RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 Q96NJ1 140 aa10.92□□□□□ -0.66
TRIM8-203ENST00000479004 ETDBQ3ZM63 59 aa10.9□□□□□ -0.66
TRIM8-203ENST00000479004 LINC00472Q9H8W2 130 aa10.9□□□□□ -0.66
TRIM8-203ENST00000479004 IGKV4-1P06312 121 aa10.87□□□□□ -0.67
TRIM8-203ENST00000479004 MT1HP80294 61 aa10.85□□□□□ -0.67
TRIM8-203ENST00000479004 SIGMAR1Q99720 223 aa10.85□□□□□ -0.67
TRIM8-203ENST00000479004 NREPQ16612 68 aa10.84□□□□□ -0.67
TRIM8-203ENST00000479004 KRTAP9-6A0A140TA67 174 aa10.83□□□□□ -0.68
TRIM8-203ENST00000479004 J3KT08 172 aa10.83□□□□□ -0.68
TRIM8-203ENST00000479004 DEFB116Q30KQ4 102 aa10.83□□□□□ -0.68
TRIM8-203ENST00000479004 LCE2DQ5TA82 110 aaPredicted RBP10.82□□□□□ -0.68
TRIM8-203ENST00000479004 FLGP20930 4061 aaPredicted RBP10.8□□□□□ -0.68
TRIM8-203ENST00000479004 NDUFB1O75438 58 aa10.73□□□□□ -0.69
TRIM8-203ENST00000479004 Q75L30 129 aa10.73□□□□□ -0.69
TRIM8-203ENST00000479004 Q6ZVQ6 151 aa10.72□□□□□ -0.69
TRIM8-203ENST00000479004 UBL5Q9BZL1 73 aa10.72□□□□□ -0.69
TRIM8-203ENST00000479004 LINC00846Q9NV44 126 aa10.72□□□□□ -0.69
TRIM8-203ENST00000479004 A0A1B0GVX0 72 aa10.71□□□□□ -0.69
TRIM8-203ENST00000479004 FSIP2Q5CZC0 6907 aa10.7□□□□□ -0.7
TRIM8-203ENST00000479004 IGHV6-1A0A0B4J1U7 121 aa10.7□□□□□ -0.7
TRIM8-203ENST00000479004 A8MWP4 228 aa10.7□□□□□ -0.7
TRIM8-203ENST00000479004 LINC00313P59037 77 aa10.7□□□□□ -0.7
TRIM8-203ENST00000479004 C8orf87E5RJ46 101 aa10.69□□□□□ -0.7
TRIM8-203ENST00000479004 DSCR10P59022 87 aa10.69□□□□□ -0.7
TRIM8-203ENST00000479004 ATP11AUNQ6ZP68 121 aa10.69□□□□□ -0.7
TRIM8-203ENST00000479004 BPY2O14599 106 aa10.68□□□□□ -0.7
TRIM8-203ENST00000479004 COX6B2Q6YFQ2 88 aa10.68□□□□□ -0.7
TRIM8-203ENST00000479004 ACYP1P07311 99 aa10.66□□□□□ -0.7
TRIM8-203ENST00000479004 LORP23490 312 aaPredicted RBP10.66□□□□□ -0.7
TRIM8-203ENST00000479004 KRTAP10-6P60371 365 aaPredicted RBP10.66□□□□□ -0.7
TRIM8-203ENST00000479004 IGKV3D-7A0A0C4DH55 119 aa10.64□□□□□ -0.71
TRIM8-203ENST00000479004 FAM240AA0A1B0GVK7 77 aa10.63□□□□□ -0.71
TRIM8-203ENST00000479004 M0R2T5 61 aa10.62□□□□□ -0.71
TRIM8-203ENST00000479004 NOTCH2NLQ7Z3S9 236 aa10.62□□□□□ -0.71
TRIM8-203ENST00000479004 PRR15Q8IV56 129 aa10.62□□□□□ -0.71
TRIM8-203ENST00000479004 C20orf166-AS1Q96NR2 134 aa10.61□□□□□ -0.71
TRIM8-203ENST00000479004 KRTAP16-1A8MUX0 517 aa10.59□□□□□ -0.71
TRIM8-203ENST00000479004 A8MUU9 505 aa10.58□□□□□ -0.72
TRIM8-203ENST00000479004 C8orf17Q9NRJ1 99 aa10.58□□□□□ -0.72
TRIM8-203ENST00000479004 K7EQZ3 153 aa10.57□□□□□ -0.72
TRIM8-203ENST00000479004 CRCT1Q9UGL9 99 aa10.55□□□□□ -0.72
TRIM8-203ENST00000479004 J3QR89 54 aa10.54□□□□□ -0.72
TRIM8-203ENST00000479004 CXCL6P80162 114 aa10.52□□□□□ -0.73
TRIM8-203ENST00000479004 MMP24-AS1A0A0U1RRL7 71 aa10.5□□□□□ -0.73
TRIM8-203ENST00000479004 Q8N9L7 120 aa10.5□□□□□ -0.73
TRIM8-203ENST00000479004 TMEM254Q8TBM7 123 aa10.47□□□□□ -0.73
TRIM8-203ENST00000479004 hDV103S1A0JD37 113 aa10.46□□□□□ -0.73
TRIM8-203ENST00000479004 ATP5EP2Q5VTU8 51 aa10.45□□□□□ -0.74
TRIM8-203ENST00000479004 Q8N9P0 234 aaPredicted RBP10.45□□□□□ -0.74
TRIM8-203ENST00000479004 MRPL34Q9BQ48 92 aaKnown RBP10.44□□□□□ -0.74
TRIM8-203ENST00000479004 LINC00643Q86TS7 51 aa10.42□□□□□ -0.74
TRIM8-203ENST00000479004 CASC2Q6XLA1 102 aa10.41□□□□□ -0.74
TRIM8-203ENST00000479004 WFDC13Q8IUB5 93 aa10.39□□□□□ -0.75
TRIM8-203ENST00000479004 HCG22E2RYF7 251 aa10.38□□□□□ -0.75
TRIM8-203ENST00000479004 K7ERU9 68 aa10.36□□□□□ -0.75
TRIM8-203ENST00000479004 ZCCHC13Q8WW36 166 aaKnown RBP10.35□□□□□ -0.75
TRIM8-203ENST00000479004 NDUFS5O43920 106 aa10.34□□□□□ -0.75
TRIM8-203ENST00000479004 HIST1H4AP62805 103 aaKnown RBP10.3□□□□□ -0.76
TRIM8-203ENST00000479004 KRTAP9-8Q9BYQ0 159 aa10.27□□□□□ -0.77
TRIM8-203ENST00000479004 HRES1P13985 223 aa10.25□□□□□ -0.77
TRIM8-203ENST00000479004 MPLKIPQ8TAP9 179 aa10.25□□□□□ -0.77
TRIM8-203ENST00000479004 FAM236DA0A1B0GTK5 79 aa10.23□□□□□ -0.77
TRIM8-203ENST00000479004 FAM236CP0DP71 79 aa10.23□□□□□ -0.77
TRIM8-203ENST00000479004 RBM12B-AS1Q9P1G2 102 aa10.21□□□□□ -0.77
TRIM8-203ENST00000479004 TP53AIP1Q9HCN2 124 aa10.19□□□□□ -0.78
TRIM8-203ENST00000479004 USH2AO75445 5202 aa10.19□□□□□ -0.78
TRIM8-203ENST00000479004 A0A087WVE0 104 aa10.17□□□□□ -0.78
TRIM8-203ENST00000479004 Q5W150 140 aa10.16□□□□□ -0.78
TRIM8-203ENST00000479004 SPINK7P58062 85 aa10.15□□□□□ -0.78
TRIM8-203ENST00000479004 SSPOA2VEC9 5147 aa10.12□□□□□ -0.79
TRIM8-203ENST00000479004 MT2AP02795 61 aa10.1□□□□□ -0.79
TRIM8-203ENST00000479004 IMUPQ9GZP8 106 aa10.1□□□□□ -0.79
TRIM8-203ENST00000479004 MT-ATP8P03928 68 aa10.07□□□□□ -0.8
TRIM8-203ENST00000479004 C7orf65Q6ZTY9 151 aa10.05□□□□□ -0.8
TRIM8-203ENST00000479004 IGKV2D-30A0A075B6S6 120 aa10.04□□□□□ -0.8
TRIM8-203ENST00000479004 IGKV2-30P06310 120 aa10.04□□□□□ -0.8
TRIM8-203ENST00000479004 UQCRQO14949 82 aa10.03□□□□□ -0.8
TRIM8-203ENST00000479004 MT1FP04733 61 aa10.02□□□□□ -0.81
TRIM8-203ENST00000479004 TRAV22A0A0B4J277 110 aa10□□□□□ -0.81
TRIM8-203ENST00000479004 SCGB1A1P11684 91 aa9.97□□□□□ -0.81
TRIM8-203ENST00000479004 KRTAP10-10P60014 251 aa9.95□□□□□ -0.82
TRIM8-203ENST00000479004 KRTAP9-3Q9BYQ3 159 aa9.95□□□□□ -0.82
TRIM8-203ENST00000479004 OCR1Q9BZK8 76 aa9.95□□□□□ -0.82
TRIM8-203ENST00000479004 ATOX1O00244 68 aa9.93□□□□□ -0.82
TRIM8-203ENST00000479004 H0Y9P7 68 aa9.92□□□□□ -0.82
TRIM8-203ENST00000479004 LCE2BO14633 110 aa9.92□□□□□ -0.82
TRIM8-203ENST00000479004 LOC101927531A0A1B0GV80 90 aa9.91□□□□□ -0.82
TRIM8-203ENST00000479004 FAM236AA0A1B0GUQ0 79 aa9.88□□□□□ -0.83
TRIM8-203ENST00000479004 FAM236BA0A1B0GV22 79 aa9.88□□□□□ -0.83
TRIM8-203ENST00000479004 MP68P56378 58 aa9.86□□□□□ -0.83
TRIM8-203ENST00000479004 C5orf47Q569G3 176 aa9.86□□□□□ -0.83
TRIM8-203ENST00000479004 CYP4F30PQ9H0H9 118 aa9.86□□□□□ -0.83
TRIM8-203ENST00000479004 FCGBPQ9Y6R7 5405 aaPredicted RBP9.86□□□□□ -0.83
TRIM8-203ENST00000479004 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.84□□□□□ -0.83
TRIM8-203ENST00000479004 SMIM20Q8N5G0 67 aa9.84□□□□□ -0.83
TRIM8-203ENST00000479004 C1orf64Q8NEQ6 169 aa9.82□□□□□ -0.84
TRIM8-203ENST00000479004 C4orf26Q17RF5 130 aa9.81□□□□□ -0.84
TRIM8-203ENST00000479004 LINC00208Q96KT6 92 aa9.8□□□□□ -0.84
TRIM8-203ENST00000479004 H3BPC8 53 aa9.79□□□□□ -0.84
TRIM8-203ENST00000479004 KRTAP19-1Q8IUB9 90 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms