAP1-207ENST00000488127 KRTAP12-1P59990 96 aa5.69□□□□□ -1.5
LDLRAP1-207ENST00000488127 STARD9Q9P2P6 4700 aa5.68□□□□□ -1.5
LDLRAP1-207ENST00000488127 FAT1Q14517 4588 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms