RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 MAP3K4Q9Y6R4 1608 aa-0.91□□□□□ -2.56
SYCP3-205ENST00000478238 VPS8Q8N3P4 1428 aa-0.91□□□□□ -2.56
SYCP3-205ENST00000478238 ZC3H13Q5T200 1668 aaKnown RBP-0.91□□□□□ -2.56
SYCP3-205ENST00000478238 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.91□□□□□ -2.56
SYCP3-205ENST00000478238 CCNB3Q8WWL7 1395 aa-0.93□□□□□ -2.56
SYCP3-205ENST00000478238 ITSN2Q9NZM3 1697 aa-0.93□□□□□ -2.56
SYCP3-205ENST00000478238 S100A8P05109 93 aa-0.93□□□□□ -2.56
SYCP3-205ENST00000478238 CHD7Q9P2D1 2997 aa-0.93□□□□□ -2.56
SYCP3-205ENST00000478238 CSMD1Q96PZ7 3565 aa-0.93□□□□□ -2.56
SYCP3-205ENST00000478238 CCDC88BA6NC98 1476 aa-0.93□□□□□ -2.56
SYCP3-205ENST00000478238 DYNC1H1Q14204 4646 aaKnown RBP-0.93□□□□□ -2.56
SYCP3-205ENST00000478238 ABCC3O15438 1527 aa-0.94□□□□□ -2.56
SYCP3-205ENST00000478238 NREPQ16612 68 aa-0.94□□□□□ -2.56
SYCP3-205ENST00000478238 Q9H521 79 aa-0.94□□□□□ -2.56
SYCP3-205ENST00000478238 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.94□□□□□ -2.56
SYCP3-205ENST00000478238 KIAA0586Q9BVV6 1533 aa-0.94□□□□□ -2.56
SYCP3-205ENST00000478238 NRAPQ86VF7 1730 aa-0.95□□□□□ -2.56
SYCP3-205ENST00000478238 SMR3BP02814 79 aaPredicted RBP-0.95□□□□□ -2.56
SYCP3-205ENST00000478238 MT1XP80297 61 aa-0.95□□□□□ -2.56
SYCP3-205ENST00000478238 SMG1Q96Q15 3661 aaKnown RBP-0.95□□□□□ -2.56
SYCP3-205ENST00000478238 KIF1AQ12756 1690 aa-0.95□□□□□ -2.56
SYCP3-205ENST00000478238 LY75O60449 1722 aa-0.95□□□□□ -2.56
SYCP3-205ENST00000478238 THOC2Q8NI27 1593 aaKnown RBP-0.96□□□□□ -2.56
SYCP3-205ENST00000478238 DEFB131BA0A096LNP1 70 aa-0.96□□□□□ -2.56
SYCP3-205ENST00000478238 CLPSL2Q6UWE3 100 aa-0.96□□□□□ -2.56
SYCP3-205ENST00000478238 LRBAP50851 2863 aa-0.96□□□□□ -2.56
SYCP3-205ENST00000478238 RNF17Q9BXT8 1623 aaKnown RBP-0.97□□□□□ -2.56
SYCP3-205ENST00000478238 ADGRG4Q8IZF6 3080 aa-0.97□□□□□ -2.56
SYCP3-205ENST00000478238 CDC42BPAQ5VT25 1732 aa-0.97□□□□□ -2.56
SYCP3-205ENST00000478238 WT1-ASQ06250 92 aa-0.97□□□□□ -2.56
SYCP3-205ENST00000478238 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.97□□□□□ -2.56
SYCP3-205ENST00000478238 EYSQ5T1H1 3165 aa-0.98□□□□□ -2.57
SYCP3-205ENST00000478238 A0A087WXM4 84 aa-0.98□□□□□ -2.57
SYCP3-205ENST00000478238 MMP24-AS1A0A0U1RRL7 71 aa-0.98□□□□□ -2.57
SYCP3-205ENST00000478238 PVALEFA0A1B0GWK0 134 aa-0.98□□□□□ -2.57
SYCP3-205ENST00000478238 KANTRA0A1W2PQU2 76 aa-0.98□□□□□ -2.57
SYCP3-205ENST00000478238 TNP1P09430 55 aa-0.98□□□□□ -2.57
SYCP3-205ENST00000478238 KRTAP20-1Q3LI63 56 aa-0.98□□□□□ -2.57
SYCP3-205ENST00000478238 V9GYS6 101 aa-0.98□□□□□ -2.57
SYCP3-205ENST00000478238 TTC37Q6PGP7 1564 aa-0.99□□□□□ -2.57
SYCP3-205ENST00000478238 IGLV5-48A0A075B6I7 105 aa-0.99□□□□□ -2.57
SYCP3-205ENST00000478238 MRPL33O75394 65 aaKnown RBP-0.99□□□□□ -2.57
SYCP3-205ENST00000478238 CRIP1P50238 77 aa-0.99□□□□□ -2.57
SYCP3-205ENST00000478238 TDRG1Q3Y452 100 aa-0.99□□□□□ -2.57
SYCP3-205ENST00000478238 ATP5EP2Q5VTU8 51 aa-0.99□□□□□ -2.57
SYCP3-205ENST00000478238 LRRIQ1Q96JM4 1722 aa-0.99□□□□□ -2.57
SYCP3-205ENST00000478238 DNAH17Q9UFH2 4485 aa-0.99□□□□□ -2.57
SYCP3-205ENST00000478238 MGAQ8IWI9 3026 aa-0.99□□□□□ -2.57
SYCP3-205ENST00000478238 SMIM13P0DJ93 91 aa-1□□□□□ -2.57
SYCP3-205ENST00000478238 RPS27P42677 84 aaKnown RBP-1□□□□□ -2.57
SYCP3-205ENST00000478238 RPS27LQ71UM5 84 aaKnown RBP-1□□□□□ -2.57
SYCP3-205ENST00000478238 HFM1A2PYH4 1435 aa-1□□□□□ -2.57
SYCP3-205ENST00000478238 ARHGAP35Q9NRY4 1499 aa-1□□□□□ -2.57
SYCP3-205ENST00000478238 NHSQ6T4R5 1651 aa-1□□□□□ -2.57
SYCP3-205ENST00000478238 KRTAP8-1Q8IUC2 63 aa-1.01□□□□□ -2.57
SYCP3-205ENST00000478238 UBL5Q9BZL1 73 aa-1.01□□□□□ -2.57
SYCP3-205ENST00000478238 KCNQ1DNQ9H478 68 aa-1.01□□□□□ -2.57
SYCP3-205ENST00000478238 KDM5DQ9BY66 1539 aa-1.01□□□□□ -2.57
SYCP3-205ENST00000478238 MYO9AB2RTY4 2548 aa-1.01□□□□□ -2.57
SYCP3-205ENST00000478238 CEP295Q9C0D2 2601 aa-1.02□□□□□ -2.57
SYCP3-205ENST00000478238 ITPR2Q14571 2701 aa-1.02□□□□□ -2.57
SYCP3-205ENST00000478238 TRRAPQ9Y4A5 3859 aa-1.02□□□□□ -2.57
SYCP3-205ENST00000478238 MT1EP04732 61 aa-1.02□□□□□ -2.57
SYCP3-205ENST00000478238 HMGA1P17096 107 aaKnown RBP-1.02□□□□□ -2.57
SYCP3-205ENST00000478238 SPTAN1Q13813 2472 aaKnown RBP-1.02□□□□□ -2.57
SYCP3-205ENST00000478238 MINOS1Q5TGZ0 78 aa-1.02□□□□□ -2.57
SYCP3-205ENST00000478238 INO80Q9ULG1 1556 aaPredicted RBP-1.02□□□□□ -2.57
SYCP3-205ENST00000478238 MYO5CQ9NQX4 1742 aa-1.03□□□□□ -2.57
SYCP3-205ENST00000478238 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.03□□□□□ -2.57
SYCP3-205ENST00000478238 RALGAPBQ86X10 1494 aa-1.03□□□□□ -2.57
SYCP3-205ENST00000478238 UACAQ9BZF9 1416 aa-1.03□□□□□ -2.57
SYCP3-205ENST00000478238 DEFB121Q5J5C9 76 aa-1.03□□□□□ -2.57
SYCP3-205ENST00000478238 SFTA3P0C7M3 94 aa-1.04□□□□□ -2.58
SYCP3-205ENST00000478238 BVES-AS1Q5T3Y7 98 aa-1.04□□□□□ -2.58
SYCP3-205ENST00000478238 NCBP2-AS2Q69YL0 99 aa-1.04□□□□□ -2.58
SYCP3-205ENST00000478238 A0A1B0GUL6 1792 aa-1.05□□□□□ -2.58
SYCP3-205ENST00000478238 H3BUT2 72 aa-1.05□□□□□ -2.58
SYCP3-205ENST00000478238 ENHOQ6UWT2 76 aa-1.05□□□□□ -2.58
SYCP3-205ENST00000478238 ST20Q9HBF5 79 aa-1.05□□□□□ -2.58
SYCP3-205ENST00000478238 DNAH10Q8IVF4 4471 aa-1.05□□□□□ -2.58
SYCP3-205ENST00000478238 H3BUA1 57 aa-1.06□□□□□ -2.58
SYCP3-205ENST00000478238 MT1HL1P0DM35 61 aa-1.06□□□□□ -2.58
SYCP3-205ENST00000478238 ADIRFQ15847 76 aa-1.06□□□□□ -2.58
SYCP3-205ENST00000478238 MT1LQ93083 61 aa-1.06□□□□□ -2.58
SYCP3-205ENST00000478238 NOP10Q9NPE3 64 aaKnown RBP-1.06□□□□□ -2.58
SYCP3-205ENST00000478238 C6orf48Q9UBA6 75 aa-1.06□□□□□ -2.58
SYCP3-205ENST00000478238 MAST1Q9Y2H9 1570 aa-1.06□□□□□ -2.58
SYCP3-205ENST00000478238 CFAP46Q8IYW2 2715 aa-1.07□□□□□ -2.58
SYCP3-205ENST00000478238 ETDCA0A1B0GVM5 59 aa-1.07□□□□□ -2.58
SYCP3-205ENST00000478238 FCER1GP30273 86 aa-1.07□□□□□ -2.58
SYCP3-205ENST00000478238 LMTK2Q8IWU2 1503 aa-1.07□□□□□ -2.58
SYCP3-205ENST00000478238 CD163L1Q9NR16 1453 aa-1.07□□□□□ -2.58
SYCP3-205ENST00000478238 DNAH5Q8TE73 4624 aa-1.08□□□□□ -2.58
SYCP3-205ENST00000478238 DCAF1Q9Y4B6 1507 aa-1.08□□□□□ -2.58
SYCP3-205ENST00000478238 CSMD2Q7Z408 3487 aa-1.09□□□□□ -2.58
SYCP3-205ENST00000478238 C3P01024 1663 aa-1.09□□□□□ -2.58
SYCP3-205ENST00000478238 S100A13Q99584 98 aa-1.09□□□□□ -2.58
SYCP3-205ENST00000478238 ABCC1P33527 1531 aa-1.1□□□□□ -2.58
SYCP3-205ENST00000478238 ASXL1Q8IXJ9 1541 aa-1.1□□□□□ -2.58
SYCP3-205ENST00000478238 MROH1Q8NDA8 1641 aa-1.1□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms