RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 CYP4F30PQ9H0H9 118 aa5.82□□□□□ -1.48
CMC1-209ENST00000477739 HRES1P13985 223 aa5.81□□□□□ -1.48
CMC1-209ENST00000477739 C4orf48Q5BLP8 95 aa5.81□□□□□ -1.48
CMC1-209ENST00000477739 DNAH3Q8TD57 4116 aa5.81□□□□□ -1.48
CMC1-209ENST00000477739 LCA10Q71F78 164 aa5.81□□□□□ -1.48
CMC1-209ENST00000477739 PRAC1Q96KF2 57 aa5.81□□□□□ -1.48
CMC1-209ENST00000477739 LOC101927531A0A1B0GV80 90 aa5.8□□□□□ -1.48
CMC1-209ENST00000477739 WWC2-AS2Q96NR7 200 aa5.8□□□□□ -1.48
CMC1-209ENST00000477739 DNAH9Q9NYC9 4486 aa5.79□□□□□ -1.48
CMC1-209ENST00000477739 Q8N1X5 172 aa5.79□□□□□ -1.48
CMC1-209ENST00000477739 KRTAP13-1Q8IUC0 172 aa5.78□□□□□ -1.48
CMC1-209ENST00000477739 DNAH7Q8WXX0 4024 aa5.78□□□□□ -1.48
CMC1-209ENST00000477739 LCE6AA0A183 80 aa5.78□□□□□ -1.48
CMC1-209ENST00000477739 KRTAP10-2P60368 255 aa5.78□□□□□ -1.48
CMC1-209ENST00000477739 LINC00313P59037 77 aa5.77□□□□□ -1.49
CMC1-209ENST00000477739 TP53AIP1Q9HCN2 124 aa5.77□□□□□ -1.49
CMC1-209ENST00000477739 IGLV7-46A0A075B6I9 117 aa5.77□□□□□ -1.49
CMC1-209ENST00000477739 Q6ZR54 194 aa5.76□□□□□ -1.49
CMC1-209ENST00000477739 C9orf92A6NGG3 77 aa5.76□□□□□ -1.49
CMC1-209ENST00000477739 Q96NJ1 140 aa5.76□□□□□ -1.49
CMC1-209ENST00000477739 PLAC8Q9NZF1 115 aa5.76□□□□□ -1.49
CMC1-209ENST00000477739 IGLV7-43P04211 117 aa5.76□□□□□ -1.49
CMC1-209ENST00000477739 PLECQ15149 4684 aaKnown RBP5.76□□□□□ -1.49
CMC1-209ENST00000477739 C7orf65Q6ZTY9 151 aa5.75□□□□□ -1.49
CMC1-209ENST00000477739 A0A1B0GU69 56 aa5.75□□□□□ -1.49
CMC1-209ENST00000477739 FRAS1Q86XX4 4008 aa5.74□□□□□ -1.49
CMC1-209ENST00000477739 SPANXA2-OT1Q8N9U9 137 aa5.74□□□□□ -1.49
CMC1-209ENST00000477739 H3BPC8 53 aa5.74□□□□□ -1.49
CMC1-209ENST00000477739 ADM2Q7Z4H4 148 aa5.73□□□□□ -1.49
CMC1-209ENST00000477739 PLA2G1BP04054 148 aaKnown RBP5.72□□□□□ -1.49
CMC1-209ENST00000477739 DNAH1Q9P2D7 4330 aa5.72□□□□□ -1.49
CMC1-209ENST00000477739 LINC00483Q53H64 154 aa5.72□□□□□ -1.49
CMC1-209ENST00000477739 ATP11AUNQ6ZP68 121 aa5.71□□□□□ -1.49
CMC1-209ENST00000477739 ACYP2P14621 99 aa5.71□□□□□ -1.5
CMC1-209ENST00000477739 KMT2AQ03164 3969 aa5.69□□□□□ -1.5
CMC1-209ENST00000477739 RBM12B-AS1Q9P1G2 102 aa5.69□□□□□ -1.5
CMC1-209ENST00000477739 TYMSOSQ8TAI1 123 aa5.68□□□□□ -1.5
CMC1-209ENST00000477739 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
CMC1-209ENST00000477739 Q75L30 129 aa5.66□□□□□ -1.5
CMC1-209ENST00000477739 STARD9Q9P2P6 4700 aa5.66□□□□□ -1.5
CMC1-209ENST00000477739 CDC42SE1Q9NRR8 79 aa5.66□□□□□ -1.5
CMC1-209ENST00000477739 CRIPTQ9P021 101 aa5.65□□□□□ -1.5
CMC1-209ENST00000477739 KRTAP10-1P60331 282 aa5.65□□□□□ -1.5
CMC1-209ENST00000477739 SSBP3-AS1Q7Z2R9 100 aa5.65□□□□□ -1.51
CMC1-209ENST00000477739 DNHD1Q96M86 4753 aa5.64□□□□□ -1.51
CMC1-209ENST00000477739 PRKDCP78527 4128 aaKnown RBP5.64□□□□□ -1.51
CMC1-209ENST00000477739 FAM229AH3BQW9 127 aa5.62□□□□□ -1.51
CMC1-209ENST00000477739 LINC01558Q9Y6Z2 57 aa5.62□□□□□ -1.51
CMC1-209ENST00000477739 KRTAP13-2Q52LG2 175 aa5.6□□□□□ -1.51
CMC1-209ENST00000477739 MIR22HGQ0VDD5 57 aa5.6□□□□□ -1.51
CMC1-209ENST00000477739 DNAH8Q96JB1 4490 aa5.59□□□□□ -1.51
CMC1-209ENST00000477739 DNAH11Q96DT5 4516 aa5.59□□□□□ -1.51
CMC1-209ENST00000477739 C8orf87E5RJ46 101 aa5.57□□□□□ -1.52
CMC1-209ENST00000477739 VPS13DQ5THJ4 4388 aa5.56□□□□□ -1.52
CMC1-209ENST00000477739 ASB16-AS1Q495Z4 193 aa5.55□□□□□ -1.52
CMC1-209ENST00000477739 A6NN06 94 aa5.54□□□□□ -1.52
CMC1-209ENST00000477739 UQCR11O14957 56 aa5.54□□□□□ -1.52
CMC1-209ENST00000477739 DNAH6Q9C0G6 4158 aa5.54□□□□□ -1.52
CMC1-209ENST00000477739 DYNC2H1Q8NCM8 4307 aaKnown RBP5.52□□□□□ -1.53
CMC1-209ENST00000477739 LINC00304Q8N9R0 145 aa5.51□□□□□ -1.53
CMC1-209ENST00000477739 A0A0D9SG42 100 aa5.51□□□□□ -1.53
CMC1-209ENST00000477739 CSAG1Q6PB30 78 aa5.5□□□□□ -1.53
CMC1-209ENST00000477739 DNAH2Q9P225 4427 aa5.5□□□□□ -1.53
CMC1-209ENST00000477739 DNAH17Q9UFH2 4485 aa5.49□□□□□ -1.53
CMC1-209ENST00000477739 DMAC1Q96GE9 116 aa5.49□□□□□ -1.53
CMC1-209ENST00000477739 Q6ZSA8 131 aa5.49□□□□□ -1.53
CMC1-209ENST00000477739 SPATA8Q6RVD6 105 aa5.48□□□□□ -1.53
CMC1-209ENST00000477739 HECTD4Q9Y4D8 3996 aa5.47□□□□□ -1.53
CMC1-209ENST00000477739 LRP1BQ9NZR2 4599 aa5.46□□□□□ -1.53
CMC1-209ENST00000477739 ALMS1Q8TCU4 4167 aa5.46□□□□□ -1.54
CMC1-209ENST00000477739 KRTAP1-4P0C5Y4 121 aa5.45□□□□□ -1.54
CMC1-209ENST00000477739 FAT1Q14517 4588 aa5.42□□□□□ -1.54
CMC1-209ENST00000477739 KRTAP13-3Q3SY46 172 aa5.4□□□□□ -1.54
CMC1-209ENST00000477739 MYCBP2O75592 4640 aa5.39□□□□□ -1.55
CMC1-209ENST00000477739 LINC01554Q52M75 96 aa5.37□□□□□ -1.55
CMC1-209ENST00000477739 DNAH5Q8TE73 4624 aa5.37□□□□□ -1.55
CMC1-209ENST00000477739 A0A1B0GU33 70 aa5.36□□□□□ -1.55
CMC1-209ENST00000477739 KRTAP16-1A8MUX0 517 aa5.35□□□□□ -1.55
CMC1-209ENST00000477739 HYDINQ4G0P3 5121 aa5.35□□□□□ -1.55
CMC1-209ENST00000477739 VPS13BQ7Z7G8 4022 aa5.33□□□□□ -1.56
CMC1-209ENST00000477739 K7ERS5 55 aa5.32□□□□□ -1.56
CMC1-209ENST00000477739 PKHD1P08F94 4074 aa5.32□□□□□ -1.56
CMC1-209ENST00000477739 KRTAP21-3Q3LHN1 58 aa5.29□□□□□ -1.56
CMC1-209ENST00000477739 FAT2Q9NYQ8 4349 aa5.27□□□□□ -1.57
CMC1-209ENST00000477739 H0YAA0 97 aa5.27□□□□□ -1.57
CMC1-209ENST00000477739 SPINT4Q6UDR6 99 aa5.27□□□□□ -1.57
CMC1-209ENST00000477739 H3BS24 57 aa5.26□□□□□ -1.57
CMC1-209ENST00000477739 RPS29P62273 56 aaKnown RBP5.24□□□□□ -1.57
CMC1-209ENST00000477739 FAT3Q8TDW7 4589 aa5.23□□□□□ -1.57
CMC1-209ENST00000477739 H1FX-AS1Q4G0G2 97 aa5.21□□□□□ -1.57
CMC1-209ENST00000477739 A0A1B0GVY2 172 aa5.21□□□□□ -1.58
CMC1-209ENST00000477739 Q5VSD8 79 aa5.21□□□□□ -1.58
CMC1-209ENST00000477739 LRP1Q07954 4544 aaKnown RBP5.2□□□□□ -1.58
CMC1-209ENST00000477739 C10orf95Q9H7T3 257 aa5.2□□□□□ -1.58
CMC1-209ENST00000477739 KRTAP3-1Q9BYR8 98 aa5.19□□□□□ -1.58
CMC1-209ENST00000477739 PKD1P98161 4303 aa5.19□□□□□ -1.58
CMC1-209ENST00000477739 DYNC1H1Q14204 4646 aaKnown RBP5.19□□□□□ -1.58
CMC1-209ENST00000477739 COX6B2Q6YFQ2 88 aa5.19□□□□□ -1.58
CMC1-209ENST00000477739 A8MUU9 505 aa5.17□□□□□ -1.58
CMC1-209ENST00000477739 C20orf166-AS1Q96NR2 134 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms