RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 KRTAP26-1Q6PEX3 210 aa5.97□□□□□ -1.45
CDH23-211ENST00000475158 LINC00304Q8N9R0 145 aa5.97□□□□□ -1.45
CDH23-211ENST00000475158 LINC01558Q9Y6Z2 57 aa5.96□□□□□ -1.46
CDH23-211ENST00000475158 SRRM2Q9UQ35 2752 aaKnown RBP5.96□□□□□ -1.46
CDH23-211ENST00000475158 IGLV7-46A0A075B6I9 117 aa5.95□□□□□ -1.46
CDH23-211ENST00000475158 OTOGQ6ZRI0 2925 aa5.95□□□□□ -1.46
CDH23-211ENST00000475158 Q8N1X5 172 aa5.94□□□□□ -1.46
CDH23-211ENST00000475158 SPRR1AP35321 89 aa5.93□□□□□ -1.46
CDH23-211ENST00000475158 PANO1I0J062 215 aa5.92□□□□□ -1.46
CDH23-211ENST00000475158 TGP01266 2768 aa5.9□□□□□ -1.47
CDH23-211ENST00000475158 ADM2Q7Z4H4 148 aa5.9□□□□□ -1.47
CDH23-211ENST00000475158 A6NN06 94 aa5.89□□□□□ -1.47
CDH23-211ENST00000475158 HRES1P13985 223 aa5.88□□□□□ -1.47
CDH23-211ENST00000475158 TENM2Q9NT68 2774 aa5.88□□□□□ -1.47
CDH23-211ENST00000475158 NBPF19A0A087WUL8 3843 aa5.88□□□□□ -1.47
CDH23-211ENST00000475158 CRIPTQ9P021 101 aa5.88□□□□□ -1.47
CDH23-211ENST00000475158 ZCCHC13Q8WW36 166 aaKnown RBP5.85□□□□□ -1.47
CDH23-211ENST00000475158 AKAP9Q99996 3911 aa5.85□□□□□ -1.47
CDH23-211ENST00000475158 MMP24-AS1A0A0U1RRL7 71 aa5.84□□□□□ -1.47
CDH23-211ENST00000475158 KRTAP10-2P60368 255 aa5.84□□□□□ -1.48
CDH23-211ENST00000475158 LINC00472Q9H8W2 130 aa5.82□□□□□ -1.48
CDH23-211ENST00000475158 J3QL48 77 aa5.81□□□□□ -1.48
CDH23-211ENST00000475158 KRTAP11-1Q8IUC1 163 aa5.81□□□□□ -1.48
CDH23-211ENST00000475158 PLAC8Q9NZF1 115 aa5.81□□□□□ -1.48
CDH23-211ENST00000475158 KRTAP4-16G5E9R7 235 aaPredicted RBP5.8□□□□□ -1.48
CDH23-211ENST00000475158 A0A0D9SG42 100 aa5.78□□□□□ -1.48
CDH23-211ENST00000475158 KRTAP10-1P60331 282 aa5.78□□□□□ -1.48
CDH23-211ENST00000475158 KRTAP7-1Q8IUC3 87 aa5.77□□□□□ -1.49
CDH23-211ENST00000475158 SPRR1BP22528 89 aa5.76□□□□□ -1.49
CDH23-211ENST00000475158 COX6B2Q6YFQ2 88 aa5.74□□□□□ -1.49
CDH23-211ENST00000475158 A0A087X002 238 aa5.72□□□□□ -1.49
CDH23-211ENST00000475158 NOTCH2NLQ7Z3S9 236 aa5.72□□□□□ -1.49
CDH23-211ENST00000475158 LCE6AA0A183 80 aa5.7□□□□□ -1.5
CDH23-211ENST00000475158 Q5W150 140 aa5.7□□□□□ -1.5
CDH23-211ENST00000475158 KRTAP29-1A8MX34 341 aaPredicted RBP5.7□□□□□ -1.5
CDH23-211ENST00000475158 A0A1B0GU33 70 aa5.68□□□□□ -1.5
CDH23-211ENST00000475158 Q6ZR54 194 aa5.67□□□□□ -1.5
CDH23-211ENST00000475158 Q6ZRN7 208 aaPredicted RBP5.65□□□□□ -1.51
CDH23-211ENST00000475158 SPATA8Q6RVD6 105 aa5.63□□□□□ -1.51
CDH23-211ENST00000475158 ASB16-AS1Q495Z4 193 aa5.62□□□□□ -1.51
CDH23-211ENST00000475158 Q6ZSA8 131 aa5.61□□□□□ -1.51
CDH23-211ENST00000475158 FBN3Q75N90 2809 aa5.6□□□□□ -1.51
CDH23-211ENST00000475158 KRTAP16-1A8MUX0 517 aa5.6□□□□□ -1.51
CDH23-211ENST00000475158 LINC00483Q53H64 154 aa5.6□□□□□ -1.51
CDH23-211ENST00000475158 DMAC1Q96GE9 116 aa5.59□□□□□ -1.51
CDH23-211ENST00000475158 ROMO1P60602 79 aa5.59□□□□□ -1.51
CDH23-211ENST00000475158 NDUFAF8A1L188 74 aa5.58□□□□□ -1.52
CDH23-211ENST00000475158 TRRAPQ9Y4A5 3859 aa5.58□□□□□ -1.52
CDH23-211ENST00000475158 COL7A1Q02388 2944 aa5.57□□□□□ -1.52
CDH23-211ENST00000475158 Q5VSD8 79 aa5.57□□□□□ -1.52
CDH23-211ENST00000475158 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
CDH23-211ENST00000475158 LUZP6Q538Z0 58 aa5.54□□□□□ -1.52
CDH23-211ENST00000475158 A0A0A0MQY5 61 aa5.53□□□□□ -1.52
CDH23-211ENST00000475158 KRTAP13-2Q52LG2 175 aa5.52□□□□□ -1.53
CDH23-211ENST00000475158 KRTAP13-1Q8IUC0 172 aa5.51□□□□□ -1.53
CDH23-211ENST00000475158 ZNF469Q96JG9 3925 aaPredicted RBP5.49□□□□□ -1.53
CDH23-211ENST00000475158 A8MUU9 505 aa5.45□□□□□ -1.54
CDH23-211ENST00000475158 S4R3F8 94 aa5.45□□□□□ -1.54
CDH23-211ENST00000475158 M0R2T5 61 aa5.43□□□□□ -1.54
CDH23-211ENST00000475158 CAMK2N1Q7Z7J9 78 aa5.43□□□□□ -1.54
CDH23-211ENST00000475158 RPL37P61927 97 aaKnown RBP5.42□□□□□ -1.54
CDH23-211ENST00000475158 MEGF8Q7Z7M0 2845 aa5.42□□□□□ -1.54
CDH23-211ENST00000475158 H1FX-AS1Q4G0G2 97 aa5.42□□□□□ -1.54
CDH23-211ENST00000475158 R4GN34 69 aa5.39□□□□□ -1.55
CDH23-211ENST00000475158 CSMD3Q7Z407 3707 aa5.38□□□□□ -1.55
CDH23-211ENST00000475158 C20orf166-AS1Q96NR2 134 aa5.35□□□□□ -1.55
CDH23-211ENST00000475158 M0QZ58 72 aa5.32□□□□□ -1.56
CDH23-211ENST00000475158 SEC61BP60468 96 aaKnown RBP5.31□□□□□ -1.56
CDH23-211ENST00000475158 KRTAP1-4P0C5Y4 121 aa5.29□□□□□ -1.56
CDH23-211ENST00000475158 C10orf95Q9H7T3 257 aa5.28□□□□□ -1.56
CDH23-211ENST00000475158 ANK3Q12955 4377 aaKnown RBP5.23□□□□□ -1.57
CDH23-211ENST00000475158 H0YAA0 97 aa5.22□□□□□ -1.57
CDH23-211ENST00000475158 RPS29P62273 56 aaKnown RBP5.2□□□□□ -1.58
CDH23-211ENST00000475158 XP32Q5T750 250 aa5.1□□□□□ -1.59
CDH23-211ENST00000475158 P0C880 135 aa5.09□□□□□ -1.59
CDH23-211ENST00000475158 KRTAP21-3Q3LHN1 58 aa5.09□□□□□ -1.59
CDH23-211ENST00000475158 LCE2DQ5TA82 110 aaPredicted RBP5.04□□□□□ -1.6
CDH23-211ENST00000475158 LYSTQ99698 3801 aa5.02□□□□□ -1.61
CDH23-211ENST00000475158 ANK2Q01484 3957 aa5.02□□□□□ -1.61
CDH23-211ENST00000475158 PLAC4Q8WY50 150 aa5.02□□□□□ -1.61
CDH23-211ENST00000475158 A0A1B0GVY2 172 aa5.01□□□□□ -1.61
CDH23-211ENST00000475158 KRTAP13-3Q3SY46 172 aa4.99□□□□□ -1.61
CDH23-211ENST00000475158 TPRXLQ17RH7 258 aa4.96□□□□□ -1.62
CDH23-211ENST00000475158 KRTAP3-3Q9BYR6 98 aa4.93□□□□□ -1.62
CDH23-211ENST00000475158 KRTAP3-2Q9BYR7 98 aa4.93□□□□□ -1.62
CDH23-211ENST00000475158 KRTAP10-8P60410 259 aa4.92□□□□□ -1.62
CDH23-211ENST00000475158 DNAH10Q8IVF4 4471 aa4.92□□□□□ -1.62
CDH23-211ENST00000475158 HUWE1Q7Z6Z7 4374 aaKnown RBP4.84□□□□□ -1.63
CDH23-211ENST00000475158 KRTAP3-1Q9BYR8 98 aa4.83□□□□□ -1.64
CDH23-211ENST00000475158 DNHD1Q96M86 4753 aa4.82□□□□□ -1.64
CDH23-211ENST00000475158 TNP1P09430 55 aa4.81□□□□□ -1.64
CDH23-211ENST00000475158 KRTAP12-2P59991 146 aa4.77□□□□□ -1.65
CDH23-211ENST00000475158 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
CDH23-211ENST00000475158 FRAS1Q86XX4 4008 aa4.75□□□□□ -1.65
CDH23-211ENST00000475158 KRTAP10-10P60014 251 aa4.75□□□□□ -1.65
CDH23-211ENST00000475158 DNAH9Q9NYC9 4486 aa4.74□□□□□ -1.65
CDH23-211ENST00000475158 DNAH7Q8WXX0 4024 aa4.74□□□□□ -1.65
CDH23-211ENST00000475158 KRTAP13-4Q3LI77 160 aa4.7□□□□□ -1.66
CDH23-211ENST00000475158 CMYA5Q8N3K9 4069 aa4.7□□□□□ -1.66
CDH23-211ENST00000475158 PP632Q6XCG6 107 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms