RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 MEIG1Q5JSS6 88 aa0.64□□□□□ -2.31
USH2A-204ENST00000481786 TOMM6Q96B49 74 aa0.64□□□□□ -2.31
USH2A-204ENST00000481786 SIGMAR1Q99720 223 aa0.64□□□□□ -2.31
USH2A-204ENST00000481786 MIEN1Q9BRT3 115 aa0.64□□□□□ -2.31
USH2A-204ENST00000481786 GNG13Q9P2W3 67 aa0.64□□□□□ -2.31
USH2A-204ENST00000481786 NAT8BQ9UHF3 227 aa0.64□□□□□ -2.31
USH2A-204ENST00000481786 LAMTOR2Q9Y2Q5 125 aa0.64□□□□□ -2.31
USH2A-204ENST00000481786 TRBV7-6A0A0J9YX20 115 aa0.63□□□□□ -2.31
USH2A-204ENST00000481786 A0A1B0GV50 99 aa0.63□□□□□ -2.31
USH2A-204ENST00000481786 PLA2G10O15496 165 aa0.63□□□□□ -2.31
USH2A-204ENST00000481786 LYRM1O43325 122 aa0.63□□□□□ -2.31
USH2A-204ENST00000481786 S100A8P05109 93 aa0.63□□□□□ -2.31
USH2A-204ENST00000481786 IGLC3P0DOY3 106 aa0.63□□□□□ -2.31
USH2A-204ENST00000481786 ZNF22P17026 224 aaPredicted RBP0.63□□□□□ -2.31
USH2A-204ENST00000481786 RHEBQ15382 184 aa0.63□□□□□ -2.31
USH2A-204ENST00000481786 OCIAD2Q56VL3 154 aa0.63□□□□□ -2.31
USH2A-204ENST00000481786 MRPL54Q6P161 138 aaKnown RBP0.63□□□□□ -2.31
USH2A-204ENST00000481786 Q8N8P6 123 aa0.63□□□□□ -2.31
USH2A-204ENST00000481786 FAM213BQ8TBF2 198 aa0.63□□□□□ -2.31
USH2A-204ENST00000481786 PRELID3AQ96N28 172 aa0.63□□□□□ -2.31
USH2A-204ENST00000481786 SCGB3A1Q96QR1 104 aa0.63□□□□□ -2.31
USH2A-204ENST00000481786 MAP1LC3AQ9H492 121 aa0.63□□□□□ -2.31
USH2A-204ENST00000481786 IGKV3D-7A0A0C4DH55 119 aa0.62□□□□□ -2.31
USH2A-204ENST00000481786 TMEM250H0YL14 139 aa0.62□□□□□ -2.31
USH2A-204ENST00000481786 K7EQZ3 153 aa0.62□□□□□ -2.31
USH2A-204ENST00000481786 IL7P13232 177 aa0.62□□□□□ -2.31
USH2A-204ENST00000481786 ADCYAP1P18509 176 aa0.62□□□□□ -2.31
USH2A-204ENST00000481786 LYRM7Q5U5X0 104 aa0.62□□□□□ -2.31
USH2A-204ENST00000481786 S4R3F8 94 aa0.62□□□□□ -2.31
USH2A-204ENST00000481786 IGHV6-1A0A0B4J1U7 121 aa0.61□□□□□ -2.31
USH2A-204ENST00000481786 MYMXA0A1B0GTQ4 84 aa0.61□□□□□ -2.31
USH2A-204ENST00000481786 C8orf87E5RJ46 101 aa0.61□□□□□ -2.31
USH2A-204ENST00000481786 H0Y8G0 127 aa0.61□□□□□ -2.31
USH2A-204ENST00000481786 H3BQ85 93 aa0.61□□□□□ -2.31
USH2A-204ENST00000481786 TEX46H3BTG2 121 aa0.61□□□□□ -2.31
USH2A-204ENST00000481786 PSPHP1O15172 72 aa0.61□□□□□ -2.31
USH2A-204ENST00000481786 SSNA1O43805 119 aa0.61□□□□□ -2.31
USH2A-204ENST00000481786 HBDP02042 147 aa0.61□□□□□ -2.31
USH2A-204ENST00000481786 IFITM2Q01629 132 aa0.61□□□□□ -2.31
USH2A-204ENST00000481786 TMEM170BQ5T4T1 132 aa0.61□□□□□ -2.31
USH2A-204ENST00000481786 TEN1Q86WV5 123 aa0.61□□□□□ -2.31
USH2A-204ENST00000481786 OR13C6PQ8NH95 151 aa0.61□□□□□ -2.31
USH2A-204ENST00000481786 MT1LQ93083 61 aa0.61□□□□□ -2.31
USH2A-204ENST00000481786 SPANXDQ9BXN6 97 aa0.61□□□□□ -2.31
USH2A-204ENST00000481786 OSTCQ9NRP0 149 aa0.61□□□□□ -2.31
USH2A-204ENST00000481786 A0A1B0GXF2 115 aa0.6□□□□□ -2.31
USH2A-204ENST00000481786 SMIM27A0A1W2PRY6 76 aa0.6□□□□□ -2.31
USH2A-204ENST00000481786 CEBPGP53567 150 aa0.6□□□□□ -2.31
USH2A-204ENST00000481786 C4orf26Q17RF5 130 aa0.6□□□□□ -2.31
USH2A-204ENST00000481786 SLC7A5P1Q8MH63 180 aa0.6□□□□□ -2.31
USH2A-204ENST00000481786 RAB37Q96AX2 223 aa0.6□□□□□ -2.31
USH2A-204ENST00000481786 V9GYV3 84 aa0.6□□□□□ -2.31
USH2A-204ENST00000481786 C11orf86A6NJI1 115 aa0.59□□□□□ -2.31
USH2A-204ENST00000481786 C9JQL5 133 aa0.59□□□□□ -2.31
USH2A-204ENST00000481786 C2orf91Q6ZV80 131 aa0.59□□□□□ -2.31
USH2A-204ENST00000481786 PPDPFLQ8WWR9 84 aa0.59□□□□□ -2.31
USH2A-204ENST00000481786 SPANXCQ9NY87 97 aa0.59□□□□□ -2.31
USH2A-204ENST00000481786 LINC01546A6NGU7 62 aa0.58□□□□□ -2.32
USH2A-204ENST00000481786 PHGR1C9JFL3 82 aa0.58□□□□□ -2.32
USH2A-204ENST00000481786 H3BUT2 72 aa0.58□□□□□ -2.32
USH2A-204ENST00000481786 KRTAP19-5Q3LI72 72 aa0.58□□□□□ -2.32
USH2A-204ENST00000481786 C7orf65Q6ZTY9 151 aa0.58□□□□□ -2.32
USH2A-204ENST00000481786 ATP5L2Q7Z4Y8 100 aa0.58□□□□□ -2.32
USH2A-204ENST00000481786 BAGE3Q86Y29 109 aa0.58□□□□□ -2.32
USH2A-204ENST00000481786 SNHG12Q9BXW3 62 aa0.58□□□□□ -2.32
USH2A-204ENST00000481786 NAT8Q9UHE5 227 aa0.58□□□□□ -2.32
USH2A-204ENST00000481786 LEPROTO15243 131 aa0.57□□□□□ -2.32
USH2A-204ENST00000481786 ARPC5O15511 151 aa0.57□□□□□ -2.32
USH2A-204ENST00000481786 NPC2P61916 151 aa0.57□□□□□ -2.32
USH2A-204ENST00000481786 Q6ZQY7 126 aa0.57□□□□□ -2.32
USH2A-204ENST00000481786 SMIM7Q9BQ49 75 aa0.57□□□□□ -2.32
USH2A-204ENST00000481786 LINC00472Q9H8W2 130 aa0.57□□□□□ -2.32
USH2A-204ENST00000481786 hADV29S1A0JD25 119 aa0.56□□□□□ -2.32
USH2A-204ENST00000481786 VAMP3Q15836 100 aa0.56□□□□□ -2.32
USH2A-204ENST00000481786 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.56□□□□□ -2.32
USH2A-204ENST00000481786 LINC00575Q6W349 94 aa0.56□□□□□ -2.32
USH2A-204ENST00000481786 TRBV7-4A0A0J9YYF1 115 aa0.55□□□□□ -2.32
USH2A-204ENST00000481786 A0A1B0GU33 70 aa0.55□□□□□ -2.32
USH2A-204ENST00000481786 KANTRA0A1W2PQU2 76 aa0.55□□□□□ -2.32
USH2A-204ENST00000481786 hDV103S1A0JD37 113 aa0.55□□□□□ -2.32
USH2A-204ENST00000481786 J3KT08 172 aa0.55□□□□□ -2.32
USH2A-204ENST00000481786 J3QQQ9 107 aa0.55□□□□□ -2.32
USH2A-204ENST00000481786 TSPEAR-AS2P59090 65 aa0.55□□□□□ -2.32
USH2A-204ENST00000481786 KRTAP6-2Q3LI66 62 aa0.55□□□□□ -2.32
USH2A-204ENST00000481786 LINC00308Q8TCZ7 52 aa0.55□□□□□ -2.32
USH2A-204ENST00000481786 SMCO4Q9NRQ5 59 aa0.55□□□□□ -2.32
USH2A-204ENST00000481786 TRAPPC1Q9Y5R8 145 aa0.55□□□□□ -2.32
USH2A-204ENST00000481786 TRAV12-1A0A0B4J245 112 aa0.54□□□□□ -2.32
USH2A-204ENST00000481786 M0QZ58 72 aa0.54□□□□□ -2.32
USH2A-204ENST00000481786 NDUFB1O75438 58 aa0.54□□□□□ -2.32
USH2A-204ENST00000481786 ADIRFQ15847 76 aa0.54□□□□□ -2.32
USH2A-204ENST00000481786 LINC01554Q52M75 96 aa0.54□□□□□ -2.32
USH2A-204ENST00000481786 TCTE3Q8IZS6 198 aa0.54□□□□□ -2.32
USH2A-204ENST00000481786 C12orf57Q99622 126 aa0.54□□□□□ -2.32
USH2A-204ENST00000481786 BATF3Q9NR55 127 aa0.54□□□□□ -2.32
USH2A-204ENST00000481786 A0A0B4J2C4 111 aa0.53□□□□□ -2.32
USH2A-204ENST00000481786 H3BMG7 143 aa0.53□□□□□ -2.32
USH2A-204ENST00000481786 TIMM17BO60830 172 aa0.53□□□□□ -2.32
USH2A-204ENST00000481786 TRGC2P03986 189 aa0.53□□□□□ -2.32
USH2A-204ENST00000481786 C20orf197Q8N268 126 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms