RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 Q6ZR54 194 aa6.68□□□□□ -1.34
CHD6-208ENST00000480022 J3QL48 77 aa6.67□□□□□ -1.34
CHD6-208ENST00000480022 RETNLBQ9BQ08 111 aa6.67□□□□□ -1.34
CHD6-208ENST00000480022 LY6G6CO95867 125 aa6.66□□□□□ -1.34
CHD6-208ENST00000480022 PRLHP81277 87 aa6.66□□□□□ -1.34
CHD6-208ENST00000480022 ALMS1Q8TCU4 4167 aa6.66□□□□□ -1.34
CHD6-208ENST00000480022 A0A087X002 238 aa6.65□□□□□ -1.34
CHD6-208ENST00000480022 LINC01556Q5JQF7 62 aa6.65□□□□□ -1.34
CHD6-208ENST00000480022 RTL8CO15255 209 aa6.64□□□□□ -1.35
CHD6-208ENST00000480022 SACSQ9NZJ4 4579 aa6.64□□□□□ -1.35
CHD6-208ENST00000480022 DNAH10OSP0CZ25 163 aa6.63□□□□□ -1.35
CHD6-208ENST00000480022 KMT2AQ03164 3969 aa6.61□□□□□ -1.35
CHD6-208ENST00000480022 KMT2CQ8NEZ4 4911 aaKnown RBP6.61□□□□□ -1.35
CHD6-208ENST00000480022 KRTAP1-5Q9BYS1 174 aa6.6□□□□□ -1.35
CHD6-208ENST00000480022 NBDYA0A0U1RRE5 68 aa6.59□□□□□ -1.35
CHD6-208ENST00000480022 HYDINQ4G0P3 5121 aa6.59□□□□□ -1.35
CHD6-208ENST00000480022 C8orf17Q9NRJ1 99 aa6.59□□□□□ -1.35
CHD6-208ENST00000480022 SPRR1BP22528 89 aa6.58□□□□□ -1.36
CHD6-208ENST00000480022 SPATA8Q6RVD6 105 aa6.58□□□□□ -1.36
CHD6-208ENST00000480022 DNAH6Q9C0G6 4158 aa6.57□□□□□ -1.36
CHD6-208ENST00000480022 SEC61BP60468 96 aaKnown RBP6.57□□□□□ -1.36
CHD6-208ENST00000480022 DNAH2Q9P225 4427 aa6.56□□□□□ -1.36
CHD6-208ENST00000480022 A0A096LNI7 61 aa6.56□□□□□ -1.36
CHD6-208ENST00000480022 ACYP2P14621 99 aa6.55□□□□□ -1.36
CHD6-208ENST00000480022 CSAG1Q6PB30 78 aa6.55□□□□□ -1.36
CHD6-208ENST00000480022 RYR2Q92736 4967 aa6.55□□□□□ -1.36
CHD6-208ENST00000480022 A0A1B0GU69 56 aa6.55□□□□□ -1.36
CHD6-208ENST00000480022 CDK2AP2O75956 126 aa6.54□□□□□ -1.36
CHD6-208ENST00000480022 Q96NJ1 140 aa6.54□□□□□ -1.36
CHD6-208ENST00000480022 MRPL34Q9BQ48 92 aaKnown RBP6.53□□□□□ -1.36
CHD6-208ENST00000480022 DNAH10Q8IVF4 4471 aa6.53□□□□□ -1.36
CHD6-208ENST00000480022 MIR22HGQ0VDD5 57 aa6.53□□□□□ -1.36
CHD6-208ENST00000480022 A0A1B0GVX0 72 aa6.51□□□□□ -1.37
CHD6-208ENST00000480022 C1orf134Q5TEV5 83 aa6.51□□□□□ -1.37
CHD6-208ENST00000480022 RYR3Q15413 4870 aa6.51□□□□□ -1.37
CHD6-208ENST00000480022 Q6ZRN7 208 aaPredicted RBP6.51□□□□□ -1.37
CHD6-208ENST00000480022 UQCR11O14957 56 aa6.5□□□□□ -1.37
CHD6-208ENST00000480022 DNAH17Q9UFH2 4485 aa6.48□□□□□ -1.37
CHD6-208ENST00000480022 FRAS1Q86XX4 4008 aa6.47□□□□□ -1.37
CHD6-208ENST00000480022 KRTAP16-1A8MUX0 517 aa6.46□□□□□ -1.37
CHD6-208ENST00000480022 ROMO1P60602 79 aa6.46□□□□□ -1.37
CHD6-208ENST00000480022 DMAC1Q96GE9 116 aa6.46□□□□□ -1.38
CHD6-208ENST00000480022 FAT2Q9NYQ8 4349 aa6.46□□□□□ -1.38
CHD6-208ENST00000480022 KRTAP11-1Q8IUC1 163 aa6.45□□□□□ -1.38
CHD6-208ENST00000480022 Q5W150 140 aa6.44□□□□□ -1.38
CHD6-208ENST00000480022 IGLV9-49A0A0B4J1Y8 123 aa6.43□□□□□ -1.38
CHD6-208ENST00000480022 KRTAP13-3Q3SY46 172 aa6.43□□□□□ -1.38
CHD6-208ENST00000480022 SRRM2Q9UQ35 2752 aaKnown RBP6.43□□□□□ -1.38
CHD6-208ENST00000480022 A0A087WTM6 91 aa6.42□□□□□ -1.38
CHD6-208ENST00000480022 ZNF861PO60384 105 aa6.41□□□□□ -1.38
CHD6-208ENST00000480022 DNAH11Q96DT5 4516 aa6.41□□□□□ -1.38
CHD6-208ENST00000480022 PKD1P98161 4303 aa6.38□□□□□ -1.39
CHD6-208ENST00000480022 C14orf177Q52M58 125 aa6.38□□□□□ -1.39
CHD6-208ENST00000480022 CHTF8P0CG12 524 aa6.37□□□□□ -1.39
CHD6-208ENST00000480022 A0A1B0GVY2 172 aa6.36□□□□□ -1.39
CHD6-208ENST00000480022 KRTAP10-2P60368 255 aa6.36□□□□□ -1.39
CHD6-208ENST00000480022 KRTAP13-1Q8IUC0 172 aa6.35□□□□□ -1.39
CHD6-208ENST00000480022 HECTD4Q9Y4D8 3996 aa6.34□□□□□ -1.39
CHD6-208ENST00000480022 DNAH5Q8TE73 4624 aa6.33□□□□□ -1.4
CHD6-208ENST00000480022 IGLV5-52A0A0A0MRZ9 124 aa6.33□□□□□ -1.4
CHD6-208ENST00000480022 KRTAP25-1Q3LHN0 102 aa6.31□□□□□ -1.4
CHD6-208ENST00000480022 LINC00483Q53H64 154 aa6.31□□□□□ -1.4
CHD6-208ENST00000480022 PKHD1P08F94 4074 aa6.3□□□□□ -1.4
CHD6-208ENST00000480022 IGLV7-43P04211 117 aa6.3□□□□□ -1.4
CHD6-208ENST00000480022 SPINK6Q6UWN8 80 aa6.3□□□□□ -1.4
CHD6-208ENST00000480022 DYNC1H1Q14204 4646 aaKnown RBP6.27□□□□□ -1.41
CHD6-208ENST00000480022 EPPK1P58107 5090 aaKnown RBP6.27□□□□□ -1.41
CHD6-208ENST00000480022 FAM229AH3BQW9 127 aa6.27□□□□□ -1.41
CHD6-208ENST00000480022 IGKV2-30P06310 120 aa6.27□□□□□ -1.41
CHD6-208ENST00000480022 LRP1BQ9NZR2 4599 aa6.27□□□□□ -1.41
CHD6-208ENST00000480022 KRTAP10-1P60331 282 aa6.26□□□□□ -1.41
CHD6-208ENST00000480022 A8MUU9 505 aa6.24□□□□□ -1.41
CHD6-208ENST00000480022 P0C880 135 aa6.24□□□□□ -1.41
CHD6-208ENST00000480022 DNAH8Q96JB1 4490 aa6.24□□□□□ -1.41
CHD6-208ENST00000480022 PANO1I0J062 215 aa6.23□□□□□ -1.41
CHD6-208ENST00000480022 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.23□□□□□ -1.41
CHD6-208ENST00000480022 Q6ZSA8 131 aa6.21□□□□□ -1.41
CHD6-208ENST00000480022 LUZP6Q538Z0 58 aa6.21□□□□□ -1.42
CHD6-208ENST00000480022 SPACA4Q8TDM5 124 aa6.21□□□□□ -1.42
CHD6-208ENST00000480022 LINC00304Q8N9R0 145 aa6.2□□□□□ -1.42
CHD6-208ENST00000480022 ANAPC11Q9NYG5 84 aa6.2□□□□□ -1.42
CHD6-208ENST00000480022 APOBP04114 4563 aaKnown RBP6.19□□□□□ -1.42
CHD6-208ENST00000480022 CIRBP-AS1Q8TBR5 109 aa6.17□□□□□ -1.42
CHD6-208ENST00000480022 IGKV2D-30A0A075B6S6 120 aa6.16□□□□□ -1.42
CHD6-208ENST00000480022 H0YAA0 97 aa6.16□□□□□ -1.42
CHD6-208ENST00000480022 K7ERS5 55 aa6.16□□□□□ -1.42
CHD6-208ENST00000480022 SPINK1P00995 79 aa6.14□□□□□ -1.43
CHD6-208ENST00000480022 C20orf166-AS1Q96NR2 134 aa6.13□□□□□ -1.43
CHD6-208ENST00000480022 BIRC6Q9NR09 4857 aa6.12□□□□□ -1.43
CHD6-208ENST00000480022 HSPG2P98160 4391 aa6.12□□□□□ -1.43
CHD6-208ENST00000480022 PSORS1C2Q9UIG4 136 aa6.11□□□□□ -1.43
CHD6-208ENST00000480022 RYR1P21817 5038 aa6.11□□□□□ -1.43
CHD6-208ENST00000480022 KIAA1109Q2LD37 5005 aa6.1□□□□□ -1.43
CHD6-208ENST00000480022 SMR3BP02814 79 aaPredicted RBP6.09□□□□□ -1.43
CHD6-208ENST00000480022 FAT1Q14517 4588 aa6.08□□□□□ -1.44
CHD6-208ENST00000480022 CRIPTQ9P021 101 aa6.07□□□□□ -1.44
CHD6-208ENST00000480022 A0A1B0GU33 70 aa6.06□□□□□ -1.44
CHD6-208ENST00000480022 NDUFAF8A1L188 74 aa6.06□□□□□ -1.44
CHD6-208ENST00000480022 KRTAP17-1Q9BYP8 105 aa6.05□□□□□ -1.44
CHD6-208ENST00000480022 SSBP3-AS1Q7Z2R9 100 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms