RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 PRO0461Q9UI25 63 aa6.54□□□□□ -1.36
CLIP2-204ENST00000474962 SEC61BP60468 96 aaKnown RBP6.52□□□□□ -1.37
CLIP2-204ENST00000474962 LOC100996750A0A140TA64 210 aa6.51□□□□□ -1.37
CLIP2-204ENST00000474962 SIGMAR1Q99720 223 aa6.51□□□□□ -1.37
CLIP2-204ENST00000474962 KRTAP4-6Q9BYQ5 205 aa6.51□□□□□ -1.37
CLIP2-204ENST00000474962 A0A1B0GV90 55 aa6.5□□□□□ -1.37
CLIP2-204ENST00000474962 C9orf92A6NGG3 77 aa6.5□□□□□ -1.37
CLIP2-204ENST00000474962 IGKV4-1P06312 121 aa6.5□□□□□ -1.37
CLIP2-204ENST00000474962 NREPQ16612 68 aa6.49□□□□□ -1.37
CLIP2-204ENST00000474962 ETDBQ3ZM63 59 aa6.49□□□□□ -1.37
CLIP2-204ENST00000474962 DEFB116Q30KQ4 102 aa6.48□□□□□ -1.37
CLIP2-204ENST00000474962 Q96NJ1 140 aa6.47□□□□□ -1.37
CLIP2-204ENST00000474962 LINC00472Q9H8W2 130 aa6.47□□□□□ -1.37
CLIP2-204ENST00000474962 J3KT08 172 aa6.46□□□□□ -1.38
CLIP2-204ENST00000474962 NDUFB1O75438 58 aa6.44□□□□□ -1.38
CLIP2-204ENST00000474962 CRCT1Q9UGL9 99 aa6.43□□□□□ -1.38
CLIP2-204ENST00000474962 UBL5Q9BZL1 73 aa6.42□□□□□ -1.38
CLIP2-204ENST00000474962 IGHV6-1A0A0B4J1U7 121 aa6.41□□□□□ -1.38
CLIP2-204ENST00000474962 LINC00313P59037 77 aa6.41□□□□□ -1.38
CLIP2-204ENST00000474962 PCOTHQ58A44 107 aa6.41□□□□□ -1.38
CLIP2-204ENST00000474962 BPY2O14599 106 aa6.39□□□□□ -1.39
CLIP2-204ENST00000474962 DSCR10P59022 87 aa6.39□□□□□ -1.39
CLIP2-204ENST00000474962 KRTAP19-4Q3LI73 84 aa6.39□□□□□ -1.39
CLIP2-204ENST00000474962 A0A1B0GVX0 72 aa6.38□□□□□ -1.39
CLIP2-204ENST00000474962 Q6ZVQ6 151 aa6.38□□□□□ -1.39
CLIP2-204ENST00000474962 FSIP2Q5CZC0 6907 aa6.37□□□□□ -1.39
CLIP2-204ENST00000474962 A8MWP4 228 aa6.37□□□□□ -1.39
CLIP2-204ENST00000474962 C8orf87E5RJ46 101 aa6.37□□□□□ -1.39
CLIP2-204ENST00000474962 KRTAP19-2Q3LHN2 52 aa6.37□□□□□ -1.39
CLIP2-204ENST00000474962 LINC00846Q9NV44 126 aa6.37□□□□□ -1.39
CLIP2-204ENST00000474962 ACYP1P07311 99 aa6.36□□□□□ -1.39
CLIP2-204ENST00000474962 RPL37P61927 97 aaKnown RBP6.33□□□□□ -1.4
CLIP2-204ENST00000474962 ATP11AUNQ6ZP68 121 aa6.33□□□□□ -1.4
CLIP2-204ENST00000474962 PRR15Q8IV56 129 aa6.33□□□□□ -1.4
CLIP2-204ENST00000474962 IGKV3D-7A0A0C4DH55 119 aa6.32□□□□□ -1.4
CLIP2-204ENST00000474962 J3QR89 54 aa6.32□□□□□ -1.4
CLIP2-204ENST00000474962 SVIPQ8NHG7 77 aa6.32□□□□□ -1.4
CLIP2-204ENST00000474962 MT1HP80294 61 aa6.31□□□□□ -1.4
CLIP2-204ENST00000474962 Q75L30 129 aa6.31□□□□□ -1.4
CLIP2-204ENST00000474962 NOTCH2NLQ7Z3S9 236 aa6.31□□□□□ -1.4
CLIP2-204ENST00000474962 C8orf17Q9NRJ1 99 aa6.31□□□□□ -1.4
CLIP2-204ENST00000474962 FAM240AA0A1B0GVK7 77 aa6.3□□□□□ -1.4
CLIP2-204ENST00000474962 K7EQZ3 153 aa6.29□□□□□ -1.4
CLIP2-204ENST00000474962 C20orf166-AS1Q96NR2 134 aa6.29□□□□□ -1.4
CLIP2-204ENST00000474962 A8MUU9 505 aa6.28□□□□□ -1.4
CLIP2-204ENST00000474962 KRTAP16-1A8MUX0 517 aa6.26□□□□□ -1.41
CLIP2-204ENST00000474962 CXCL6P80162 114 aa6.26□□□□□ -1.41
CLIP2-204ENST00000474962 Q8N9L7 120 aa6.26□□□□□ -1.41
CLIP2-204ENST00000474962 hDV103S1A0JD37 113 aa6.25□□□□□ -1.41
CLIP2-204ENST00000474962 FLGP20930 4061 aaPredicted RBP6.25□□□□□ -1.41
CLIP2-204ENST00000474962 TMEM254Q8TBM7 123 aa6.24□□□□□ -1.41
CLIP2-204ENST00000474962 MMP24-AS1A0A0U1RRL7 71 aa6.23□□□□□ -1.41
CLIP2-204ENST00000474962 NDUFS5O43920 106 aa6.23□□□□□ -1.41
CLIP2-204ENST00000474962 MRPL34Q9BQ48 92 aaKnown RBP6.23□□□□□ -1.41
CLIP2-204ENST00000474962 ATP5EP2Q5VTU8 51 aa6.22□□□□□ -1.41
CLIP2-204ENST00000474962 CASC2Q6XLA1 102 aa6.22□□□□□ -1.41
CLIP2-204ENST00000474962 WFDC13Q8IUB5 93 aa6.22□□□□□ -1.41
CLIP2-204ENST00000474962 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
CLIP2-204ENST00000474962 HCG22E2RYF7 251 aa6.2□□□□□ -1.42
CLIP2-204ENST00000474962 KRTAP10-6P60371 365 aaPredicted RBP6.2□□□□□ -1.42
CLIP2-204ENST00000474962 LINC00643Q86TS7 51 aa6.2□□□□□ -1.42
CLIP2-204ENST00000474962 Q8N9P0 234 aaPredicted RBP6.2□□□□□ -1.42
CLIP2-204ENST00000474962 K7ERU9 68 aa6.19□□□□□ -1.42
CLIP2-204ENST00000474962 M0R2T5 61 aa6.19□□□□□ -1.42
CLIP2-204ENST00000474962 HIST1H4AP62805 103 aaKnown RBP6.18□□□□□ -1.42
CLIP2-204ENST00000474962 COX6B2Q6YFQ2 88 aa6.18□□□□□ -1.42
CLIP2-204ENST00000474962 ZCCHC13Q8WW36 166 aaKnown RBP6.17□□□□□ -1.42
CLIP2-204ENST00000474962 KRTAP4-8Q9BYQ9 185 aa6.16□□□□□ -1.42
CLIP2-204ENST00000474962 KRTAP19-1Q8IUB9 90 aa6.14□□□□□ -1.43
CLIP2-204ENST00000474962 KRTAP9-7A8MTY7 169 aa6.12□□□□□ -1.43
CLIP2-204ENST00000474962 KRTAP4-12Q9BQ66 201 aa6.11□□□□□ -1.43
CLIP2-204ENST00000474962 TP53AIP1Q9HCN2 124 aa6.09□□□□□ -1.43
CLIP2-204ENST00000474962 KRTAP3-1Q9BYR8 98 aa6.07□□□□□ -1.44
CLIP2-204ENST00000474962 A0A087WVE0 104 aa6.06□□□□□ -1.44
CLIP2-204ENST00000474962 SPINK7P58062 85 aa6.06□□□□□ -1.44
CLIP2-204ENST00000474962 RBM12B-AS1Q9P1G2 102 aa6.04□□□□□ -1.44
CLIP2-204ENST00000474962 IGKV2D-30A0A075B6S6 120 aa6.03□□□□□ -1.44
CLIP2-204ENST00000474962 IGKV2-30P06310 120 aa6.03□□□□□ -1.44
CLIP2-204ENST00000474962 Q5W150 140 aa6.03□□□□□ -1.44
CLIP2-204ENST00000474962 FAM236DA0A1B0GTK5 79 aa6.02□□□□□ -1.45
CLIP2-204ENST00000474962 FAM236CP0DP71 79 aa6.02□□□□□ -1.45
CLIP2-204ENST00000474962 SCGB1A1P11684 91 aa6.01□□□□□ -1.45
CLIP2-204ENST00000474962 KRTAP9-1A8MXZ3 250 aaPredicted RBP6□□□□□ -1.45
CLIP2-204ENST00000474962 C7orf65Q6ZTY9 151 aa6□□□□□ -1.45
CLIP2-204ENST00000474962 IMUPQ9GZP8 106 aa6□□□□□ -1.45
CLIP2-204ENST00000474962 UQCRQO14949 82 aa5.99□□□□□ -1.45
CLIP2-204ENST00000474962 MT-ATP8P03928 68 aa5.99□□□□□ -1.45
CLIP2-204ENST00000474962 HRES1P13985 223 aa5.98□□□□□ -1.45
CLIP2-204ENST00000474962 KRTAP9-8Q9BYQ0 159 aa5.98□□□□□ -1.45
CLIP2-204ENST00000474962 TRAV22A0A0B4J277 110 aa5.97□□□□□ -1.45
CLIP2-204ENST00000474962 USH2AO75445 5202 aa5.96□□□□□ -1.46
CLIP2-204ENST00000474962 ATOX1O00244 68 aa5.94□□□□□ -1.46
CLIP2-204ENST00000474962 SSPOA2VEC9 5147 aa5.92□□□□□ -1.46
CLIP2-204ENST00000474962 H0Y9P7 68 aa5.92□□□□□ -1.46
CLIP2-204ENST00000474962 MP68P56378 58 aa5.92□□□□□ -1.46
CLIP2-204ENST00000474962 MPLKIPQ8TAP9 179 aa5.92□□□□□ -1.46
CLIP2-204ENST00000474962 LOC101927531A0A1B0GV80 90 aa5.91□□□□□ -1.46
CLIP2-204ENST00000474962 OCR1Q9BZK8 76 aa5.9□□□□□ -1.46
CLIP2-204ENST00000474962 FAM236AA0A1B0GUQ0 79 aa5.89□□□□□ -1.47
CLIP2-204ENST00000474962 FAM236BA0A1B0GV22 79 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms