RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 C9orf92A6NGG3 77 aa6.9□□□□□ -1.31
SMPD4-218ENST00000482171 KRTAP4-16G5E9R7 235 aaPredicted RBP6.9□□□□□ -1.31
SMPD4-218ENST00000482171 PLAC8Q9NZF1 115 aa6.9□□□□□ -1.31
SMPD4-218ENST00000482171 MMP24-AS1A0A0U1RRL7 71 aa6.89□□□□□ -1.31
SMPD4-218ENST00000482171 PRAC1Q96KF2 57 aa6.89□□□□□ -1.31
SMPD4-218ENST00000482171 FLG2Q5D862 2391 aaPredicted RBP6.87□□□□□ -1.31
SMPD4-218ENST00000482171 SPINK7P58062 85 aa6.87□□□□□ -1.31
SMPD4-218ENST00000482171 ZCCHC13Q8WW36 166 aaKnown RBP6.86□□□□□ -1.31
SMPD4-218ENST00000482171 LINC01558Q9Y6Z2 57 aa6.86□□□□□ -1.31
SMPD4-218ENST00000482171 KRTAP11-1Q8IUC1 163 aa6.86□□□□□ -1.31
SMPD4-218ENST00000482171 KRTAP10-1P60331 282 aa6.85□□□□□ -1.31
SMPD4-218ENST00000482171 KRTAP7-1Q8IUC3 87 aa6.85□□□□□ -1.31
SMPD4-218ENST00000482171 LINC00472Q9H8W2 130 aa6.85□□□□□ -1.31
SMPD4-218ENST00000482171 TRRAPQ9Y4A5 3859 aa6.84□□□□□ -1.31
SMPD4-218ENST00000482171 HRES1P13985 223 aa6.84□□□□□ -1.31
SMPD4-218ENST00000482171 SPRR1BP22528 89 aa6.84□□□□□ -1.31
SMPD4-218ENST00000482171 Q6ZR54 194 aa6.84□□□□□ -1.31
SMPD4-218ENST00000482171 A8MU10 97 aa6.84□□□□□ -1.32
SMPD4-218ENST00000482171 VPS13CQ709C8 3753 aa6.83□□□□□ -1.32
SMPD4-218ENST00000482171 Q6ZRN7 208 aaPredicted RBP6.81□□□□□ -1.32
SMPD4-218ENST00000482171 KRTAP29-1A8MX34 341 aaPredicted RBP6.78□□□□□ -1.32
SMPD4-218ENST00000482171 Q8N1X5 172 aa6.77□□□□□ -1.33
SMPD4-218ENST00000482171 LINC01554Q52M75 96 aa6.77□□□□□ -1.33
SMPD4-218ENST00000482171 LCE6AA0A183 80 aa6.74□□□□□ -1.33
SMPD4-218ENST00000482171 SPINT4Q6UDR6 99 aa6.74□□□□□ -1.33
SMPD4-218ENST00000482171 ANK3Q12955 4377 aaKnown RBP6.73□□□□□ -1.33
SMPD4-218ENST00000482171 J3QL48 77 aa6.72□□□□□ -1.33
SMPD4-218ENST00000482171 H3BS24 57 aa6.69□□□□□ -1.34
SMPD4-218ENST00000482171 A0A087X002 238 aa6.69□□□□□ -1.34
SMPD4-218ENST00000482171 CSAG1Q6PB30 78 aa6.68□□□□□ -1.34
SMPD4-218ENST00000482171 ZNF469Q96JG9 3925 aaPredicted RBP6.68□□□□□ -1.34
SMPD4-218ENST00000482171 SRRM2Q9UQ35 2752 aaKnown RBP6.66□□□□□ -1.34
SMPD4-218ENST00000482171 Q5W150 140 aa6.65□□□□□ -1.34
SMPD4-218ENST00000482171 A6NN06 94 aa6.64□□□□□ -1.35
SMPD4-218ENST00000482171 LINC00483Q53H64 154 aa6.64□□□□□ -1.35
SMPD4-218ENST00000482171 NOTCH2NLQ7Z3S9 236 aa6.63□□□□□ -1.35
SMPD4-218ENST00000482171 A0A0D9SG42 100 aa6.59□□□□□ -1.35
SMPD4-218ENST00000482171 Q5VSD8 79 aa6.59□□□□□ -1.36
SMPD4-218ENST00000482171 ADM2Q7Z4H4 148 aa6.58□□□□□ -1.36
SMPD4-218ENST00000482171 A0A1B0GU33 70 aa6.58□□□□□ -1.36
SMPD4-218ENST00000482171 KRTAP13-1Q8IUC0 172 aa6.58□□□□□ -1.36
SMPD4-218ENST00000482171 CRIPTQ9P021 101 aa6.58□□□□□ -1.36
SMPD4-218ENST00000482171 DMAC1Q96GE9 116 aa6.56□□□□□ -1.36
SMPD4-218ENST00000482171 FBN3Q75N90 2809 aa6.54□□□□□ -1.36
SMPD4-218ENST00000482171 KRTAP13-2Q52LG2 175 aa6.52□□□□□ -1.37
SMPD4-218ENST00000482171 KRTAP21-3Q3LHN1 58 aa6.5□□□□□ -1.37
SMPD4-218ENST00000482171 COX6B2Q6YFQ2 88 aa6.49□□□□□ -1.37
SMPD4-218ENST00000482171 SPATA8Q6RVD6 105 aa6.48□□□□□ -1.37
SMPD4-218ENST00000482171 COL7A1Q02388 2944 aa6.46□□□□□ -1.37
SMPD4-218ENST00000482171 Q6ZSA8 131 aa6.44□□□□□ -1.38
SMPD4-218ENST00000482171 ASB16-AS1Q495Z4 193 aa6.41□□□□□ -1.38
SMPD4-218ENST00000482171 MEGF8Q7Z7M0 2845 aa6.41□□□□□ -1.38
SMPD4-218ENST00000482171 AKAP9Q99996 3911 aa6.34□□□□□ -1.39
SMPD4-218ENST00000482171 H1FX-AS1Q4G0G2 97 aa6.33□□□□□ -1.4
SMPD4-218ENST00000482171 KRTAP1-4P0C5Y4 121 aa6.32□□□□□ -1.4
SMPD4-218ENST00000482171 RPL37P61927 97 aaKnown RBP6.28□□□□□ -1.4
SMPD4-218ENST00000482171 KRTAP25-1Q3LHN0 102 aa6.28□□□□□ -1.4
SMPD4-218ENST00000482171 CSMD3Q7Z407 3707 aa6.28□□□□□ -1.4
SMPD4-218ENST00000482171 ROMO1P60602 79 aa6.28□□□□□ -1.4
SMPD4-218ENST00000482171 S4R3F8 94 aa6.23□□□□□ -1.41
SMPD4-218ENST00000482171 RPS29P62273 56 aaKnown RBP6.22□□□□□ -1.41
SMPD4-218ENST00000482171 SEC61BP60468 96 aaKnown RBP6.18□□□□□ -1.42
SMPD4-218ENST00000482171 HUWE1Q7Z6Z7 4374 aaKnown RBP6.16□□□□□ -1.42
SMPD4-218ENST00000482171 LUZP6Q538Z0 58 aa6.16□□□□□ -1.42
SMPD4-218ENST00000482171 M0R2T5 61 aa6.15□□□□□ -1.42
SMPD4-218ENST00000482171 A8MUU9 505 aa6.13□□□□□ -1.43
SMPD4-218ENST00000482171 NDUFAF8A1L188 74 aa6.1□□□□□ -1.43
SMPD4-218ENST00000482171 A0A1B0GVY2 172 aa6.08□□□□□ -1.44
SMPD4-218ENST00000482171 H0YAA0 97 aa6.08□□□□□ -1.44
SMPD4-218ENST00000482171 KRTAP13-3Q3SY46 172 aa6.07□□□□□ -1.44
SMPD4-218ENST00000482171 C20orf166-AS1Q96NR2 134 aa6.07□□□□□ -1.44
SMPD4-218ENST00000482171 KRTAP16-1A8MUX0 517 aa6.07□□□□□ -1.44
SMPD4-218ENST00000482171 CAMK2N1Q7Z7J9 78 aa6.06□□□□□ -1.44
SMPD4-218ENST00000482171 R4GN34 69 aa6.06□□□□□ -1.44
SMPD4-218ENST00000482171 DNHD1Q96M86 4753 aa6.04□□□□□ -1.44
SMPD4-218ENST00000482171 XP32Q5T750 250 aa6.01□□□□□ -1.45
SMPD4-218ENST00000482171 DNAH9Q9NYC9 4486 aa6□□□□□ -1.45
SMPD4-218ENST00000482171 M0QZ58 72 aa5.99□□□□□ -1.45
SMPD4-218ENST00000482171 C10orf95Q9H7T3 257 aa5.99□□□□□ -1.45
SMPD4-218ENST00000482171 A0A0A0MQY5 61 aa5.94□□□□□ -1.46
SMPD4-218ENST00000482171 PLECQ15149 4684 aaKnown RBP5.93□□□□□ -1.46
SMPD4-218ENST00000482171 KRTAP10-8P60410 259 aa5.92□□□□□ -1.46
SMPD4-218ENST00000482171 DNAH10Q8IVF4 4471 aa5.86□□□□□ -1.47
SMPD4-218ENST00000482171 TPRXLQ17RH7 258 aa5.83□□□□□ -1.48
SMPD4-218ENST00000482171 DNAH11Q96DT5 4516 aa5.81□□□□□ -1.48
SMPD4-218ENST00000482171 PRKDCP78527 4128 aaKnown RBP5.8□□□□□ -1.48
SMPD4-218ENST00000482171 DNAH1Q9P2D7 4330 aa5.78□□□□□ -1.48
SMPD4-218ENST00000482171 STARD9Q9P2P6 4700 aa5.78□□□□□ -1.48
SMPD4-218ENST00000482171 P0C880 135 aa5.77□□□□□ -1.49
SMPD4-218ENST00000482171 DNAH5Q8TE73 4624 aa5.75□□□□□ -1.49
SMPD4-218ENST00000482171 ANK2Q01484 3957 aa5.73□□□□□ -1.49
SMPD4-218ENST00000482171 KRTAP10-4P60372 401 aaPredicted RBP5.69□□□□□ -1.5
SMPD4-218ENST00000482171 KRTAP3-1Q9BYR8 98 aa5.69□□□□□ -1.5
SMPD4-218ENST00000482171 VPS13DQ5THJ4 4388 aa5.68□□□□□ -1.5
SMPD4-218ENST00000482171 PLAC4Q8WY50 150 aa5.67□□□□□ -1.5
SMPD4-218ENST00000482171 FAT1Q14517 4588 aa5.66□□□□□ -1.5
SMPD4-218ENST00000482171 KRTAP4-5Q9BYR2 181 aa5.66□□□□□ -1.5
SMPD4-218ENST00000482171 MT1HL1P0DM35 61 aa5.65□□□□□ -1.51
SMPD4-218ENST00000482171 KMT2AQ03164 3969 aa5.63□□□□□ -1.51
SMPD4-218ENST00000482171 KRTAP12-2P59991 146 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms