RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 DNAH3Q8TD57 4116 aa6.25□□□□□ -1.41
SIK3-210ENST00000480468 FLNBO75369 2602 aaKnown RBP6.24□□□□□ -1.41
SIK3-210ENST00000480468 FAM229AH3BQW9 127 aa6.23□□□□□ -1.41
SIK3-210ENST00000480468 LYSTQ99698 3801 aa6.22□□□□□ -1.41
SIK3-210ENST00000480468 HECTD1Q9ULT8 2610 aa6.22□□□□□ -1.41
SIK3-210ENST00000480468 IGKV2-30P06310 120 aa6.22□□□□□ -1.41
SIK3-210ENST00000480468 MAST4O15021 2626 aa6.21□□□□□ -1.41
SIK3-210ENST00000480468 PANO1I0J062 215 aa6.21□□□□□ -1.42
SIK3-210ENST00000480468 FBN1P35555 2871 aaKnown RBP6.21□□□□□ -1.42
SIK3-210ENST00000480468 ZNF861PO60384 105 aa6.21□□□□□ -1.42
SIK3-210ENST00000480468 SPACA4Q8TDM5 124 aa6.19□□□□□ -1.42
SIK3-210ENST00000480468 CMYA5Q8N3K9 4069 aa6.18□□□□□ -1.42
SIK3-210ENST00000480468 SPINK6Q6UWN8 80 aa6.18□□□□□ -1.42
SIK3-210ENST00000480468 IGLV7-43P04211 117 aa6.17□□□□□ -1.42
SIK3-210ENST00000480468 DNAH9Q9NYC9 4486 aa6.16□□□□□ -1.42
SIK3-210ENST00000480468 IGLV5-52A0A0A0MRZ9 124 aa6.15□□□□□ -1.43
SIK3-210ENST00000480468 CSMD3Q7Z407 3707 aa6.14□□□□□ -1.43
SIK3-210ENST00000480468 UBE2DNLQ8IWF7 75 aa6.14□□□□□ -1.43
SIK3-210ENST00000480468 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.14□□□□□ -1.43
SIK3-210ENST00000480468 HUWE1Q7Z6Z7 4374 aaKnown RBP6.14□□□□□ -1.43
SIK3-210ENST00000480468 PSORS1C2Q9UIG4 136 aa6.13□□□□□ -1.43
SIK3-210ENST00000480468 ANAPC11Q9NYG5 84 aa6.13□□□□□ -1.43
SIK3-210ENST00000480468 COL7A1Q02388 2944 aa6.12□□□□□ -1.43
SIK3-210ENST00000480468 DNAH8Q96JB1 4490 aa6.1□□□□□ -1.43
SIK3-210ENST00000480468 IGKV2D-30A0A075B6S6 120 aa6.1□□□□□ -1.43
SIK3-210ENST00000480468 Q6ZRN7 208 aaPredicted RBP6.1□□□□□ -1.43
SIK3-210ENST00000480468 APLNQ9ULZ1 77 aa6.1□□□□□ -1.43
SIK3-210ENST00000480468 C1orf134Q5TEV5 83 aa6.1□□□□□ -1.43
SIK3-210ENST00000480468 NBEAL1Q6ZS30 2694 aa6.09□□□□□ -1.43
SIK3-210ENST00000480468 SSBP3-AS1Q7Z2R9 100 aa6.09□□□□□ -1.43
SIK3-210ENST00000480468 J3QKU1 62 aa6.09□□□□□ -1.44
SIK3-210ENST00000480468 KRTAP25-1Q3LHN0 102 aa6.09□□□□□ -1.44
SIK3-210ENST00000480468 NOTCH1P46531 2555 aa6.08□□□□□ -1.44
SIK3-210ENST00000480468 A8MUU9 505 aa6.07□□□□□ -1.44
SIK3-210ENST00000480468 DYNC2H1Q8NCM8 4307 aaKnown RBP6.07□□□□□ -1.44
SIK3-210ENST00000480468 NBDYA0A0U1RRE5 68 aa6.07□□□□□ -1.44
SIK3-210ENST00000480468 LY6G6CO95867 125 aa6.07□□□□□ -1.44
SIK3-210ENST00000480468 CIRBP-AS1Q8TBR5 109 aa6.07□□□□□ -1.44
SIK3-210ENST00000480468 KRTAP16-1A8MUX0 517 aa6.06□□□□□ -1.44
SIK3-210ENST00000480468 COL6A5A8TX70 2615 aa6.06□□□□□ -1.44
SIK3-210ENST00000480468 ROMO1P60602 79 aa6.05□□□□□ -1.44
SIK3-210ENST00000480468 KRTAP3-3Q9BYR6 98 aa6.05□□□□□ -1.44
SIK3-210ENST00000480468 KRTAP3-2Q9BYR7 98 aa6.05□□□□□ -1.44
SIK3-210ENST00000480468 STAB2Q8WWQ8 2551 aa6.02□□□□□ -1.45
SIK3-210ENST00000480468 STAB1Q9NY15 2570 aa6.02□□□□□ -1.45
SIK3-210ENST00000480468 H0YAA0 97 aa6.01□□□□□ -1.45
SIK3-210ENST00000480468 LINC00304Q8N9R0 145 aa6.01□□□□□ -1.45
SIK3-210ENST00000480468 KRTAP24-1Q3LI83 254 aa6□□□□□ -1.45
SIK3-210ENST00000480468 Q6ZSA8 131 aa6□□□□□ -1.45
SIK3-210ENST00000480468 HECTD4Q9Y4D8 3996 aa5.99□□□□□ -1.45
SIK3-210ENST00000480468 A0A087WTM6 91 aa5.99□□□□□ -1.45
SIK3-210ENST00000480468 FRAS1Q86XX4 4008 aa5.98□□□□□ -1.45
SIK3-210ENST00000480468 SPINK1P00995 79 aa5.95□□□□□ -1.46
SIK3-210ENST00000480468 DNAH7Q8WXX0 4024 aa5.94□□□□□ -1.46
SIK3-210ENST00000480468 DNAH17Q9UFH2 4485 aa5.94□□□□□ -1.46
SIK3-210ENST00000480468 MEGF8Q7Z7M0 2845 aa5.94□□□□□ -1.46
SIK3-210ENST00000480468 PLECQ15149 4684 aaKnown RBP5.93□□□□□ -1.46
SIK3-210ENST00000480468 A0A1B0GU33 70 aa5.92□□□□□ -1.46
SIK3-210ENST00000480468 VPS13DQ5THJ4 4388 aa5.91□□□□□ -1.46
SIK3-210ENST00000480468 H1FX-AS1Q4G0G2 97 aa5.9□□□□□ -1.47
SIK3-210ENST00000480468 Q8N1X5 172 aa5.9□□□□□ -1.47
SIK3-210ENST00000480468 NUPR2A6NF83 97 aa5.89□□□□□ -1.47
SIK3-210ENST00000480468 KRTAP13-2Q52LG2 175 aa5.89□□□□□ -1.47
SIK3-210ENST00000480468 TYMSOSQ8TAI1 123 aa5.88□□□□□ -1.47
SIK3-210ENST00000480468 TGP01266 2768 aa5.88□□□□□ -1.47
SIK3-210ENST00000480468 K7ERS5 55 aa5.86□□□□□ -1.47
SIK3-210ENST00000480468 P0C880 135 aa5.85□□□□□ -1.47
SIK3-210ENST00000480468 PRKDCP78527 4128 aaKnown RBP5.81□□□□□ -1.48
SIK3-210ENST00000480468 DNAH2Q9P225 4427 aa5.8□□□□□ -1.48
SIK3-210ENST00000480468 MGAM2Q2M2H8 2515 aa5.8□□□□□ -1.48
SIK3-210ENST00000480468 DNAH11Q96DT5 4516 aa5.77□□□□□ -1.49
SIK3-210ENST00000480468 KRTAP1-4P0C5Y4 121 aa5.76□□□□□ -1.49
SIK3-210ENST00000480468 KRTAP3-1Q9BYR8 98 aa5.76□□□□□ -1.49
SIK3-210ENST00000480468 FBN3Q75N90 2809 aa5.75□□□□□ -1.49
SIK3-210ENST00000480468 FLG2Q5D862 2391 aaPredicted RBP5.75□□□□□ -1.49
SIK3-210ENST00000480468 CRIPTQ9P021 101 aa5.75□□□□□ -1.49
SIK3-210ENST00000480468 DNAH6Q9C0G6 4158 aa5.74□□□□□ -1.49
SIK3-210ENST00000480468 COX6B2Q6YFQ2 88 aa5.74□□□□□ -1.49
SIK3-210ENST00000480468 STARD9Q9P2P6 4700 aa5.73□□□□□ -1.49
SIK3-210ENST00000480468 RPS29P62273 56 aaKnown RBP5.71□□□□□ -1.49
SIK3-210ENST00000480468 C20orf166-AS1Q96NR2 134 aa5.69□□□□□ -1.5
SIK3-210ENST00000480468 RPL37P61927 97 aaKnown RBP5.68□□□□□ -1.5
SIK3-210ENST00000480468 DNAH5Q8TE73 4624 aa5.68□□□□□ -1.5
SIK3-210ENST00000480468 SPINT4Q6UDR6 99 aa5.68□□□□□ -1.5
SIK3-210ENST00000480468 KMT2AQ03164 3969 aa5.67□□□□□ -1.5
SIK3-210ENST00000480468 TPRXLQ17RH7 258 aa5.66□□□□□ -1.5
SIK3-210ENST00000480468 KRTAP15-1Q3LI76 137 aa5.64□□□□□ -1.51
SIK3-210ENST00000480468 LRP1BQ9NZR2 4599 aa5.64□□□□□ -1.51
SIK3-210ENST00000480468 KRTAP10-2P60368 255 aa5.62□□□□□ -1.51
SIK3-210ENST00000480468 NDUFAF8A1L188 74 aa5.59□□□□□ -1.51
SIK3-210ENST00000480468 KRTAP10-6P60371 365 aaPredicted RBP5.59□□□□□ -1.52
SIK3-210ENST00000480468 KRTAP10-1P60331 282 aa5.58□□□□□ -1.52
SIK3-210ENST00000480468 VPS13BQ7Z7G8 4022 aa5.57□□□□□ -1.52
SIK3-210ENST00000480468 SACSQ9NZJ4 4579 aa5.56□□□□□ -1.52
SIK3-210ENST00000480468 KRTAP13-4Q3LI77 160 aa5.55□□□□□ -1.52
SIK3-210ENST00000480468 C9orf92A6NGG3 77 aa5.54□□□□□ -1.52
SIK3-210ENST00000480468 C10orf95Q9H7T3 257 aa5.52□□□□□ -1.53
SIK3-210ENST00000480468 PKD1P98161 4303 aa5.51□□□□□ -1.53
SIK3-210ENST00000480468 A0A0D9SG42 100 aa5.51□□□□□ -1.53
SIK3-210ENST00000480468 DNHD1Q96M86 4753 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms