RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 C9orf92A6NGG3 77 aa5.01□□□□□ -1.61
VCP-206ENST00000480327 RPS28P62857 69 aaKnown RBP5.01□□□□□ -1.61
VCP-206ENST00000480327 KRTAP13-3Q3SY46 172 aa5.01□□□□□ -1.61
VCP-206ENST00000480327 ASB16-AS1Q495Z4 193 aa5.01□□□□□ -1.61
VCP-206ENST00000480327 Q6ZQT0 140 aa5.01□□□□□ -1.61
VCP-206ENST00000480327 OBSCN-AS1Q96MR7 158 aa5.01□□□□□ -1.61
VCP-206ENST00000480327 LOC110117498A0A087WWA1 95 aa5□□□□□ -1.61
VCP-206ENST00000480327 J3KT08 172 aa5□□□□□ -1.61
VCP-206ENST00000480327 FAM240AA0A1B0GVK7 77 aa4.99□□□□□ -1.61
VCP-206ENST00000480327 DEFB116Q30KQ4 102 aa4.99□□□□□ -1.61
VCP-206ENST00000480327 IMUPQ9GZP8 106 aa4.99□□□□□ -1.61
VCP-206ENST00000480327 PDE6GP18545 87 aa4.98□□□□□ -1.61
VCP-206ENST00000480327 LCE2DQ5TA82 110 aaPredicted RBP4.98□□□□□ -1.61
VCP-206ENST00000480327 Q96NJ1 140 aa4.98□□□□□ -1.61
VCP-206ENST00000480327 IGKV4-1P06312 121 aa4.96□□□□□ -1.62
VCP-206ENST00000480327 LINC00472Q9H8W2 130 aa4.95□□□□□ -1.62
VCP-206ENST00000480327 UQCRQO14949 82 aa4.94□□□□□ -1.62
VCP-206ENST00000480327 ACYP1P07311 99 aa4.94□□□□□ -1.62
VCP-206ENST00000480327 XP32Q5T750 250 aa4.94□□□□□ -1.62
VCP-206ENST00000480327 LCE2CQ5TA81 110 aa4.94□□□□□ -1.62
VCP-206ENST00000480327 CRCT1Q9UGL9 99 aa4.93□□□□□ -1.62
VCP-206ENST00000480327 A0A1B0GW54 56 aa4.92□□□□□ -1.62
VCP-206ENST00000480327 NREPQ16612 68 aa4.92□□□□□ -1.62
VCP-206ENST00000480327 KRTAP19-2Q3LHN2 52 aa4.92□□□□□ -1.62
VCP-206ENST00000480327 DSCR10P59022 87 aa4.91□□□□□ -1.62
VCP-206ENST00000480327 IGHV6-1A0A0B4J1U7 121 aa4.9□□□□□ -1.63
VCP-206ENST00000480327 TMEM258P61165 79 aa4.89□□□□□ -1.63
VCP-206ENST00000480327 COX7CP15954 63 aa4.88□□□□□ -1.63
VCP-206ENST00000480327 A0A1B0GVX0 72 aa4.87□□□□□ -1.63
VCP-206ENST00000480327 ATOX1O00244 68 aa4.87□□□□□ -1.63
VCP-206ENST00000480327 LINC00313P59037 77 aa4.87□□□□□ -1.63
VCP-206ENST00000480327 NOTCH2NLQ7Z3S9 236 aa4.87□□□□□ -1.63
VCP-206ENST00000480327 LINC00643Q86TS7 51 aa4.87□□□□□ -1.63
VCP-206ENST00000480327 LINC00846Q9NV44 126 aa4.87□□□□□ -1.63
VCP-206ENST00000480327 SEC61BP60468 96 aaKnown RBP4.86□□□□□ -1.63
VCP-206ENST00000480327 PCOTHQ58A44 107 aa4.86□□□□□ -1.63
VCP-206ENST00000480327 Q6ZVQ6 151 aa4.86□□□□□ -1.63
VCP-206ENST00000480327 FAM236AA0A1B0GUQ0 79 aa4.85□□□□□ -1.63
VCP-206ENST00000480327 FAM236BA0A1B0GV22 79 aa4.85□□□□□ -1.63
VCP-206ENST00000480327 NDUFB1O75438 58 aa4.85□□□□□ -1.63
VCP-206ENST00000480327 RPL37P61927 97 aaKnown RBP4.85□□□□□ -1.63
VCP-206ENST00000480327 MT1HP80294 61 aa4.85□□□□□ -1.63
VCP-206ENST00000480327 IGKV3D-7A0A0C4DH55 119 aa4.84□□□□□ -1.63
VCP-206ENST00000480327 A8MWP4 228 aa4.84□□□□□ -1.63
VCP-206ENST00000480327 BPY2O14599 106 aa4.84□□□□□ -1.63
VCP-206ENST00000480327 UBL5Q9BZL1 73 aa4.84□□□□□ -1.63
VCP-206ENST00000480327 FLGP20930 4061 aaPredicted RBP4.83□□□□□ -1.64
VCP-206ENST00000480327 C8orf87E5RJ46 101 aa4.83□□□□□ -1.64
VCP-206ENST00000480327 HIST1H4AP62805 103 aaKnown RBP4.83□□□□□ -1.64
VCP-206ENST00000480327 KRTAP16-1A8MUX0 517 aa4.82□□□□□ -1.64
VCP-206ENST00000480327 K7EQZ3 153 aa4.82□□□□□ -1.64
VCP-206ENST00000480327 Q8N9L7 120 aa4.82□□□□□ -1.64
VCP-206ENST00000480327 Q75L30 129 aa4.81□□□□□ -1.64
VCP-206ENST00000480327 PRR15Q8IV56 129 aa4.81□□□□□ -1.64
VCP-206ENST00000480327 C20orf166-AS1Q96NR2 134 aa4.81□□□□□ -1.64
VCP-206ENST00000480327 C8orf17Q9NRJ1 99 aa4.81□□□□□ -1.64
VCP-206ENST00000480327 PRO0628Q9UI54 55 aa4.81□□□□□ -1.64
VCP-206ENST00000480327 A8MUU9 505 aa4.8□□□□□ -1.64
VCP-206ENST00000480327 LORP23490 312 aaPredicted RBP4.8□□□□□ -1.64
VCP-206ENST00000480327 ATP11AUNQ6ZP68 121 aa4.8□□□□□ -1.64
VCP-206ENST00000480327 SERP2Q8N6R1 65 aa4.79□□□□□ -1.64
VCP-206ENST00000480327 KRTAP10-6P60371 365 aaPredicted RBP4.78□□□□□ -1.64
VCP-206ENST00000480327 MMP24-AS1A0A0U1RRL7 71 aa4.77□□□□□ -1.65
VCP-206ENST00000480327 WFDC13Q8IUB5 93 aa4.76□□□□□ -1.65
VCP-206ENST00000480327 hDV103S1A0JD37 113 aa4.75□□□□□ -1.65
VCP-206ENST00000480327 C4orf26Q17RF5 130 aa4.74□□□□□ -1.65
VCP-206ENST00000480327 TMEM254Q8TBM7 123 aa4.74□□□□□ -1.65
VCP-206ENST00000480327 MRPL34Q9BQ48 92 aaKnown RBP4.74□□□□□ -1.65
VCP-206ENST00000480327 NDUFS5O43920 106 aa4.73□□□□□ -1.65
VCP-206ENST00000480327 CXCL6P80162 114 aa4.73□□□□□ -1.65
VCP-206ENST00000480327 CASC2Q6XLA1 102 aa4.73□□□□□ -1.65
VCP-206ENST00000480327 Q8N9P0 234 aaPredicted RBP4.73□□□□□ -1.65
VCP-206ENST00000480327 SERP1Q9Y6X1 66 aa4.73□□□□□ -1.65
VCP-206ENST00000480327 SSPOA2VEC9 5147 aa4.73□□□□□ -1.65
VCP-206ENST00000480327 ATP5EP2Q5VTU8 51 aa4.72□□□□□ -1.65
VCP-206ENST00000480327 SMIM26A0A096LP01 95 aa4.71□□□□□ -1.66
VCP-206ENST00000480327 HCG22E2RYF7 251 aa4.71□□□□□ -1.66
VCP-206ENST00000480327 SEC61GP60059 68 aa4.71□□□□□ -1.66
VCP-206ENST00000480327 V9GYY9 64 aa4.71□□□□□ -1.66
VCP-206ENST00000480327 USH2AO75445 5202 aa4.7□□□□□ -1.66
VCP-206ENST00000480327 ZCCHC13Q8WW36 166 aaKnown RBP4.7□□□□□ -1.66
VCP-206ENST00000480327 FAM236DA0A1B0GTK5 79 aa4.69□□□□□ -1.66
VCP-206ENST00000480327 FAM236CP0DP71 79 aa4.69□□□□□ -1.66
VCP-206ENST00000480327 ATP5EP56381 51 aaPredicted RBP4.69□□□□□ -1.66
VCP-206ENST00000480327 NDUFC1O43677 76 aa4.66□□□□□ -1.66
VCP-206ENST00000480327 CYSTM1Q9H1C7 97 aa4.66□□□□□ -1.66
VCP-206ENST00000480327 A0A087WVE0 104 aa4.64□□□□□ -1.67
VCP-206ENST00000480327 M0R2T5 61 aa4.64□□□□□ -1.67
VCP-206ENST00000480327 Q5W150 140 aa4.64□□□□□ -1.67
VCP-206ENST00000480327 SPINK7P58062 85 aa4.63□□□□□ -1.67
VCP-206ENST00000480327 KLKP1Q107X0 134 aa4.63□□□□□ -1.67
VCP-206ENST00000480327 COX6B2Q6YFQ2 88 aa4.63□□□□□ -1.67
VCP-206ENST00000480327 TRAV7A0A075B6U4 112 aa4.62□□□□□ -1.67
VCP-206ENST00000480327 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.62□□□□□ -1.67
VCP-206ENST00000480327 H7BZZ5 65 aa4.61□□□□□ -1.67
VCP-206ENST00000480327 IGKV2D-30A0A075B6S6 120 aa4.6□□□□□ -1.67
VCP-206ENST00000480327 KRTAP9-7A8MTY7 169 aa4.6□□□□□ -1.67
VCP-206ENST00000480327 IGKV2-30P06310 120 aa4.6□□□□□ -1.67
VCP-206ENST00000480327 HRES1P13985 223 aa4.6□□□□□ -1.67
VCP-206ENST00000480327 C20orf197Q8N268 126 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms