RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 K7EIL1 84 aa5.18□□□□□ -1.58
VAPB-205ENST00000476395 CDK2AP2O75956 126 aa5.17□□□□□ -1.58
VAPB-205ENST00000476395 ALMS1Q8TCU4 4167 aa5.17□□□□□ -1.58
VAPB-205ENST00000476395 DNAH17Q9UFH2 4485 aa5.17□□□□□ -1.58
VAPB-205ENST00000476395 LOC101927531A0A1B0GV80 90 aa5.17□□□□□ -1.58
VAPB-205ENST00000476395 A0A1B0GW54 56 aa5.16□□□□□ -1.58
VAPB-205ENST00000476395 SPANXA2-OT1Q8N9U9 137 aa5.16□□□□□ -1.58
VAPB-205ENST00000476395 IGLV8-61A0A075B6I0 122 aa5.15□□□□□ -1.59
VAPB-205ENST00000476395 IGLV9-49A0A0B4J1Y8 123 aa5.12□□□□□ -1.59
VAPB-205ENST00000476395 DNAH6Q9C0G6 4158 aa5.12□□□□□ -1.59
VAPB-205ENST00000476395 CSAG1Q6PB30 78 aa5.12□□□□□ -1.59
VAPB-205ENST00000476395 IGLV7-46A0A075B6I9 117 aa5.11□□□□□ -1.59
VAPB-205ENST00000476395 ASB16-AS1Q495Z4 193 aa5.11□□□□□ -1.59
VAPB-205ENST00000476395 ROMO1P60602 79 aa5.11□□□□□ -1.59
VAPB-205ENST00000476395 IGKV2-24A0A0C4DH68 120 aa5.1□□□□□ -1.59
VAPB-205ENST00000476395 PANO1I0J062 215 aa5.1□□□□□ -1.59
VAPB-205ENST00000476395 HRES1P13985 223 aa5.1□□□□□ -1.59
VAPB-205ENST00000476395 PLAC8Q9NZF1 115 aa5.1□□□□□ -1.59
VAPB-205ENST00000476395 MMP24-AS1A0A0U1RRL7 71 aa5.09□□□□□ -1.59
VAPB-205ENST00000476395 LINC01558Q9Y6Z2 57 aa5.09□□□□□ -1.59
VAPB-205ENST00000476395 CHTF8P0CG12 524 aa5.09□□□□□ -1.59
VAPB-205ENST00000476395 NOTCH2NLQ7Z3S9 236 aa5.09□□□□□ -1.59
VAPB-205ENST00000476395 A8MWP4 228 aa5.08□□□□□ -1.6
VAPB-205ENST00000476395 MIR22HGQ0VDD5 57 aa5.08□□□□□ -1.6
VAPB-205ENST00000476395 LINC00472Q9H8W2 130 aa5.08□□□□□ -1.6
VAPB-205ENST00000476395 KRTAP13-1Q8IUC0 172 aa5.08□□□□□ -1.6
VAPB-205ENST00000476395 SPRR1BP22528 89 aa5.08□□□□□ -1.6
VAPB-205ENST00000476395 DNAH5Q8TE73 4624 aa5.06□□□□□ -1.6
VAPB-205ENST00000476395 Q96NJ1 140 aa5.05□□□□□ -1.6
VAPB-205ENST00000476395 DNAH11Q96DT5 4516 aa5.05□□□□□ -1.6
VAPB-205ENST00000476395 H3BPC8 53 aa5.05□□□□□ -1.6
VAPB-205ENST00000476395 Q6ZRN7 208 aaPredicted RBP5.04□□□□□ -1.6
VAPB-205ENST00000476395 A0A087X002 238 aa5.04□□□□□ -1.6
VAPB-205ENST00000476395 LCE2BO14633 110 aa5.04□□□□□ -1.6
VAPB-205ENST00000476395 APLNQ9ULZ1 77 aa5.04□□□□□ -1.6
VAPB-205ENST00000476395 KRTAP21-3Q3LHN1 58 aa5.03□□□□□ -1.6
VAPB-205ENST00000476395 PKD1P98161 4303 aa5.03□□□□□ -1.6
VAPB-205ENST00000476395 LUZP6Q538Z0 58 aa5.03□□□□□ -1.6
VAPB-205ENST00000476395 Q6ZR54 194 aa5.01□□□□□ -1.61
VAPB-205ENST00000476395 K7ERS5 55 aa4.99□□□□□ -1.61
VAPB-205ENST00000476395 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.99□□□□□ -1.61
VAPB-205ENST00000476395 Q5W150 140 aa4.98□□□□□ -1.61
VAPB-205ENST00000476395 FAT2Q9NYQ8 4349 aa4.97□□□□□ -1.61
VAPB-205ENST00000476395 UBE2DNLQ8IWF7 75 aa4.97□□□□□ -1.61
VAPB-205ENST00000476395 C8orf17Q9NRJ1 99 aa4.97□□□□□ -1.61
VAPB-205ENST00000476395 HYDINQ4G0P3 5121 aa4.97□□□□□ -1.61
VAPB-205ENST00000476395 NUPR2A6NF83 97 aa4.96□□□□□ -1.61
VAPB-205ENST00000476395 RTL8CO15255 209 aa4.96□□□□□ -1.61
VAPB-205ENST00000476395 LCE2CQ5TA81 110 aa4.96□□□□□ -1.61
VAPB-205ENST00000476395 SPACA4Q8TDM5 124 aa4.96□□□□□ -1.62
VAPB-205ENST00000476395 LINC00483Q53H64 154 aa4.95□□□□□ -1.62
VAPB-205ENST00000476395 ANAPC11Q9NYG5 84 aa4.95□□□□□ -1.62
VAPB-205ENST00000476395 LRP1BQ9NZR2 4599 aa4.95□□□□□ -1.62
VAPB-205ENST00000476395 WWC2-AS2Q96NR7 200 aa4.93□□□□□ -1.62
VAPB-205ENST00000476395 NBDYA0A0U1RRE5 68 aa4.92□□□□□ -1.62
VAPB-205ENST00000476395 NDUFAF8A1L188 74 aa4.91□□□□□ -1.62
VAPB-205ENST00000476395 SPINK6Q6UWN8 80 aa4.91□□□□□ -1.62
VAPB-205ENST00000476395 TP53AIP1Q9HCN2 124 aa4.91□□□□□ -1.62
VAPB-205ENST00000476395 KRTAP13-3Q3SY46 172 aa4.91□□□□□ -1.62
VAPB-205ENST00000476395 MRPL34Q9BQ48 92 aaKnown RBP4.9□□□□□ -1.62
VAPB-205ENST00000476395 VPS13BQ7Z7G8 4022 aa4.9□□□□□ -1.62
VAPB-205ENST00000476395 A0A1B0GVX0 72 aa4.9□□□□□ -1.62
VAPB-205ENST00000476395 FLG2Q5D862 2391 aaPredicted RBP4.9□□□□□ -1.63
VAPB-205ENST00000476395 P0C880 135 aa4.9□□□□□ -1.63
VAPB-205ENST00000476395 A0A1B0GU69 56 aa4.89□□□□□ -1.63
VAPB-205ENST00000476395 C14orf177Q52M58 125 aa4.89□□□□□ -1.63
VAPB-205ENST00000476395 C20orf166-AS1Q96NR2 134 aa4.88□□□□□ -1.63
VAPB-205ENST00000476395 PSORS1C2Q9UIG4 136 aa4.87□□□□□ -1.63
VAPB-205ENST00000476395 IGLV5-52A0A0A0MRZ9 124 aa4.86□□□□□ -1.63
VAPB-205ENST00000476395 A0A087WTM6 91 aa4.86□□□□□ -1.63
VAPB-205ENST00000476395 SPATA8Q6RVD6 105 aa4.86□□□□□ -1.63
VAPB-205ENST00000476395 ACYP2P14621 99 aa4.84□□□□□ -1.63
VAPB-205ENST00000476395 KMT2CQ8NEZ4 4911 aaKnown RBP4.84□□□□□ -1.63
VAPB-205ENST00000476395 KRTAP25-1Q3LHN0 102 aa4.84□□□□□ -1.64
VAPB-205ENST00000476395 SPINT4Q6UDR6 99 aa4.83□□□□□ -1.64
VAPB-205ENST00000476395 PKHD1P08F94 4074 aa4.83□□□□□ -1.64
VAPB-205ENST00000476395 DMAC1Q96GE9 116 aa4.81□□□□□ -1.64
VAPB-205ENST00000476395 ZNF861PO60384 105 aa4.81□□□□□ -1.64
VAPB-205ENST00000476395 LY6G6CO95867 125 aa4.8□□□□□ -1.64
VAPB-205ENST00000476395 UQCR11O14957 56 aa4.8□□□□□ -1.64
VAPB-205ENST00000476395 CRIPTQ9P021 101 aa4.79□□□□□ -1.64
VAPB-205ENST00000476395 SACSQ9NZJ4 4579 aa4.78□□□□□ -1.64
VAPB-205ENST00000476395 SPINK1P00995 79 aa4.78□□□□□ -1.64
VAPB-205ENST00000476395 CIRBP-AS1Q8TBR5 109 aa4.78□□□□□ -1.64
VAPB-205ENST00000476395 LCE2AQ5TA79 106 aaPredicted RBP4.78□□□□□ -1.64
VAPB-205ENST00000476395 PKHD1L1Q86WI1 4243 aa4.76□□□□□ -1.65
VAPB-205ENST00000476395 IGLV7-43P04211 117 aa4.75□□□□□ -1.65
VAPB-205ENST00000476395 KRTAP13-2Q52LG2 175 aa4.75□□□□□ -1.65
VAPB-205ENST00000476395 A8MUU9 505 aa4.74□□□□□ -1.65
VAPB-205ENST00000476395 IGKV2D-30A0A075B6S6 120 aa4.74□□□□□ -1.65
VAPB-205ENST00000476395 IGKV2-30P06310 120 aa4.74□□□□□ -1.65
VAPB-205ENST00000476395 KRTAP10-2P60368 255 aa4.73□□□□□ -1.65
VAPB-205ENST00000476395 RYR3Q15413 4870 aa4.71□□□□□ -1.66
VAPB-205ENST00000476395 Q8N1X5 172 aa4.7□□□□□ -1.66
VAPB-205ENST00000476395 APOBP04114 4563 aaKnown RBP4.7□□□□□ -1.66
VAPB-205ENST00000476395 KRTAP1-4P0C5Y4 121 aa4.7□□□□□ -1.66
VAPB-205ENST00000476395 H0YAA0 97 aa4.69□□□□□ -1.66
VAPB-205ENST00000476395 Q6ZSA8 131 aa4.68□□□□□ -1.66
VAPB-205ENST00000476395 LINC00304Q8N9R0 145 aa4.68□□□□□ -1.66
VAPB-205ENST00000476395 DMBT1Q9UGM3 2413 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms