RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 Q6ZR54 194 aa5.47□□□□□ -1.53
CALD1-220ENST00000482470 FBN3Q75N90 2809 aa5.47□□□□□ -1.53
CALD1-220ENST00000482470 A0A087X002 238 aa5.46□□□□□ -1.53
CALD1-220ENST00000482470 KRTAP29-1A8MX34 341 aaPredicted RBP5.46□□□□□ -1.53
CALD1-220ENST00000482470 NOTCH2NLQ7Z3S9 236 aa5.46□□□□□ -1.53
CALD1-220ENST00000482470 C7orf65Q6ZTY9 151 aa5.46□□□□□ -1.54
CALD1-220ENST00000482470 ADM2Q7Z4H4 148 aa5.46□□□□□ -1.54
CALD1-220ENST00000482470 ATP11AUNQ6ZP68 121 aa5.45□□□□□ -1.54
CALD1-220ENST00000482470 Q8N9P0 234 aaPredicted RBP5.45□□□□□ -1.54
CALD1-220ENST00000482470 Q96NJ1 140 aa5.45□□□□□ -1.54
CALD1-220ENST00000482470 DMBT1Q9UGM3 2413 aaPredicted RBP5.44□□□□□ -1.54
CALD1-220ENST00000482470 KRTAP10-1P60331 282 aa5.44□□□□□ -1.54
CALD1-220ENST00000482470 KRTAP13-1Q8IUC0 172 aa5.43□□□□□ -1.54
CALD1-220ENST00000482470 LOC101927531A0A1B0GV80 90 aa5.43□□□□□ -1.54
CALD1-220ENST00000482470 ZCCHC13Q8WW36 166 aaKnown RBP5.42□□□□□ -1.54
CALD1-220ENST00000482470 A0A1B0GU69 56 aa5.42□□□□□ -1.54
CALD1-220ENST00000482470 PRR26Q8N8Z3 221 aa5.42□□□□□ -1.54
CALD1-220ENST00000482470 CYP4F30PQ9H0H9 118 aa5.42□□□□□ -1.54
CALD1-220ENST00000482470 SPANXA2-OT1Q8N9U9 137 aa5.41□□□□□ -1.54
CALD1-220ENST00000482470 FAM229AH3BQW9 127 aa5.41□□□□□ -1.54
CALD1-220ENST00000482470 ACYP2P14621 99 aa5.41□□□□□ -1.54
CALD1-220ENST00000482470 LINC00483Q53H64 154 aa5.41□□□□□ -1.54
CALD1-220ENST00000482470 A6NN06 94 aa5.4□□□□□ -1.54
CALD1-220ENST00000482470 C9orf92A6NGG3 77 aa5.39□□□□□ -1.55
CALD1-220ENST00000482470 SPINK7P58062 85 aa5.39□□□□□ -1.55
CALD1-220ENST00000482470 MEGF8Q7Z7M0 2845 aa5.39□□□□□ -1.55
CALD1-220ENST00000482470 HUWE1Q7Z6Z7 4374 aaKnown RBP5.39□□□□□ -1.55
CALD1-220ENST00000482470 IGLV7-46A0A075B6I9 117 aa5.39□□□□□ -1.55
CALD1-220ENST00000482470 LCE6AA0A183 80 aa5.37□□□□□ -1.55
CALD1-220ENST00000482470 LINC00304Q8N9R0 145 aa5.37□□□□□ -1.55
CALD1-220ENST00000482470 ANK2Q01484 3957 aa5.37□□□□□ -1.55
CALD1-220ENST00000482470 FLG2Q5D862 2391 aaPredicted RBP5.37□□□□□ -1.55
CALD1-220ENST00000482470 K7ERS5 55 aa5.36□□□□□ -1.55
CALD1-220ENST00000482470 CDC42SE1Q9NRR8 79 aa5.36□□□□□ -1.55
CALD1-220ENST00000482470 Q5W150 140 aa5.35□□□□□ -1.55
CALD1-220ENST00000482470 LINC01554Q52M75 96 aa5.34□□□□□ -1.55
CALD1-220ENST00000482470 HRES1P13985 223 aa5.34□□□□□ -1.55
CALD1-220ENST00000482470 Q75L30 129 aa5.33□□□□□ -1.56
CALD1-220ENST00000482470 Q8N1X5 172 aa5.33□□□□□ -1.56
CALD1-220ENST00000482470 DNAH10Q8IVF4 4471 aa5.31□□□□□ -1.56
CALD1-220ENST00000482470 KRTAP13-2Q52LG2 175 aa5.3□□□□□ -1.56
CALD1-220ENST00000482470 CSAG1Q6PB30 78 aa5.25□□□□□ -1.57
CALD1-220ENST00000482470 UQCR11O14957 56 aa5.24□□□□□ -1.57
CALD1-220ENST00000482470 MIR22HGQ0VDD5 57 aa5.24□□□□□ -1.57
CALD1-220ENST00000482470 DNAH9Q9NYC9 4486 aa5.24□□□□□ -1.57
CALD1-220ENST00000482470 PLECQ15149 4684 aaKnown RBP5.23□□□□□ -1.57
CALD1-220ENST00000482470 LINC01558Q9Y6Z2 57 aa5.21□□□□□ -1.57
CALD1-220ENST00000482470 LYSTQ99698 3801 aa5.2□□□□□ -1.58
CALD1-220ENST00000482470 ASB16-AS1Q495Z4 193 aa5.16□□□□□ -1.58
CALD1-220ENST00000482470 Q6ZSA8 131 aa5.16□□□□□ -1.58
CALD1-220ENST00000482470 KRTAP1-4P0C5Y4 121 aa5.16□□□□□ -1.58
CALD1-220ENST00000482470 DMAC1Q96GE9 116 aa5.15□□□□□ -1.58
CALD1-220ENST00000482470 CRIPTQ9P021 101 aa5.14□□□□□ -1.59
CALD1-220ENST00000482470 CMYA5Q8N3K9 4069 aa5.11□□□□□ -1.59
CALD1-220ENST00000482470 A0A0D9SG42 100 aa5.11□□□□□ -1.59
CALD1-220ENST00000482470 STARD9Q9P2P6 4700 aa5.11□□□□□ -1.59
CALD1-220ENST00000482470 PRKDCP78527 4128 aaKnown RBP5.11□□□□□ -1.59
CALD1-220ENST00000482470 DNAH1Q9P2D7 4330 aa5.1□□□□□ -1.59
CALD1-220ENST00000482470 SPINT4Q6UDR6 99 aa5.1□□□□□ -1.59
CALD1-220ENST00000482470 DNHD1Q96M86 4753 aa5.09□□□□□ -1.59
CALD1-220ENST00000482470 Q5VSD8 79 aa5.06□□□□□ -1.6
CALD1-220ENST00000482470 DNAH11Q96DT5 4516 aa5.06□□□□□ -1.6
CALD1-220ENST00000482470 KMT2AQ03164 3969 aa5.06□□□□□ -1.6
CALD1-220ENST00000482470 DNAH7Q8WXX0 4024 aa5.04□□□□□ -1.6
CALD1-220ENST00000482470 DNAH3Q8TD57 4116 aa5.04□□□□□ -1.6
CALD1-220ENST00000482470 KRTAP16-1A8MUX0 517 aa5.03□□□□□ -1.6
CALD1-220ENST00000482470 KRTAP13-3Q3SY46 172 aa5.02□□□□□ -1.61
CALD1-220ENST00000482470 A0A1B0GU33 70 aa5.01□□□□□ -1.61
CALD1-220ENST00000482470 VPS13DQ5THJ4 4388 aa5□□□□□ -1.61
CALD1-220ENST00000482470 ROMO1P60602 79 aa4.97□□□□□ -1.61
CALD1-220ENST00000482470 KRTAP21-3Q3LHN1 58 aa4.97□□□□□ -1.61
CALD1-220ENST00000482470 RPS29P62273 56 aaKnown RBP4.96□□□□□ -1.62
CALD1-220ENST00000482470 SPATA8Q6RVD6 105 aa4.95□□□□□ -1.62
CALD1-220ENST00000482470 FRAS1Q86XX4 4008 aa4.94□□□□□ -1.62
CALD1-220ENST00000482470 DNAH8Q96JB1 4490 aa4.94□□□□□ -1.62
CALD1-220ENST00000482470 LRP1BQ9NZR2 4599 aa4.93□□□□□ -1.62
CALD1-220ENST00000482470 J3QL48 77 aa4.93□□□□□ -1.62
CALD1-220ENST00000482470 COX6B2Q6YFQ2 88 aa4.93□□□□□ -1.62
CALD1-220ENST00000482470 A8MUU9 505 aa4.93□□□□□ -1.62
CALD1-220ENST00000482470 C20orf166-AS1Q96NR2 134 aa4.91□□□□□ -1.62
CALD1-220ENST00000482470 DNAH17Q9UFH2 4485 aa4.91□□□□□ -1.62
CALD1-220ENST00000482470 A0A0A0MQY5 61 aa4.91□□□□□ -1.62
CALD1-220ENST00000482470 DNAH5Q8TE73 4624 aa4.9□□□□□ -1.62
CALD1-220ENST00000482470 DNAH2Q9P225 4427 aa4.9□□□□□ -1.63
CALD1-220ENST00000482470 FAT1Q14517 4588 aa4.89□□□□□ -1.63
CALD1-220ENST00000482470 A0A1B0GVY2 172 aa4.89□□□□□ -1.63
CALD1-220ENST00000482470 DNAH6Q9C0G6 4158 aa4.88□□□□□ -1.63
CALD1-220ENST00000482470 S4R3F8 94 aa4.88□□□□□ -1.63
CALD1-220ENST00000482470 KRTAP25-1Q3LHN0 102 aa4.87□□□□□ -1.63
CALD1-220ENST00000482470 H1FX-AS1Q4G0G2 97 aa4.87□□□□□ -1.63
CALD1-220ENST00000482470 NDUFAF8A1L188 74 aa4.87□□□□□ -1.63
CALD1-220ENST00000482470 P0C880 135 aa4.85□□□□□ -1.63
CALD1-220ENST00000482470 HECTD4Q9Y4D8 3996 aa4.83□□□□□ -1.64
CALD1-220ENST00000482470 DYNC2H1Q8NCM8 4307 aaKnown RBP4.82□□□□□ -1.64
CALD1-220ENST00000482470 RPL37P61927 97 aaKnown RBP4.82□□□□□ -1.64
CALD1-220ENST00000482470 XP32Q5T750 250 aa4.8□□□□□ -1.64
CALD1-220ENST00000482470 VPS13BQ7Z7G8 4022 aa4.78□□□□□ -1.64
CALD1-220ENST00000482470 HYDINQ4G0P3 5121 aa4.78□□□□□ -1.64
CALD1-220ENST00000482470 KRTAP3-1Q9BYR8 98 aa4.78□□□□□ -1.65
CALD1-220ENST00000482470 DYNC1H1Q14204 4646 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms