RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 LINC00846Q9NV44 126 aa5.77□□□□□ -1.49
SMURF1-204ENST00000480055 TRBV7-6A0A0J9YX20 115 aa5.76□□□□□ -1.49
SMURF1-204ENST00000480055 TRBV10-3A0A0K0K1G6 114 aa5.76□□□□□ -1.49
SMURF1-204ENST00000480055 MOBPQ13875 183 aa5.76□□□□□ -1.49
SMURF1-204ENST00000480055 MPLKIPQ8TAP9 179 aa5.76□□□□□ -1.49
SMURF1-204ENST00000480055 LOC110117498A0A087WWA1 95 aa5.75□□□□□ -1.49
SMURF1-204ENST00000480055 IGKV2-30P06310 120 aa5.75□□□□□ -1.49
SMURF1-204ENST00000480055 COX7CP15954 63 aa5.75□□□□□ -1.49
SMURF1-204ENST00000480055 SS18L2Q9UHA2 77 aa5.75□□□□□ -1.49
SMURF1-204ENST00000480055 C6orf99Q4VX62 202 aa5.74□□□□□ -1.49
SMURF1-204ENST00000480055 LINC00483Q53H64 154 aa5.74□□□□□ -1.49
SMURF1-204ENST00000480055 Q8N377 158 aa5.74□□□□□ -1.49
SMURF1-204ENST00000480055 KCNQ1DNQ9H478 68 aa5.74□□□□□ -1.49
SMURF1-204ENST00000480055 PDE6GP18545 87 aa5.73□□□□□ -1.49
SMURF1-204ENST00000480055 KRTAP19-2Q3LHN2 52 aa5.73□□□□□ -1.49
SMURF1-204ENST00000480055 SSBP3-AS1Q7Z2R9 100 aa5.73□□□□□ -1.49
SMURF1-204ENST00000480055 hADV29S1A0JD25 119 aa5.72□□□□□ -1.49
SMURF1-204ENST00000480055 SPRR1AP35321 89 aa5.72□□□□□ -1.49
SMURF1-204ENST00000480055 RPS29P62273 56 aaKnown RBP5.72□□□□□ -1.49
SMURF1-204ENST00000480055 MT1HP80294 61 aa5.72□□□□□ -1.49
SMURF1-204ENST00000480055 C9orf153Q5TBE3 101 aa5.72□□□□□ -1.49
SMURF1-204ENST00000480055 Q6ZQT0 140 aa5.72□□□□□ -1.49
SMURF1-204ENST00000480055 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.71□□□□□ -1.5
SMURF1-204ENST00000480055 KRTAP4-16G5E9R7 235 aaPredicted RBP5.7□□□□□ -1.5
SMURF1-204ENST00000480055 ERC2-IT1O76042 136 aa5.7□□□□□ -1.5
SMURF1-204ENST00000480055 SERP2Q8N6R1 65 aa5.7□□□□□ -1.5
SMURF1-204ENST00000480055 TRAV23DV6A0A075B6W5 121 aa5.69□□□□□ -1.5
SMURF1-204ENST00000480055 ELOF1P60002 83 aaKnown RBP5.69□□□□□ -1.5
SMURF1-204ENST00000480055 RBM3P98179 157 aaKnown RBP5.69□□□□□ -1.5
SMURF1-204ENST00000480055 IGKV3D-7A0A0C4DH55 119 aa5.68□□□□□ -1.5
SMURF1-204ENST00000480055 UBL5Q9BZL1 73 aa5.68□□□□□ -1.5
SMURF1-204ENST00000480055 IGLV8-61A0A075B6I0 122 aa5.67□□□□□ -1.5
SMURF1-204ENST00000480055 TRBV7-4A0A0J9YYF1 115 aa5.67□□□□□ -1.5
SMURF1-204ENST00000480055 ZNF73O43830 326 aaPredicted RBP5.67□□□□□ -1.5
SMURF1-204ENST00000480055 Q9BRP9 147 aa5.67□□□□□ -1.5
SMURF1-204ENST00000480055 COX7BP24311 80 aa5.66□□□□□ -1.5
SMURF1-204ENST00000480055 KRTAP10-6P60371 365 aaPredicted RBP5.66□□□□□ -1.5
SMURF1-204ENST00000480055 PCOTHQ58A44 107 aa5.66□□□□□ -1.5
SMURF1-204ENST00000480055 Q6ZRX8 168 aa5.66□□□□□ -1.5
SMURF1-204ENST00000480055 C9orf92A6NGG3 77 aa5.65□□□□□ -1.5
SMURF1-204ENST00000480055 RPS28P62857 69 aaKnown RBP5.65□□□□□ -1.5
SMURF1-204ENST00000480055 CXCL6P80162 114 aa5.65□□□□□ -1.5
SMURF1-204ENST00000480055 HRCT1Q6UXD1 115 aa5.65□□□□□ -1.5
SMURF1-204ENST00000480055 Q6ZQY7 126 aa5.65□□□□□ -1.5
SMURF1-204ENST00000480055 Q8N9P0 234 aaPredicted RBP5.65□□□□□ -1.5
SMURF1-204ENST00000480055 TMEM258P61165 79 aa5.64□□□□□ -1.51
SMURF1-204ENST00000480055 DSCR8Q96T75 97 aa5.64□□□□□ -1.51
SMURF1-204ENST00000480055 A0A087WVE0 104 aa5.63□□□□□ -1.51
SMURF1-204ENST00000480055 M0R2T5 61 aa5.63□□□□□ -1.51
SMURF1-204ENST00000480055 SMIM20Q8N5G0 67 aa5.63□□□□□ -1.51
SMURF1-204ENST00000480055 ST20-AS1Q8NBB2 130 aa5.63□□□□□ -1.51
SMURF1-204ENST00000480055 LIMD2Q9BT23 127 aa5.63□□□□□ -1.51
SMURF1-204ENST00000480055 LAMTOR3Q9UHA4 124 aa5.63□□□□□ -1.51
SMURF1-204ENST00000480055 Q6ZVQ6 151 aa5.62□□□□□ -1.51
SMURF1-204ENST00000480055 A0A1B0GW54 56 aa5.61□□□□□ -1.51
SMURF1-204ENST00000480055 FLGP20930 4061 aaPredicted RBP5.6□□□□□ -1.51
SMURF1-204ENST00000480055 TRAV7A0A075B6U4 112 aa5.59□□□□□ -1.51
SMURF1-204ENST00000480055 J3KT08 172 aa5.59□□□□□ -1.51
SMURF1-204ENST00000480055 COX6B2Q6YFQ2 88 aa5.58□□□□□ -1.52
SMURF1-204ENST00000480055 IGLV5-48A0A075B6I7 105 aa5.57□□□□□ -1.52
SMURF1-204ENST00000480055 CYSTM1Q9H1C7 97 aa5.57□□□□□ -1.52
SMURF1-204ENST00000480055 KLKP1Q107X0 134 aa5.56□□□□□ -1.52
SMURF1-204ENST00000480055 DEFB105AQ8NG35 78 aa5.55□□□□□ -1.52
SMURF1-204ENST00000480055 DHRS4-AS1Q9P1J3 65 aa5.55□□□□□ -1.52
SMURF1-204ENST00000480055 SPRR1BP22528 89 aa5.53□□□□□ -1.52
SMURF1-204ENST00000480055 A0A0A0MQY5 61 aa5.52□□□□□ -1.53
SMURF1-204ENST00000480055 NDUFC1O43677 76 aa5.51□□□□□ -1.53
SMURF1-204ENST00000480055 CD164Q04900 197 aa5.51□□□□□ -1.53
SMURF1-204ENST00000480055 SSPOA2VEC9 5147 aa5.5□□□□□ -1.53
SMURF1-204ENST00000480055 H7BZZ5 65 aa5.5□□□□□ -1.53
SMURF1-204ENST00000480055 RPL37P61927 97 aaKnown RBP5.5□□□□□ -1.53
SMURF1-204ENST00000480055 IGKV2D-30A0A075B6S6 120 aa5.49□□□□□ -1.53
SMURF1-204ENST00000480055 IGKV4-1P06312 121 aa5.49□□□□□ -1.53
SMURF1-204ENST00000480055 ATP5EP56381 51 aaPredicted RBP5.49□□□□□ -1.53
SMURF1-204ENST00000480055 C20orf197Q8N268 126 aa5.49□□□□□ -1.53
SMURF1-204ENST00000480055 FAM236DA0A1B0GTK5 79 aa5.48□□□□□ -1.53
SMURF1-204ENST00000480055 FAM236CP0DP71 79 aa5.48□□□□□ -1.53
SMURF1-204ENST00000480055 C1orf195Q5TG92 126 aa5.48□□□□□ -1.53
SMURF1-204ENST00000480055 USH2AO75445 5202 aa5.48□□□□□ -1.53
SMURF1-204ENST00000480055 NREPQ16612 68 aa5.47□□□□□ -1.53
SMURF1-204ENST00000480055 A0A0G2JQZ4 141 aa5.46□□□□□ -1.54
SMURF1-204ENST00000480055 KRTAP5-3Q6L8H2 238 aa5.46□□□□□ -1.54
SMURF1-204ENST00000480055 OCR1Q9BZK8 76 aa5.46□□□□□ -1.54
SMURF1-204ENST00000480055 SERP1Q9Y6X1 66 aa5.46□□□□□ -1.54
SMURF1-204ENST00000480055 A0A1W2PNM2 257 aa5.45□□□□□ -1.54
SMURF1-204ENST00000480055 BPY2O14599 106 aa5.45□□□□□ -1.54
SMURF1-204ENST00000480055 Q5XG85 94 aa5.45□□□□□ -1.54
SMURF1-204ENST00000480055 SMIM29Q86T20 159 aa5.45□□□□□ -1.54
SMURF1-204ENST00000480055 TMEM254Q8TBM7 123 aa5.42□□□□□ -1.54
SMURF1-204ENST00000480055 FCGBPQ9Y6R7 5405 aaPredicted RBP5.41□□□□□ -1.54
SMURF1-204ENST00000480055 ATP11AUNQ6ZP68 121 aa5.41□□□□□ -1.54
SMURF1-204ENST00000480055 F8WEM9 126 aa5.4□□□□□ -1.54
SMURF1-204ENST00000480055 C5orf47Q569G3 176 aa5.4□□□□□ -1.54
SMURF1-204ENST00000480055 SNURFQ9Y675 71 aa5.39□□□□□ -1.55
SMURF1-204ENST00000480055 DSCR10P59022 87 aa5.38□□□□□ -1.55
SMURF1-204ENST00000480055 Q8N9L7 120 aa5.38□□□□□ -1.55
SMURF1-204ENST00000480055 LCE1AQ5T7P2 110 aa5.37□□□□□ -1.55
SMURF1-204ENST00000480055 SMIM26A0A096LP01 95 aa5.36□□□□□ -1.55
SMURF1-204ENST00000480055 IGFL1Q6UW32 110 aa5.36□□□□□ -1.55
SMURF1-204ENST00000480055 ZCCHC13Q8WW36 166 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms