RNA–Protein interactions for RNA: ENST00000484988.2

SGIP1-211, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-211ENST00000484988 RPL39P62891 51 aaKnown RBP0.38□□□□□ -2.35
SGIP1-211ENST00000484988 LEAP2Q969E1 77 aa0.38□□□□□ -2.35
SGIP1-211ENST00000484988 SYNE1Q8NF91 8797 aaKnown RBP0.38□□□□□ -2.35
SGIP1-211ENST00000484988 MTORP42345 2549 aa0.37□□□□□ -2.35
SGIP1-211ENST00000484988 SPG11Q96JI7 2443 aa0.37□□□□□ -2.35
SGIP1-211ENST00000484988 NSD1Q96L73 2696 aaPredicted RBP0.37□□□□□ -2.35
SGIP1-211ENST00000484988 TNP1P09430 55 aa0.37□□□□□ -2.35
SGIP1-211ENST00000484988 KIF21BO75037 1637 aa0.37□□□□□ -2.35
SGIP1-211ENST00000484988 TOP2AP11388 1531 aaKnown RBP0.37□□□□□ -2.35
SGIP1-211ENST00000484988 CCDC168Q8NDH2 2452 aa0.36□□□□□ -2.35
SGIP1-211ENST00000484988 A8MTW9 85 aa0.36□□□□□ -2.35
SGIP1-211ENST00000484988 SPRR2DP22532 72 aa0.36□□□□□ -2.35
SGIP1-211ENST00000484988 LRRK2Q5S007 2527 aa0.36□□□□□ -2.35
SGIP1-211ENST00000484988 M0QZ58 72 aa0.35□□□□□ -2.35
SGIP1-211ENST00000484988 SNRPGP62308 76 aaKnown RBP0.35□□□□□ -2.35
SGIP1-211ENST00000484988 DEFB104AQ8WTQ1 72 aa0.35□□□□□ -2.35
SGIP1-211ENST00000484988 DCHS2Q6V1P9 2916 aa0.34□□□□□ -2.36
SGIP1-211ENST00000484988 RPL39LQ96EH5 51 aaKnown RBP0.34□□□□□ -2.36
SGIP1-211ENST00000484988 GCN1Q92616 2671 aaKnown RBP0.34□□□□□ -2.36
SGIP1-211ENST00000484988 CACNA1AO00555 2505 aa0.34□□□□□ -2.36
SGIP1-211ENST00000484988 CLTCL1P53675 1640 aa0.34□□□□□ -2.36
SGIP1-211ENST00000484988 TNXBP22105 4242 aa0.33□□□□□ -2.36
SGIP1-211ENST00000484988 HRNRQ86YZ3 2850 aaPredicted RBP0.33□□□□□ -2.36
SGIP1-211ENST00000484988 NF1P21359 2839 aa0.32□□□□□ -2.36
SGIP1-211ENST00000484988 FAT2Q9NYQ8 4349 aa0.32□□□□□ -2.36
SGIP1-211ENST00000484988 CLPSL2Q6UWE3 100 aa0.32□□□□□ -2.36
SGIP1-211ENST00000484988 FASNP49327 2511 aaKnown RBP0.32□□□□□ -2.36
SGIP1-211ENST00000484988 TRPM2O94759 1503 aa0.32□□□□□ -2.36
SGIP1-211ENST00000484988 LYSTQ99698 3801 aa0.32□□□□□ -2.36
SGIP1-211ENST00000484988 COL6A5A8TX70 2615 aa0.31□□□□□ -2.36
SGIP1-211ENST00000484988 SPRR2GQ9BYE4 73 aa0.31□□□□□ -2.36
SGIP1-211ENST00000484988 UTP20O75691 2785 aaKnown RBP0.31□□□□□ -2.36
SGIP1-211ENST00000484988 SONP18583 2426 aaKnown RBP0.3□□□□□ -2.36
SGIP1-211ENST00000484988 DMXL1Q9Y485 3027 aa0.3□□□□□ -2.36
SGIP1-211ENST00000484988 MAST4O15021 2626 aa0.3□□□□□ -2.36
SGIP1-211ENST00000484988 FLNCQ14315 2725 aa0.29□□□□□ -2.36
SGIP1-211ENST00000484988 SPRR2BP35325 72 aa0.29□□□□□ -2.36
SGIP1-211ENST00000484988 KRTAP6-2Q3LI66 62 aa0.29□□□□□ -2.36
SGIP1-211ENST00000484988 RIF1Q5UIP0 2472 aaKnown RBP0.29□□□□□ -2.36
SGIP1-211ENST00000484988 FAT4Q6V0I7 4981 aa0.29□□□□□ -2.36
SGIP1-211ENST00000484988 FLNAP21333 2647 aaKnown RBP0.29□□□□□ -2.36
SGIP1-211ENST00000484988 ANKHD1Q8IWZ3 2542 aaKnown RBP0.28□□□□□ -2.36
SGIP1-211ENST00000484988 AHNAKQ09666 5890 aaKnown RBP0.27□□□□□ -2.37
SGIP1-211ENST00000484988 PHGR1C9JFL3 82 aa0.27□□□□□ -2.37
SGIP1-211ENST00000484988 MUC5BQ9HC84 5762 aaPredicted RBP0.27□□□□□ -2.37
SGIP1-211ENST00000484988 TENM2Q9NT68 2774 aa0.27□□□□□ -2.37
SGIP1-211ENST00000484988 SETD2Q9BYW2 2564 aaPredicted RBP0.26□□□□□ -2.37
SGIP1-211ENST00000484988 COL7A1Q02388 2944 aa0.26□□□□□ -2.37
SGIP1-211ENST00000484988 FAM186AA6NE01 2351 aa0.26□□□□□ -2.37
SGIP1-211ENST00000484988 LRP1Q07954 4544 aaKnown RBP0.25□□□□□ -2.37
SGIP1-211ENST00000484988 SAMD9LQ8IVG5 1584 aa0.25□□□□□ -2.37
SGIP1-211ENST00000484988 MDN1Q9NU22 5596 aa0.25□□□□□ -2.37
SGIP1-211ENST00000484988 HUWE1Q7Z6Z7 4374 aaKnown RBP0.25□□□□□ -2.37
SGIP1-211ENST00000484988 PDZD2O15018 2839 aa0.24□□□□□ -2.37
SGIP1-211ENST00000484988 ACACBO00763 2458 aa0.24□□□□□ -2.37
SGIP1-211ENST00000484988 TTTY10Q9BZA0 68 aa0.24□□□□□ -2.37
SGIP1-211ENST00000484988 NBEAL1Q6ZS30 2694 aa0.24□□□□□ -2.37
SGIP1-211ENST00000484988 STAB1Q9NY15 2570 aa0.24□□□□□ -2.37
SGIP1-211ENST00000484988 PRKDCP78527 4128 aaKnown RBP0.23□□□□□ -2.37
SGIP1-211ENST00000484988 ATP7AQ04656 1500 aa0.23□□□□□ -2.37
SGIP1-211ENST00000484988 MYO18BQ8IUG5 2567 aa0.23□□□□□ -2.37
SGIP1-211ENST00000484988 EPG5Q9HCE0 2579 aa0.23□□□□□ -2.37
SGIP1-211ENST00000484988 H3BSH0 61 aa0.23□□□□□ -2.37
SGIP1-211ENST00000484988 ARHGAP5-AS1Q96IT6 56 aa0.23□□□□□ -2.37
SGIP1-211ENST00000484988 NBEAL2Q6ZNJ1 2754 aa0.23□□□□□ -2.37
SGIP1-211ENST00000484988 ANKRD11Q6UB99 2663 aaPredicted RBP0.22□□□□□ -2.37
SGIP1-211ENST00000484988 ZZEF1O43149 2961 aa0.22□□□□□ -2.37
SGIP1-211ENST00000484988 HSPG2P98160 4391 aa0.22□□□□□ -2.37
SGIP1-211ENST00000484988 A0A096LNI7 61 aa0.22□□□□□ -2.37
SGIP1-211ENST00000484988 DEFB1P60022 68 aa0.22□□□□□ -2.37
SGIP1-211ENST00000484988 MYCBP2O75592 4640 aa0.22□□□□□ -2.37
SGIP1-211ENST00000484988 HIVEP1P15822 2718 aa0.22□□□□□ -2.37
SGIP1-211ENST00000484988 SPRR2AP35326 72 aa0.21□□□□□ -2.38
SGIP1-211ENST00000484988 NBEAQ8NFP9 2946 aa0.21□□□□□ -2.38
SGIP1-211ENST00000484988 TEP1Q99973 2627 aaKnown RBP0.21□□□□□ -2.38
SGIP1-211ENST00000484988 KMT2AQ03164 3969 aa0.21□□□□□ -2.38
SGIP1-211ENST00000484988 MGAM2Q2M2H8 2515 aa0.2□□□□□ -2.38
SGIP1-211ENST00000484988 KALRNO60229 2985 aa0.2□□□□□ -2.38
SGIP1-211ENST00000484988 ZANQ9Y493 2812 aa0.2□□□□□ -2.38
SGIP1-211ENST00000484988 SVEP1Q4LDE5 3571 aa0.2□□□□□ -2.38
SGIP1-211ENST00000484988 DUOX1Q9NRD9 1551 aa0.19□□□□□ -2.38
SGIP1-211ENST00000484988 HMCN2Q8NDA2 5059 aa0.19□□□□□ -2.38
SGIP1-211ENST00000484988 CUBNO60494 3623 aa0.19□□□□□ -2.38
SGIP1-211ENST00000484988 LPAP08519 4548 aa0.18□□□□□ -2.38
SGIP1-211ENST00000484988 MT1AP04731 61 aa0.18□□□□□ -2.38
SGIP1-211ENST00000484988 LINC01590Q5TEZ4 76 aa0.18□□□□□ -2.38
SGIP1-211ENST00000484988 MUC5ACP98088 5654 aa0.18□□□□□ -2.38
SGIP1-211ENST00000484988 SPRR2EP22531 72 aa0.17□□□□□ -2.38
SGIP1-211ENST00000484988 MAP1AP78559 2803 aaPredicted RBP0.17□□□□□ -2.38
SGIP1-211ENST00000484988 TACC2O95359 2948 aa0.17□□□□□ -2.38
SGIP1-211ENST00000484988 HECTD4Q9Y4D8 3996 aa0.16□□□□□ -2.38
SGIP1-211ENST00000484988 STAB2Q8WWQ8 2551 aa0.16□□□□□ -2.38
SGIP1-211ENST00000484988 USP9XQ93008 2570 aaPredicted RBP0.16□□□□□ -2.38
SGIP1-211ENST00000484988 TLN2Q9Y4G6 2542 aa0.16□□□□□ -2.38
SGIP1-211ENST00000484988 TGP01266 2768 aa0.16□□□□□ -2.38
SGIP1-211ENST00000484988 MROH2BQ7Z745 1585 aa0.15□□□□□ -2.38
SGIP1-211ENST00000484988 SPRR2FQ96RM1 72 aa0.15□□□□□ -2.39
SGIP1-211ENST00000484988 MXRA5Q9NR99 2828 aa0.15□□□□□ -2.39
SGIP1-211ENST00000484988 VPS13BQ7Z7G8 4022 aa0.15□□□□□ -2.39
SGIP1-211ENST00000484988 COL6A3P12111 3177 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms