RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 HIGD2AQ9BW72 106 aa4.74□□□□□ -1.65
SNX13-208ENST00000482558 IGKV4-1P06312 121 aa4.73□□□□□ -1.65
SNX13-208ENST00000482558 PRLHP81277 87 aa4.73□□□□□ -1.65
SNX13-208ENST00000482558 KLKP1Q107X0 134 aa4.73□□□□□ -1.65
SNX13-208ENST00000482558 Q6ZR54 194 aa4.73□□□□□ -1.65
SNX13-208ENST00000482558 PHF5AQ7RTV0 110 aaKnown RBP4.73□□□□□ -1.65
SNX13-208ENST00000482558 KRTAP4-4Q9BYR3 166 aa4.73□□□□□ -1.65
SNX13-208ENST00000482558 K7ERS5 55 aa4.72□□□□□ -1.65
SNX13-208ENST00000482558 IGFL1Q6UW32 110 aa4.72□□□□□ -1.65
SNX13-208ENST00000482558 ATP5EP56381 51 aaPredicted RBP4.71□□□□□ -1.66
SNX13-208ENST00000482558 C1orf134Q5TEV5 83 aa4.71□□□□□ -1.66
SNX13-208ENST00000482558 LCA10Q71F78 164 aa4.71□□□□□ -1.66
SNX13-208ENST00000482558 PRR15Q8IV56 129 aa4.71□□□□□ -1.66
SNX13-208ENST00000482558 RTL8CO15255 209 aa4.7□□□□□ -1.66
SNX13-208ENST00000482558 KRTAP13-1Q8IUC0 172 aa4.7□□□□□ -1.66
SNX13-208ENST00000482558 C20orf197Q8N268 126 aa4.7□□□□□ -1.66
SNX13-208ENST00000482558 PLAC8Q9NZF1 115 aa4.7□□□□□ -1.66
SNX13-208ENST00000482558 DNAH7Q8WXX0 4024 aa4.69□□□□□ -1.66
SNX13-208ENST00000482558 PLECQ15149 4684 aaKnown RBP4.69□□□□□ -1.66
SNX13-208ENST00000482558 COL7A1Q02388 2944 aa4.69□□□□□ -1.66
SNX13-208ENST00000482558 KRTAP10-5P60370 271 aa4.69□□□□□ -1.66
SNX13-208ENST00000482558 VPS13DQ5THJ4 4388 aa4.68□□□□□ -1.66
SNX13-208ENST00000482558 LINC00483Q53H64 154 aa4.68□□□□□ -1.66
SNX13-208ENST00000482558 DSCR10P59022 87 aa4.67□□□□□ -1.66
SNX13-208ENST00000482558 A0A087WSZ3 146 aa4.66□□□□□ -1.66
SNX13-208ENST00000482558 HCG22E2RYF7 251 aa4.66□□□□□ -1.66
SNX13-208ENST00000482558 TMEM254Q8TBM7 123 aa4.66□□□□□ -1.66
SNX13-208ENST00000482558 ZNF861PO60384 105 aa4.65□□□□□ -1.67
SNX13-208ENST00000482558 Q5XG85 94 aa4.65□□□□□ -1.67
SNX13-208ENST00000482558 KRTAP11-1Q8IUC1 163 aa4.65□□□□□ -1.67
SNX13-208ENST00000482558 Q8N9L7 120 aa4.65□□□□□ -1.67
SNX13-208ENST00000482558 CIRBP-AS1Q8TBR5 109 aa4.65□□□□□ -1.67
SNX13-208ENST00000482558 DNAH10Q8IVF4 4471 aa4.64□□□□□ -1.67
SNX13-208ENST00000482558 LCE6AA0A183 80 aa4.64□□□□□ -1.67
SNX13-208ENST00000482558 H7BZZ5 65 aa4.64□□□□□ -1.67
SNX13-208ENST00000482558 NDUFB1O75438 58 aa4.64□□□□□ -1.67
SNX13-208ENST00000482558 CSMD3Q7Z407 3707 aa4.63□□□□□ -1.67
SNX13-208ENST00000482558 A8MWP4 228 aa4.63□□□□□ -1.67
SNX13-208ENST00000482558 H3BPC8 53 aa4.63□□□□□ -1.67
SNX13-208ENST00000482558 PANO1I0J062 215 aa4.63□□□□□ -1.67
SNX13-208ENST00000482558 K7EQZ3 153 aa4.63□□□□□ -1.67
SNX13-208ENST00000482558 TYMSOSQ8TAI1 123 aa4.63□□□□□ -1.67
SNX13-208ENST00000482558 LINC00472Q9H8W2 130 aa4.63□□□□□ -1.67
SNX13-208ENST00000482558 PSORS1C2Q9UIG4 136 aa4.63□□□□□ -1.67
SNX13-208ENST00000482558 SERP1Q9Y6X1 66 aa4.63□□□□□ -1.67
SNX13-208ENST00000482558 PRKDCP78527 4128 aaKnown RBP4.62□□□□□ -1.67
SNX13-208ENST00000482558 MEGF8Q7Z7M0 2845 aa4.62□□□□□ -1.67
SNX13-208ENST00000482558 LY6G6CO95867 125 aa4.62□□□□□ -1.67
SNX13-208ENST00000482558 DNAH6Q9C0G6 4158 aa4.62□□□□□ -1.67
SNX13-208ENST00000482558 LYSTQ99698 3801 aa4.61□□□□□ -1.67
SNX13-208ENST00000482558 CYSTM1Q9H1C7 97 aa4.61□□□□□ -1.67
SNX13-208ENST00000482558 TENM2Q9NT68 2774 aa4.6□□□□□ -1.67
SNX13-208ENST00000482558 STARD9Q9P2P6 4700 aa4.6□□□□□ -1.67
SNX13-208ENST00000482558 SNURFQ9Y675 71 aa4.6□□□□□ -1.67
SNX13-208ENST00000482558 IGLV7-43P04211 117 aa4.59□□□□□ -1.67
SNX13-208ENST00000482558 LINC01554Q52M75 96 aa4.59□□□□□ -1.67
SNX13-208ENST00000482558 SSBP3-AS1Q7Z2R9 100 aa4.59□□□□□ -1.67
SNX13-208ENST00000482558 A6NED7 52 aa4.58□□□□□ -1.68
SNX13-208ENST00000482558 MOBPQ13875 183 aa4.58□□□□□ -1.68
SNX13-208ENST00000482558 CASC2Q6XLA1 102 aa4.58□□□□□ -1.68
SNX13-208ENST00000482558 TP53AIP1Q9HCN2 124 aa4.58□□□□□ -1.68
SNX13-208ENST00000482558 DNAH17Q9UFH2 4485 aa4.58□□□□□ -1.68
SNX13-208ENST00000482558 HECTD4Q9Y4D8 3996 aa4.57□□□□□ -1.68
SNX13-208ENST00000482558 KRTAP9-6A8MVA2 160 aa4.57□□□□□ -1.68
SNX13-208ENST00000482558 DNAH2Q9P225 4427 aa4.56□□□□□ -1.68
SNX13-208ENST00000482558 A0A0G2JQZ4 141 aa4.55□□□□□ -1.68
SNX13-208ENST00000482558 hDV103S1A0JD37 113 aa4.55□□□□□ -1.68
SNX13-208ENST00000482558 ASB16-AS1Q495Z4 193 aa4.55□□□□□ -1.68
SNX13-208ENST00000482558 FAM229BQ4G0N7 80 aa4.55□□□□□ -1.68
SNX13-208ENST00000482558 Q6ZSA8 131 aa4.55□□□□□ -1.68
SNX13-208ENST00000482558 ADM2Q7Z4H4 148 aa4.55□□□□□ -1.68
SNX13-208ENST00000482558 WFDC13Q8IUB5 93 aa4.55□□□□□ -1.68
SNX13-208ENST00000482558 BRK1Q8WUW1 75 aa4.55□□□□□ -1.68
SNX13-208ENST00000482558 ZCCHC13Q8WW36 166 aaKnown RBP4.55□□□□□ -1.68
SNX13-208ENST00000482558 ALMS1Q8TCU4 4167 aa4.54□□□□□ -1.68
SNX13-208ENST00000482558 DEFB116Q30KQ4 102 aa4.54□□□□□ -1.68
SNX13-208ENST00000482558 Q96NJ1 140 aa4.53□□□□□ -1.68
SNX13-208ENST00000482558 RYR3Q15413 4870 aa4.52□□□□□ -1.69
SNX13-208ENST00000482558 MMP24-AS1A0A0U1RRL7 71 aa4.52□□□□□ -1.69
SNX13-208ENST00000482558 SPANXA2-OT1Q8N9U9 137 aa4.52□□□□□ -1.69
SNX13-208ENST00000482558 TGP01266 2768 aa4.51□□□□□ -1.69
SNX13-208ENST00000482558 H0Y9P7 68 aa4.51□□□□□ -1.69
SNX13-208ENST00000482558 CYP4F30PQ9H0H9 118 aa4.51□□□□□ -1.69
SNX13-208ENST00000482558 TRAV22A0A0B4J277 110 aa4.5□□□□□ -1.69
SNX13-208ENST00000482558 KMT2AQ03164 3969 aa4.5□□□□□ -1.69
SNX13-208ENST00000482558 DNAH8Q96JB1 4490 aa4.5□□□□□ -1.69
SNX13-208ENST00000482558 KMT2CQ8NEZ4 4911 aaKnown RBP4.49□□□□□ -1.69
SNX13-208ENST00000482558 LINC00208Q96KT6 92 aa4.49□□□□□ -1.69
SNX13-208ENST00000482558 MRPL34Q9BQ48 92 aaKnown RBP4.48□□□□□ -1.69
SNX13-208ENST00000482558 LIMD2Q9BT23 127 aa4.48□□□□□ -1.69
SNX13-208ENST00000482558 C1orf64Q8NEQ6 169 aa4.47□□□□□ -1.69
SNX13-208ENST00000482558 KRTAP10-1P60331 282 aa4.46□□□□□ -1.7
SNX13-208ENST00000482558 SRRM2Q9UQ35 2752 aaKnown RBP4.46□□□□□ -1.7
SNX13-208ENST00000482558 Q5W150 140 aa4.45□□□□□ -1.7
SNX13-208ENST00000482558 ANAPC11Q9NYG5 84 aa4.45□□□□□ -1.7
SNX13-208ENST00000482558 A8MUU9 505 aa4.44□□□□□ -1.7
SNX13-208ENST00000482558 SPINK6Q6UWN8 80 aa4.44□□□□□ -1.7
SNX13-208ENST00000482558 DNAH5Q8TE73 4624 aa4.44□□□□□ -1.7
SNX13-208ENST00000482558 DNAH11Q96DT5 4516 aa4.43□□□□□ -1.7
SNX13-208ENST00000482558 FRAS1Q86XX4 4008 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms