RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 LINC00208Q96KT6 92 aa1.39□□□□□ -2.19
UBR3-211ENST00000487689 OBSCN-AS1Q96MR7 158 aa1.39□□□□□ -2.19
UBR3-211ENST00000487689 S100A13Q99584 98 aa1.39□□□□□ -2.19
UBR3-211ENST00000487689 R4GMQ9 66 aa1.39□□□□□ -2.19
UBR3-211ENST00000487689 V9GYH0 126 aa1.39□□□□□ -2.19
UBR3-211ENST00000487689 TMEM14DPA8MWL7 114 aa1.38□□□□□ -2.19
UBR3-211ENST00000487689 H3BQF6 201 aa1.38□□□□□ -2.19
UBR3-211ENST00000487689 SYS1-DBNDD2H3BUS1 97 aa1.38□□□□□ -2.19
UBR3-211ENST00000487689 M0R2T5 61 aa1.38□□□□□ -2.19
UBR3-211ENST00000487689 BCE1O60756 84 aa1.38□□□□□ -2.19
UBR3-211ENST00000487689 APOC3P02656 99 aa1.38□□□□□ -2.19
UBR3-211ENST00000487689 TRAPPC2P0DI81 140 aa1.38□□□□□ -2.19
UBR3-211ENST00000487689 TRAPPC2BP0DI82 140 aa1.38□□□□□ -2.19
UBR3-211ENST00000487689 DEFA5Q01523 94 aa1.38□□□□□ -2.19
UBR3-211ENST00000487689 TMEM170BQ5T4T1 132 aa1.38□□□□□ -2.19
UBR3-211ENST00000487689 Q5VV11 94 aa1.38□□□□□ -2.19
UBR3-211ENST00000487689 HEPN1Q6WQI6 88 aa1.38□□□□□ -2.19
UBR3-211ENST00000487689 S100A16Q96FQ6 103 aaKnown RBP1.38□□□□□ -2.19
UBR3-211ENST00000487689 CDC42SE2Q9NRR3 84 aa1.38□□□□□ -2.19
UBR3-211ENST00000487689 NDUFA4L2Q9NRX3 87 aa1.38□□□□□ -2.19
UBR3-211ENST00000487689 FXYD1O00168 92 aa1.37□□□□□ -2.19
UBR3-211ENST00000487689 HMGN4O00479 90 aa1.37□□□□□ -2.19
UBR3-211ENST00000487689 C20orf78Q9BR46 151 aa1.37□□□□□ -2.19
UBR3-211ENST00000487689 NXT2Q9NPJ8 142 aaKnown RBP1.37□□□□□ -2.19
UBR3-211ENST00000487689 TMEM14BQ9NUH8 114 aa1.37□□□□□ -2.19
UBR3-211ENST00000487689 H3BUA1 57 aa1.36□□□□□ -2.19
UBR3-211ENST00000487689 H7BZZ5 65 aa1.36□□□□□ -2.19
UBR3-211ENST00000487689 NMBP08949 121 aa1.36□□□□□ -2.19
UBR3-211ENST00000487689 SPRR2EP22531 72 aa1.36□□□□□ -2.19
UBR3-211ENST00000487689 SPRR2BP35325 72 aa1.36□□□□□ -2.19
UBR3-211ENST00000487689 SPRR2AP35326 72 aa1.36□□□□□ -2.19
UBR3-211ENST00000487689 SMIM11AP58511 58 aa1.36□□□□□ -2.19
UBR3-211ENST00000487689 SPINK6Q6UWN8 80 aa1.36□□□□□ -2.19
UBR3-211ENST00000487689 FAM103A1Q9BTL3 118 aaKnown RBP1.36□□□□□ -2.19
UBR3-211ENST00000487689 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.35□□□□□ -2.19
UBR3-211ENST00000487689 NDUFA3O95167 84 aa1.35□□□□□ -2.19
UBR3-211ENST00000487689 PMCHL1Q16048 86 aa1.35□□□□□ -2.19
UBR3-211ENST00000487689 LINC00575Q6W349 94 aa1.35□□□□□ -2.19
UBR3-211ENST00000487689 BAGE3Q86Y29 109 aa1.35□□□□□ -2.19
UBR3-211ENST00000487689 USMG5Q96IX5 58 aa1.35□□□□□ -2.19
UBR3-211ENST00000487689 TRBV25-1A0A075B6N4 114 aa1.34□□□□□ -2.19
UBR3-211ENST00000487689 A0A0G2JND7 137 aa1.34□□□□□ -2.19
UBR3-211ENST00000487689 TRBV30A0A0K0K1B3 111 aa1.34□□□□□ -2.19
UBR3-211ENST00000487689 A0A1B0GWA3 101 aa1.34□□□□□ -2.19
UBR3-211ENST00000487689 A0A1W2PPM0 123 aa1.34□□□□□ -2.19
UBR3-211ENST00000487689 IGLC7A0M8Q6 106 aa1.34□□□□□ -2.19
UBR3-211ENST00000487689 F8VRH5 84 aa1.34□□□□□ -2.19
UBR3-211ENST00000487689 NCR3O14931 201 aa1.34□□□□□ -2.19
UBR3-211ENST00000487689 SAA2P0DJI9 122 aaPredicted RBP1.34□□□□□ -2.19
UBR3-211ENST00000487689 KRTAP12-1P59990 96 aa1.34□□□□□ -2.19
UBR3-211ENST00000487689 TDRG1Q3Y452 100 aa1.34□□□□□ -2.19
UBR3-211ENST00000487689 LEAP2Q969E1 77 aa1.34□□□□□ -2.19
UBR3-211ENST00000487689 UQCR11O14957 56 aa1.33□□□□□ -2.2
UBR3-211ENST00000487689 MT2AP02795 61 aa1.33□□□□□ -2.2
UBR3-211ENST00000487689 ADIRFQ15847 76 aa1.33□□□□□ -2.2
UBR3-211ENST00000487689 RPS27LQ71UM5 84 aaKnown RBP1.33□□□□□ -2.2
UBR3-211ENST00000487689 LINC01558Q9Y6Z2 57 aa1.33□□□□□ -2.2
UBR3-211ENST00000487689 KANTRA0A1W2PQU2 76 aa1.32□□□□□ -2.2
UBR3-211ENST00000487689 M0R135 149 aa1.32□□□□□ -2.2
UBR3-211ENST00000487689 MT1FP04733 61 aa1.32□□□□□ -2.2
UBR3-211ENST00000487689 SPRR2DP22532 72 aa1.32□□□□□ -2.2
UBR3-211ENST00000487689 SPINK13Q1W4C9 94 aa1.32□□□□□ -2.2
UBR3-211ENST00000487689 BAGE2Q86Y30 109 aa1.32□□□□□ -2.2
UBR3-211ENST00000487689 SMIM4Q8WVI0 70 aa1.32□□□□□ -2.2
UBR3-211ENST00000487689 ST20Q9HBF5 79 aa1.32□□□□□ -2.2
UBR3-211ENST00000487689 ARL2-SNX15V9GYD0 113 aa1.32□□□□□ -2.2
UBR3-211ENST00000487689 A0A096LPF7 62 aa1.31□□□□□ -2.2
UBR3-211ENST00000487689 ZNF815PA8K554 130 aa1.31□□□□□ -2.2
UBR3-211ENST00000487689 H3BNG1 76 aa1.31□□□□□ -2.2
UBR3-211ENST00000487689 ARL14EPLP0DKL9 152 aa1.31□□□□□ -2.2
UBR3-211ENST00000487689 ZNF137PP52743 207 aa1.31□□□□□ -2.2
UBR3-211ENST00000487689 DEFB131AP59861 70 aa1.31□□□□□ -2.2
UBR3-211ENST00000487689 HMGN3Q15651 99 aa1.31□□□□□ -2.2
UBR3-211ENST00000487689 SFTA2Q6UW10 78 aa1.31□□□□□ -2.2
UBR3-211ENST00000487689 Q96NJ1 140 aa1.31□□□□□ -2.2
UBR3-211ENST00000487689 TRGV1A0A0A0MS02 117 aa1.3□□□□□ -2.2
UBR3-211ENST00000487689 CTXND1A0A1B0GTU2 59 aa1.3□□□□□ -2.2
UBR3-211ENST00000487689 ACYP1P07311 99 aa1.3□□□□□ -2.2
UBR3-211ENST00000487689 ACYP2P14621 99 aa1.3□□□□□ -2.2
UBR3-211ENST00000487689 COX17Q14061 63 aa1.3□□□□□ -2.2
UBR3-211ENST00000487689 ETDBQ3ZM63 59 aa1.3□□□□□ -2.2
UBR3-211ENST00000487689 PSMG4Q5JS54 123 aa1.3□□□□□ -2.2
UBR3-211ENST00000487689 HIGD1BQ9P298 99 aa1.3□□□□□ -2.2
UBR3-211ENST00000487689 SPCS1Q9Y6A9 102 aa1.3□□□□□ -2.2
UBR3-211ENST00000487689 FAM223BA6NKX1 122 aa1.29□□□□□ -2.2
UBR3-211ENST00000487689 F2Z2F3 143 aa1.29□□□□□ -2.2
UBR3-211ENST00000487689 PRH1P02810 166 aa1.29□□□□□ -2.2
UBR3-211ENST00000487689 MGPP08493 103 aa1.29□□□□□ -2.2
UBR3-211ENST00000487689 DEFB130BP0DP73 79 aa1.29□□□□□ -2.2
UBR3-211ENST00000487689 DEFB130AP0DP74 79 aa1.29□□□□□ -2.2
UBR3-211ENST00000487689 NMSQ5H8A3 153 aa1.29□□□□□ -2.2
UBR3-211ENST00000487689 ALKAL2Q6UX46 152 aa1.29□□□□□ -2.2
UBR3-211ENST00000487689 WFDC10BQ8IUB3 73 aa1.29□□□□□ -2.2
UBR3-211ENST00000487689 FAM223AQ8IWN6 122 aa1.29□□□□□ -2.2
UBR3-211ENST00000487689 TRAV1-2A0A0B4J238 106 aa1.28□□□□□ -2.2
UBR3-211ENST00000487689 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.28□□□□□ -2.2
UBR3-211ENST00000487689 LINC00643Q86TS7 51 aa1.28□□□□□ -2.2
UBR3-211ENST00000487689 PLAC4Q8WY50 150 aa1.28□□□□□ -2.2
UBR3-211ENST00000487689 SMIM11BQ8TCY0 68 aa1.27□□□□□ -2.21
UBR3-211ENST00000487689 SPRR2FQ96RM1 72 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms