RNA–Protein interactions for RNA: ENST00000475427.2

PDE6C-202, Transcript of phosphodiesterase 6C, humanhuman

TSL 2

Gene PDE6C, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-202ENST00000475427 CENPHQ9H3R5 247 aa-2.09□□□□□ -2.74
PDE6C-202ENST00000475427 DIP2BQ9P265 1576 aa-2.1□□□□□ -2.75
PDE6C-202ENST00000475427 UNC80Q8N2C7 3258 aa-2.1□□□□□ -2.75
PDE6C-202ENST00000475427 ZFYVE16Q7Z3T8 1539 aa-2.1□□□□□ -2.75
PDE6C-202ENST00000475427 UBR1Q8IWV7 1749 aa-2.1□□□□□ -2.75
PDE6C-202ENST00000475427 CYB5AP00167 134 aa-2.1□□□□□ -2.75
PDE6C-202ENST00000475427 ARPC4P59998 168 aa-2.1□□□□□ -2.75
PDE6C-202ENST00000475427 PLGLAQ15195 96 aa-2.1□□□□□ -2.75
PDE6C-202ENST00000475427 ZNF720Q7Z2F6 126 aa-2.1□□□□□ -2.75
PDE6C-202ENST00000475427 CHMP6Q96FZ7 201 aa-2.1□□□□□ -2.75
PDE6C-202ENST00000475427 C6orf48Q9UBA6 75 aa-2.1□□□□□ -2.75
PDE6C-202ENST00000475427 PAIP2BQ9ULR5 123 aaKnown RBP-2.1□□□□□ -2.75
PDE6C-202ENST00000475427 MAP3K4Q9Y6R4 1608 aa-2.1□□□□□ -2.75
PDE6C-202ENST00000475427 SPHKAPQ2M3C7 1700 aa-2.11□□□□□ -2.75
PDE6C-202ENST00000475427 ARHGAP5Q13017 1502 aa-2.11□□□□□ -2.75
PDE6C-202ENST00000475427 NDUFA4O00483 81 aa-2.11□□□□□ -2.75
PDE6C-202ENST00000475427 CRIP1P50238 77 aa-2.11□□□□□ -2.75
PDE6C-202ENST00000475427 TTTY10Q9BZA0 68 aa-2.11□□□□□ -2.75
PDE6C-202ENST00000475427 NRAPQ86VF7 1730 aa-2.11□□□□□ -2.75
PDE6C-202ENST00000475427 VCANP13611 3396 aa-2.12□□□□□ -2.75
PDE6C-202ENST00000475427 FAM25AB3EWG3 89 aa-2.12□□□□□ -2.75
PDE6C-202ENST00000475427 FAM25CB3EWG5 89 aa-2.12□□□□□ -2.75
PDE6C-202ENST00000475427 FAM25GB3EWG6 89 aa-2.12□□□□□ -2.75
PDE6C-202ENST00000475427 NBEAP1P0C6P0 100 aa-2.12□□□□□ -2.75
PDE6C-202ENST00000475427 RPL13AP3Q6NVV1 102 aa-2.12□□□□□ -2.75
PDE6C-202ENST00000475427 LZICQ8WZA0 190 aa-2.12□□□□□ -2.75
PDE6C-202ENST00000475427 ROCK2O75116 1388 aaKnown RBP-2.12□□□□□ -2.75
PDE6C-202ENST00000475427 NEXMIFQ5QGS0 1516 aa-2.12□□□□□ -2.75
PDE6C-202ENST00000475427 FOCADQ5VW36 1801 aa-2.12□□□□□ -2.75
PDE6C-202ENST00000475427 MYOM2P54296 1465 aa-2.13□□□□□ -2.75
PDE6C-202ENST00000475427 TJP1Q07157 1748 aa-2.13□□□□□ -2.75
PDE6C-202ENST00000475427 EEA1Q15075 1411 aa-2.13□□□□□ -2.75
PDE6C-202ENST00000475427 H3BQ15 152 aa-2.13□□□□□ -2.75
PDE6C-202ENST00000475427 MRPL33O75394 65 aaKnown RBP-2.13□□□□□ -2.75
PDE6C-202ENST00000475427 IFI27P40305 119 aaPredicted RBP-2.13□□□□□ -2.75
PDE6C-202ENST00000475427 KIF14Q15058 1648 aa-2.13□□□□□ -2.75
PDE6C-202ENST00000475427 PREX2Q70Z35 1606 aa-2.13□□□□□ -2.75
PDE6C-202ENST00000475427 RICTORQ6R327 1708 aa-2.14□□□□□ -2.75
PDE6C-202ENST00000475427 NDUFB1O75438 58 aa-2.14□□□□□ -2.75
PDE6C-202ENST00000475427 FABP1P07148 127 aa-2.14□□□□□ -2.75
PDE6C-202ENST00000475427 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.14□□□□□ -2.75
PDE6C-202ENST00000475427 ARFGEF2Q9Y6D5 1785 aa-2.14□□□□□ -2.75
PDE6C-202ENST00000475427 NAIPQ13075 1403 aa-2.15□□□□□ -2.75
PDE6C-202ENST00000475427 ABCA3Q99758 1704 aa-2.16□□□□□ -2.75
PDE6C-202ENST00000475427 GNG7O60262 68 aa-2.16□□□□□ -2.76
PDE6C-202ENST00000475427 LINC00032P0C843 101 aa-2.16□□□□□ -2.76
PDE6C-202ENST00000475427 AKAIN1P0CW23 69 aa-2.16□□□□□ -2.76
PDE6C-202ENST00000475427 SMIM15Q7Z3B0 74 aa-2.16□□□□□ -2.76
PDE6C-202ENST00000475427 SVBPQ8N300 66 aa-2.16□□□□□ -2.76
PDE6C-202ENST00000475427 CLASP1Q7Z460 1538 aa-2.17□□□□□ -2.76
PDE6C-202ENST00000475427 INO80Q9ULG1 1556 aaPredicted RBP-2.17□□□□□ -2.76
PDE6C-202ENST00000475427 UMAD1C9J7I0 102 aa-2.17□□□□□ -2.76
PDE6C-202ENST00000475427 S100A8P05109 93 aa-2.17□□□□□ -2.76
PDE6C-202ENST00000475427 LINC00470Q9BZP3 86 aa-2.17□□□□□ -2.76
PDE6C-202ENST00000475427 FAM208AQ9UK61 1670 aaKnown RBP-2.18□□□□□ -2.76
PDE6C-202ENST00000475427 CCDC88BA6NC98 1476 aa-2.18□□□□□ -2.76
PDE6C-202ENST00000475427 GNGT2O14610 69 aa-2.18□□□□□ -2.76
PDE6C-202ENST00000475427 HMGN2P05204 90 aaKnown RBP-2.18□□□□□ -2.76
PDE6C-202ENST00000475427 SELENOWP63302 87 aa-2.18□□□□□ -2.76
PDE6C-202ENST00000475427 RNF17Q9BXT8 1623 aaKnown RBP-2.18□□□□□ -2.76
PDE6C-202ENST00000475427 CLTCQ00610 1675 aaKnown RBP-2.18□□□□□ -2.76
PDE6C-202ENST00000475427 ASPMQ8IZT6 3477 aa-2.19□□□□□ -2.76
PDE6C-202ENST00000475427 ARHGAP35Q9NRY4 1499 aa-2.19□□□□□ -2.76
PDE6C-202ENST00000475427 UQCRHLA0A096LP55 91 aa-2.19□□□□□ -2.76
PDE6C-202ENST00000475427 GNG14A0A1W2PPG7 69 aa-2.19□□□□□ -2.76
PDE6C-202ENST00000475427 SNAPC5O75971 98 aa-2.19□□□□□ -2.76
PDE6C-202ENST00000475427 PYDC1Q8WXC3 89 aa-2.19□□□□□ -2.76
PDE6C-202ENST00000475427 DPY30Q9C005 99 aa-2.19□□□□□ -2.76
PDE6C-202ENST00000475427 KCNQ1DNQ9H478 68 aa-2.19□□□□□ -2.76
PDE6C-202ENST00000475427 KAAG1Q9UBP8 84 aa-2.19□□□□□ -2.76
PDE6C-202ENST00000475427 MYO5CQ9NQX4 1742 aa-2.2□□□□□ -2.76
PDE6C-202ENST00000475427 CENPFP49454 3210 aa-2.2□□□□□ -2.76
PDE6C-202ENST00000475427 ATOX1O00244 68 aa-2.2□□□□□ -2.76
PDE6C-202ENST00000475427 PMCHL2Q9BQD1 86 aa-2.2□□□□□ -2.76
PDE6C-202ENST00000475427 UBL5Q9BZL1 73 aa-2.2□□□□□ -2.76
PDE6C-202ENST00000475427 NRKQ7Z2Y5 1582 aa-2.2□□□□□ -2.76
PDE6C-202ENST00000475427 C20orf202A1L168 122 aa-2.21□□□□□ -2.76
PDE6C-202ENST00000475427 HFM1A2PYH4 1435 aa-2.21□□□□□ -2.76
PDE6C-202ENST00000475427 UACAQ9BZF9 1416 aa-2.21□□□□□ -2.76
PDE6C-202ENST00000475427 ABRACLQ9P1F3 81 aa-2.21□□□□□ -2.76
PDE6C-202ENST00000475427 IER3IP1Q9Y5U9 82 aa-2.21□□□□□ -2.76
PDE6C-202ENST00000475427 POLR2KP53803 58 aaKnown RBP-2.22□□□□□ -2.76
PDE6C-202ENST00000475427 NREPQ16612 68 aa-2.22□□□□□ -2.76
PDE6C-202ENST00000475427 KRTAP19-2Q3LHN2 52 aa-2.22□□□□□ -2.76
PDE6C-202ENST00000475427 COL5A1-AS1Q5SY13 56 aa-2.22□□□□□ -2.76
PDE6C-202ENST00000475427 FAM107BQ9H098 131 aa-2.22□□□□□ -2.76
PDE6C-202ENST00000475427 URB2Q14146 1524 aaKnown RBP-2.22□□□□□ -2.77
PDE6C-202ENST00000475427 MYMXA0A1B0GTQ4 84 aa-2.23□□□□□ -2.77
PDE6C-202ENST00000475427 FANCAO15360 1455 aa-2.23□□□□□ -2.77
PDE6C-202ENST00000475427 EPRSP07814 1512 aaKnown RBP-2.23□□□□□ -2.77
PDE6C-202ENST00000475427 CDH23Q9H251 3354 aa-2.23□□□□□ -2.77
PDE6C-202ENST00000475427 UNC13AQ9UPW8 1703 aa-2.24□□□□□ -2.77
PDE6C-202ENST00000475427 ETDCA0A1B0GVM5 59 aa-2.24□□□□□ -2.77
PDE6C-202ENST00000475427 FAUP35544 74 aaKnown RBP-2.24□□□□□ -2.77
PDE6C-202ENST00000475427 SMIM11AP58511 58 aa-2.24□□□□□ -2.77
PDE6C-202ENST00000475427 SARNPP82979 210 aaKnown RBP-2.24□□□□□ -2.77
PDE6C-202ENST00000475427 NALCNQ8IZF0 1738 aa-2.25□□□□□ -2.77
PDE6C-202ENST00000475427 PZPP20742 1482 aa-2.25□□□□□ -2.77
PDE6C-202ENST00000475427 RBP2P50120 134 aa-2.25□□□□□ -2.77
PDE6C-202ENST00000475427 PEA15Q15121 130 aa-2.25□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms