RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 NREPQ16612 68 aa8.45□□□□□ -1.06
SEC13-215ENST00000477547 J3KT08 172 aa8.43□□□□□ -1.06
SEC13-215ENST00000477547 LCE2AQ5TA79 106 aaPredicted RBP8.43□□□□□ -1.06
SEC13-215ENST00000477547 A0A0U1RQV1 116 aa8.42□□□□□ -1.06
SEC13-215ENST00000477547 Q6ZVQ6 151 aa8.41□□□□□ -1.06
SEC13-215ENST00000477547 LINC00846Q9NV44 126 aa8.4□□□□□ -1.06
SEC13-215ENST00000477547 XP32Q5T750 250 aa8.39□□□□□ -1.07
SEC13-215ENST00000477547 UBL5Q9BZL1 73 aa8.39□□□□□ -1.07
SEC13-215ENST00000477547 A0A1B0GVX0 72 aa8.37□□□□□ -1.07
SEC13-215ENST00000477547 IGHV6-1A0A0B4J1U7 121 aa8.36□□□□□ -1.07
SEC13-215ENST00000477547 A8MWP4 228 aa8.35□□□□□ -1.07
SEC13-215ENST00000477547 BPY2O14599 106 aa8.35□□□□□ -1.07
SEC13-215ENST00000477547 DSCR10P59022 87 aa8.35□□□□□ -1.07
SEC13-215ENST00000477547 FAM240AA0A1B0GVK7 77 aa8.34□□□□□ -1.07
SEC13-215ENST00000477547 NDUFB1O75438 58 aa8.34□□□□□ -1.07
SEC13-215ENST00000477547 ACYP1P07311 99 aa8.32□□□□□ -1.08
SEC13-215ENST00000477547 IGKV3D-7A0A0C4DH55 119 aa8.31□□□□□ -1.08
SEC13-215ENST00000477547 C8orf87E5RJ46 101 aa8.31□□□□□ -1.08
SEC13-215ENST00000477547 LINC00313P59037 77 aa8.31□□□□□ -1.08
SEC13-215ENST00000477547 K7EQZ3 153 aa8.29□□□□□ -1.08
SEC13-215ENST00000477547 NOTCH2NLQ7Z3S9 236 aa8.29□□□□□ -1.08
SEC13-215ENST00000477547 PRR15Q8IV56 129 aa8.29□□□□□ -1.08
SEC13-215ENST00000477547 J3QR89 54 aa8.28□□□□□ -1.08
SEC13-215ENST00000477547 RPL37P61927 97 aaKnown RBP8.28□□□□□ -1.08
SEC13-215ENST00000477547 KRTAP16-1A8MUX0 517 aa8.27□□□□□ -1.09
SEC13-215ENST00000477547 C8orf17Q9NRJ1 99 aa8.27□□□□□ -1.09
SEC13-215ENST00000477547 SEC61BP60468 96 aaKnown RBP8.26□□□□□ -1.09
SEC13-215ENST00000477547 Q8N9L7 120 aa8.26□□□□□ -1.09
SEC13-215ENST00000477547 Q75L30 129 aa8.24□□□□□ -1.09
SEC13-215ENST00000477547 C20orf166-AS1Q96NR2 134 aa8.24□□□□□ -1.09
SEC13-215ENST00000477547 MMP24-AS1A0A0U1RRL7 71 aa8.23□□□□□ -1.09
SEC13-215ENST00000477547 CXCL6P80162 114 aa8.23□□□□□ -1.09
SEC13-215ENST00000477547 A8MUU9 505 aa8.22□□□□□ -1.09
SEC13-215ENST00000477547 FSIP2Q5CZC0 6907 aa8.21□□□□□ -1.09
SEC13-215ENST00000477547 ATP5EP2Q5VTU8 51 aa8.21□□□□□ -1.1
SEC13-215ENST00000477547 PCOTHQ58A44 107 aa8.2□□□□□ -1.1
SEC13-215ENST00000477547 CRCT1Q9UGL9 99 aa8.18□□□□□ -1.1
SEC13-215ENST00000477547 MUC17Q685J3 4493 aa8.18□□□□□ -1.1
SEC13-215ENST00000477547 TMEM254Q8TBM7 123 aa8.17□□□□□ -1.1
SEC13-215ENST00000477547 hDV103S1A0JD37 113 aa8.16□□□□□ -1.1
SEC13-215ENST00000477547 K7ERU9 68 aa8.16□□□□□ -1.1
SEC13-215ENST00000477547 ATP11AUNQ6ZP68 121 aa8.16□□□□□ -1.1
SEC13-215ENST00000477547 LINC00643Q86TS7 51 aa8.16□□□□□ -1.1
SEC13-215ENST00000477547 WFDC13Q8IUB5 93 aa8.16□□□□□ -1.1
SEC13-215ENST00000477547 MRPL34Q9BQ48 92 aaKnown RBP8.15□□□□□ -1.1
SEC13-215ENST00000477547 CASC2Q6XLA1 102 aa8.14□□□□□ -1.11
SEC13-215ENST00000477547 HCG22E2RYF7 251 aa8.13□□□□□ -1.11
SEC13-215ENST00000477547 Q8N9P0 234 aaPredicted RBP8.13□□□□□ -1.11
SEC13-215ENST00000477547 NDUFS5O43920 106 aa8.09□□□□□ -1.11
SEC13-215ENST00000477547 HIST1H4AP62805 103 aaKnown RBP8.09□□□□□ -1.11
SEC13-215ENST00000477547 KRTAP4-1Q9BYQ7 146 aa8.08□□□□□ -1.12
SEC13-215ENST00000477547 ZCCHC13Q8WW36 166 aaKnown RBP8.06□□□□□ -1.12
SEC13-215ENST00000477547 A0A087WVE0 104 aa8.03□□□□□ -1.12
SEC13-215ENST00000477547 MT-ATP8P03928 68 aa7.95□□□□□ -1.14
SEC13-215ENST00000477547 TP53AIP1Q9HCN2 124 aa7.93□□□□□ -1.14
SEC13-215ENST00000477547 Q5W150 140 aa7.92□□□□□ -1.14
SEC13-215ENST00000477547 IMUPQ9GZP8 106 aa7.9□□□□□ -1.14
SEC13-215ENST00000477547 SPINK7P58062 85 aa7.89□□□□□ -1.15
SEC13-215ENST00000477547 IGKV2D-30A0A075B6S6 120 aa7.86□□□□□ -1.15
SEC13-215ENST00000477547 IGKV2-30P06310 120 aa7.86□□□□□ -1.15
SEC13-215ENST00000477547 TRAV22A0A0B4J277 110 aa7.85□□□□□ -1.15
SEC13-215ENST00000477547 C7orf65Q6ZTY9 151 aa7.85□□□□□ -1.15
SEC13-215ENST00000477547 HRES1P13985 223 aa7.84□□□□□ -1.15
SEC13-215ENST00000477547 UQCRQO14949 82 aa7.83□□□□□ -1.16
SEC13-215ENST00000477547 KRTAP19-2Q3LHN2 52 aa7.83□□□□□ -1.16
SEC13-215ENST00000477547 COX6B2Q6YFQ2 88 aa7.83□□□□□ -1.16
SEC13-215ENST00000477547 FAM236AA0A1B0GUQ0 79 aa7.81□□□□□ -1.16
SEC13-215ENST00000477547 FAM236BA0A1B0GV22 79 aa7.81□□□□□ -1.16
SEC13-215ENST00000477547 SCGB1A1P11684 91 aa7.81□□□□□ -1.16
SEC13-215ENST00000477547 OCR1Q9BZK8 76 aa7.8□□□□□ -1.16
SEC13-215ENST00000477547 RBM12B-AS1Q9P1G2 102 aa7.79□□□□□ -1.16
SEC13-215ENST00000477547 H0Y9P7 68 aa7.78□□□□□ -1.16
SEC13-215ENST00000477547 FAM236DA0A1B0GTK5 79 aa7.78□□□□□ -1.16
SEC13-215ENST00000477547 FAM236CP0DP71 79 aa7.78□□□□□ -1.16
SEC13-215ENST00000477547 LCE2CQ5TA81 110 aa7.78□□□□□ -1.16
SEC13-215ENST00000477547 MPLKIPQ8TAP9 179 aa7.78□□□□□ -1.16
SEC13-215ENST00000477547 ATOX1O00244 68 aa7.76□□□□□ -1.17
SEC13-215ENST00000477547 LOC101927531A0A1B0GV80 90 aa7.74□□□□□ -1.17
SEC13-215ENST00000477547 KRTAP9-7A8MTY7 169 aa7.72□□□□□ -1.17
SEC13-215ENST00000477547 MP68P56378 58 aa7.71□□□□□ -1.18
SEC13-215ENST00000477547 MT1HP80294 61 aa7.69□□□□□ -1.18
SEC13-215ENST00000477547 SMIM20Q8N5G0 67 aa7.69□□□□□ -1.18
SEC13-215ENST00000477547 CYP4F30PQ9H0H9 118 aa7.69□□□□□ -1.18
SEC13-215ENST00000477547 C5orf47Q569G3 176 aa7.68□□□□□ -1.18
SEC13-215ENST00000477547 C1orf64Q8NEQ6 169 aa7.68□□□□□ -1.18
SEC13-215ENST00000477547 LINC00208Q96KT6 92 aa7.68□□□□□ -1.18
SEC13-215ENST00000477547 TRAV7A0A075B6U4 112 aa7.66□□□□□ -1.18
SEC13-215ENST00000477547 C4orf26Q17RF5 130 aa7.66□□□□□ -1.18
SEC13-215ENST00000477547 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.65□□□□□ -1.18
SEC13-215ENST00000477547 LORP23490 312 aaPredicted RBP7.64□□□□□ -1.19
SEC13-215ENST00000477547 H3BPC8 53 aa7.63□□□□□ -1.19
SEC13-215ENST00000477547 LCE2BO14633 110 aa7.63□□□□□ -1.19
SEC13-215ENST00000477547 KRTAP10-6P60371 365 aaPredicted RBP7.62□□□□□ -1.19
SEC13-215ENST00000477547 M0R2T5 61 aa7.59□□□□□ -1.19
SEC13-215ENST00000477547 KLKP1Q107X0 134 aa7.56□□□□□ -1.2
SEC13-215ENST00000477547 H1FX-AS1Q4G0G2 97 aa7.56□□□□□ -1.2
SEC13-215ENST00000477547 SERP2Q8N6R1 65 aa7.56□□□□□ -1.2
SEC13-215ENST00000477547 FLGP20930 4061 aaPredicted RBP7.56□□□□□ -1.2
SEC13-215ENST00000477547 KRTAP3-1Q9BYR8 98 aa7.52□□□□□ -1.21
SEC13-215ENST00000477547 SSPOA2VEC9 5147 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms