RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 DMXL2Q8TDJ6 3036 aa-1.4□□□□□ -2.63
CCDC66-221ENST00000487739 DNAH5Q8TE73 4624 aa-1.4□□□□□ -2.63
CCDC66-221ENST00000487739 NDUFA4O00483 81 aa-1.4□□□□□ -2.63
CCDC66-221ENST00000487739 LINC00032P0C843 101 aa-1.4□□□□□ -2.63
CCDC66-221ENST00000487739 C14orf144Q96I85 54 aa-1.4□□□□□ -2.63
CCDC66-221ENST00000487739 C20orf78Q9BR46 151 aa-1.4□□□□□ -2.63
CCDC66-221ENST00000487739 RICTORQ6R327 1708 aa-1.4□□□□□ -2.63
CCDC66-221ENST00000487739 ATMQ13315 3056 aa-1.41□□□□□ -2.64
CCDC66-221ENST00000487739 MYMXA0A1B0GTQ4 84 aa-1.41□□□□□ -2.64
CCDC66-221ENST00000487739 NDUFB1O75438 58 aa-1.41□□□□□ -2.64
CCDC66-221ENST00000487739 MT1BP07438 61 aa-1.41□□□□□ -2.64
CCDC66-221ENST00000487739 IFI27P40305 119 aaPredicted RBP-1.41□□□□□ -2.64
CCDC66-221ENST00000487739 SMIM11AP58511 58 aa-1.41□□□□□ -2.64
CCDC66-221ENST00000487739 DPY30Q9C005 99 aa-1.41□□□□□ -2.64
CCDC66-221ENST00000487739 CCNB3Q8WWL7 1395 aa-1.42□□□□□ -2.64
CCDC66-221ENST00000487739 UMAD1C9J7I0 102 aa-1.42□□□□□ -2.64
CCDC66-221ENST00000487739 S100PP25815 95 aa-1.42□□□□□ -2.64
CCDC66-221ENST00000487739 KIAA0586Q9BVV6 1533 aa-1.42□□□□□ -2.64
CCDC66-221ENST00000487739 MAST1Q9Y2H9 1570 aa-1.42□□□□□ -2.64
CCDC66-221ENST00000487739 NRAPQ86VF7 1730 aa-1.43□□□□□ -2.64
CCDC66-221ENST00000487739 ANKRD26Q9UPS8 1709 aa-1.43□□□□□ -2.64
CCDC66-221ENST00000487739 PPLO60437 1756 aa-1.43□□□□□ -2.64
CCDC66-221ENST00000487739 RPS27P42677 84 aaKnown RBP-1.43□□□□□ -2.64
CCDC66-221ENST00000487739 CRIP1P50238 77 aa-1.43□□□□□ -2.64
CCDC66-221ENST00000487739 RPS27LQ71UM5 84 aaKnown RBP-1.43□□□□□ -2.64
CCDC66-221ENST00000487739 LRRIQ1Q96JM4 1722 aa-1.43□□□□□ -2.64
CCDC66-221ENST00000487739 PIK3C2BO00750 1634 aa-1.44□□□□□ -2.64
CCDC66-221ENST00000487739 A0A1B0GUL6 1792 aa-1.44□□□□□ -2.64
CCDC66-221ENST00000487739 CEBPZOSA8MTT3 80 aa-1.44□□□□□ -2.64
CCDC66-221ENST00000487739 ATP6V1G2-DDX39BF2Z307 99 aa-1.44□□□□□ -2.64
CCDC66-221ENST00000487739 NCMAPQ5T1S8 102 aa-1.44□□□□□ -2.64
CCDC66-221ENST00000487739 CNTLNQ9NXG0 1405 aa-1.44□□□□□ -2.64
CCDC66-221ENST00000487739 AKAP12Q02952 1782 aa-1.44□□□□□ -2.64
CCDC66-221ENST00000487739 CFAP43Q8NDM7 1665 aa-1.45□□□□□ -2.64
CCDC66-221ENST00000487739 URB2Q14146 1524 aaKnown RBP-1.45□□□□□ -2.64
CCDC66-221ENST00000487739 DEFB131BA0A096LNP1 70 aa-1.45□□□□□ -2.64
CCDC66-221ENST00000487739 SFTA3P0C7M3 94 aa-1.45□□□□□ -2.64
CCDC66-221ENST00000487739 NCBP2-AS2Q69YL0 99 aa-1.45□□□□□ -2.64
CCDC66-221ENST00000487739 TCEAL7Q9BRU2 100 aa-1.45□□□□□ -2.64
CCDC66-221ENST00000487739 ITPR2Q14571 2701 aa-1.46□□□□□ -2.64
CCDC66-221ENST00000487739 DEFB4AO15263 64 aa-1.46□□□□□ -2.64
CCDC66-221ENST00000487739 NREPQ16612 68 aa-1.46□□□□□ -2.64
CCDC66-221ENST00000487739 RABAC1Q9UI14 185 aa-1.46□□□□□ -2.64
CCDC66-221ENST00000487739 GYPAP02724 150 aa-1.47□□□□□ -2.64
CCDC66-221ENST00000487739 RBP2P50120 134 aa-1.47□□□□□ -2.64
CCDC66-221ENST00000487739 MINOS1Q5TGZ0 78 aa-1.47□□□□□ -2.64
CCDC66-221ENST00000487739 ACBD7Q8N6N7 88 aa-1.47□□□□□ -2.64
CCDC66-221ENST00000487739 SMARCA2P51531 1590 aa-1.47□□□□□ -2.65
CCDC66-221ENST00000487739 RNF17Q9BXT8 1623 aaKnown RBP-1.48□□□□□ -2.65
CCDC66-221ENST00000487739 CSMD2Q7Z408 3487 aa-1.48□□□□□ -2.65
CCDC66-221ENST00000487739 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.48□□□□□ -2.65
CCDC66-221ENST00000487739 LINC01546A6NGU7 62 aa-1.48□□□□□ -2.65
CCDC66-221ENST00000487739 KRTAP20-1Q3LI63 56 aa-1.48□□□□□ -2.65
CCDC66-221ENST00000487739 LINC00643Q86TS7 51 aa-1.48□□□□□ -2.65
CCDC66-221ENST00000487739 NOP10Q9NPE3 64 aaKnown RBP-1.48□□□□□ -2.65
CCDC66-221ENST00000487739 THOC2Q8NI27 1593 aaKnown RBP-1.48□□□□□ -2.65
CCDC66-221ENST00000487739 CEP162Q5TB80 1403 aa-1.49□□□□□ -2.65
CCDC66-221ENST00000487739 TLN1Q9Y490 2541 aaKnown RBP-1.49□□□□□ -2.65
CCDC66-221ENST00000487739 FCER1GP30273 86 aa-1.49□□□□□ -2.65
CCDC66-221ENST00000487739 SNRPFP62306 86 aaKnown RBP-1.49□□□□□ -2.65
CCDC66-221ENST00000487739 BVES-AS1Q5T3Y7 98 aa-1.49□□□□□ -2.65
CCDC66-221ENST00000487739 CCDC88BA6NC98 1476 aa-1.5□□□□□ -2.65
CCDC66-221ENST00000487739 H3BUA1 57 aa-1.5□□□□□ -2.65
CCDC66-221ENST00000487739 MRPL33O75394 65 aaKnown RBP-1.5□□□□□ -2.65
CCDC66-221ENST00000487739 ARHGAP35Q9NRY4 1499 aa-1.5□□□□□ -2.65
CCDC66-221ENST00000487739 MAP3K4Q9Y6R4 1608 aa-1.51□□□□□ -2.65
CCDC66-221ENST00000487739 M0QY20 66 aa-1.52□□□□□ -2.65
CCDC66-221ENST00000487739 SPART-AS1P0CW21 52 aa-1.52□□□□□ -2.65
CCDC66-221ENST00000487739 KCNQ1DNQ9H478 68 aa-1.52□□□□□ -2.65
CCDC66-221ENST00000487739 C6orf48Q9UBA6 75 aa-1.52□□□□□ -2.65
CCDC66-221ENST00000487739 KIF14Q15058 1648 aa-1.52□□□□□ -2.65
CCDC66-221ENST00000487739 MYO5CQ9NQX4 1742 aa-1.52□□□□□ -2.65
CCDC66-221ENST00000487739 FREM2Q5SZK8 3169 aa-1.53□□□□□ -2.65
CCDC66-221ENST00000487739 A0A087WXM4 84 aa-1.53□□□□□ -2.65
CCDC66-221ENST00000487739 A8MTW9 85 aa-1.53□□□□□ -2.65
CCDC66-221ENST00000487739 M0QZ58 72 aa-1.53□□□□□ -2.65
CCDC66-221ENST00000487739 M0R143 59 aa-1.53□□□□□ -2.65
CCDC66-221ENST00000487739 ERVK-7P63135 1459 aa-1.53□□□□□ -2.65
CCDC66-221ENST00000487739 S100A16Q96FQ6 103 aaKnown RBP-1.53□□□□□ -2.65
CCDC66-221ENST00000487739 SNHG12Q9BXW3 62 aa-1.53□□□□□ -2.65
CCDC66-221ENST00000487739 UBL5Q9BZL1 73 aa-1.53□□□□□ -2.65
CCDC66-221ENST00000487739 PEG3Q9GZU2 1588 aa-1.53□□□□□ -2.65
CCDC66-221ENST00000487739 INO80Q9ULG1 1556 aaPredicted RBP-1.53□□□□□ -2.65
CCDC66-221ENST00000487739 ASXL1Q8IXJ9 1541 aa-1.54□□□□□ -2.66
CCDC66-221ENST00000487739 HFM1A2PYH4 1435 aa-1.54□□□□□ -2.66
CCDC66-221ENST00000487739 SMIM13P0DJ93 91 aa-1.54□□□□□ -2.66
CCDC66-221ENST00000487739 MYO15AQ9UKN7 3530 aa-1.54□□□□□ -2.66
CCDC66-221ENST00000487739 HMGA1P17096 107 aaKnown RBP-1.55□□□□□ -2.66
CCDC66-221ENST00000487739 PYY3Q5JQD4 70 aa-1.55□□□□□ -2.66
CCDC66-221ENST00000487739 NHSQ6T4R5 1651 aa-1.55□□□□□ -2.66
CCDC66-221ENST00000487739 CRYBG3Q68DQ2 2970 aa-1.56□□□□□ -2.66
CCDC66-221ENST00000487739 BOD1L1Q8NFC6 3051 aa-1.56□□□□□ -2.66
CCDC66-221ENST00000487739 PVALEFA0A1B0GWK0 134 aa-1.56□□□□□ -2.66
CCDC66-221ENST00000487739 RALGAPBQ86X10 1494 aa-1.56□□□□□ -2.66
CCDC66-221ENST00000487739 ETDCA0A1B0GVM5 59 aa-1.57□□□□□ -2.66
CCDC66-221ENST00000487739 ENHOQ6UWT2 76 aa-1.57□□□□□ -2.66
CCDC66-221ENST00000487739 PRUNE2Q8WUY3 3088 aa-1.57□□□□□ -2.66
CCDC66-221ENST00000487739 ZFHX4Q86UP3 3567 aa-1.57□□□□□ -2.66
CCDC66-221ENST00000487739 ATP5EP2Q5VTU8 51 aa-1.58□□□□□ -2.66
CCDC66-221ENST00000487739 KDM5DQ9BY66 1539 aa-1.58□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms