RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SPACA4Q8TDM5 124 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 DIRC1Q969H9 104 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 SIGMAR1Q99720 223 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 TMEM126AQ9H061 195 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 LINC00846Q9NV44 126 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 ORMDL1Q9P0S3 153 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 IGLV1-50A0A075B6I6 118 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 IGLV5-48A0A075B6I7 105 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 A0A087WTM6 91 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 A0A087WVE0 104 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 LOC110117498A0A087WWA1 95 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 IGKV3D-7A0A0C4DH55 119 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 A0A0G2JQZ4 141 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 TRBV7-4A0A0J9YYF1 115 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 LOC107984640A0A0U1RRK4 108 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 FAM236AA0A1B0GUQ0 79 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 FAM236BA0A1B0GV22 79 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 hADV29S1A0JD25 119 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 C16orf90A8MZG2 172 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 J3QR89 54 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 HIST1H4AP62805 103 aaKnown RBP0.77□□□□□ -2.29
CCDC39-203ENST00000473854 HAMPP81172 84 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 PRLHP81277 87 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 DEFB116Q30KQ4 102 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 Q6JHZ5 121 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.77□□□□□ -2.29
CCDC39-203ENST00000473854 Q6ZQT0 140 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 Q6ZRX8 168 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 C9orf163Q8N9P6 203 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 RMI2Q96E14 147 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 KCNQ1DNQ9H478 68 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 CBY1Q9Y3M2 126 aa0.77□□□□□ -2.29
CCDC39-203ENST00000473854 ETDCA0A1B0GVM5 59 aa0.76□□□□□ -2.29
CCDC39-203ENST00000473854 A0A1W2PNM2 257 aa0.76□□□□□ -2.29
CCDC39-203ENST00000473854 C3orf84H3BNL1 204 aa0.76□□□□□ -2.29
CCDC39-203ENST00000473854 CCDC179H3BU77 68 aa0.76□□□□□ -2.29
CCDC39-203ENST00000473854 TMEM256-PLSCR3K7ERE1 68 aa0.76□□□□□ -2.29
CCDC39-203ENST00000473854 PSCAO43653 123 aa0.76□□□□□ -2.29
CCDC39-203ENST00000473854 CCKP06307 115 aa0.76□□□□□ -2.29
CCDC39-203ENST00000473854 INAFM2P0DMQ5 153 aa0.76□□□□□ -2.29
CCDC39-203ENST00000473854 SCGB1A1P11684 91 aa0.76□□□□□ -2.29
CCDC39-203ENST00000473854 UBE2BP63146 152 aa0.76□□□□□ -2.29
CCDC39-203ENST00000473854 LINC00483Q53H64 154 aa0.76□□□□□ -2.29
CCDC39-203ENST00000473854 Q5W150 140 aa0.76□□□□□ -2.29
CCDC39-203ENST00000473854 Q6Q795 121 aa0.76□□□□□ -2.29
CCDC39-203ENST00000473854 SCXQ7RTU7 201 aa0.76□□□□□ -2.29
CCDC39-203ENST00000473854 CAMK2N1Q7Z7J9 78 aa0.76□□□□□ -2.29
CCDC39-203ENST00000473854 LINC00643Q86TS7 51 aa0.76□□□□□ -2.29
CCDC39-203ENST00000473854 CYSTM1Q9H1C7 97 aa0.76□□□□□ -2.29
CCDC39-203ENST00000473854 PLAC8Q9NZF1 115 aa0.76□□□□□ -2.29
CCDC39-203ENST00000473854 JMJD7-PLA2G4BH0Y9G9 81 aa0.75□□□□□ -2.29
CCDC39-203ENST00000473854 BPY2O14599 106 aa0.75□□□□□ -2.29
CCDC39-203ENST00000473854 BCE1O60756 84 aa0.75□□□□□ -2.29
CCDC39-203ENST00000473854 SNCGO76070 127 aa0.75□□□□□ -2.29
CCDC39-203ENST00000473854 LY6G6CO95867 125 aa0.75□□□□□ -2.29
CCDC39-203ENST00000473854 ACYP1P07311 99 aa0.75□□□□□ -2.29
CCDC39-203ENST00000473854 SPRR1BP22528 89 aa0.75□□□□□ -2.29
CCDC39-203ENST00000473854 RBM3P98179 157 aaKnown RBP0.75□□□□□ -2.29
CCDC39-203ENST00000473854 Q6ZSA8 131 aa0.75□□□□□ -2.29
CCDC39-203ENST00000473854 FAM19A1Q7Z5A9 133 aa0.75□□□□□ -2.29
CCDC39-203ENST00000473854 DEFB105AQ8NG35 78 aa0.75□□□□□ -2.29
CCDC39-203ENST00000473854 SPRR4Q96PI1 79 aa0.75□□□□□ -2.29
CCDC39-203ENST00000473854 HIGD2AQ9BW72 106 aa0.75□□□□□ -2.29
CCDC39-203ENST00000473854 LAMTOR3Q9UHA4 124 aa0.75□□□□□ -2.29
CCDC39-203ENST00000473854 PSORS1C2Q9UIG4 136 aa0.75□□□□□ -2.29
CCDC39-203ENST00000473854 LCE6AA0A183 80 aa0.74□□□□□ -2.29
CCDC39-203ENST00000473854 A0A1B0GVX0 72 aa0.74□□□□□ -2.29
CCDC39-203ENST00000473854 H3BQ85 93 aa0.74□□□□□ -2.29
CCDC39-203ENST00000473854 K7EQZ3 153 aa0.74□□□□□ -2.29
CCDC39-203ENST00000473854 OXTP01178 125 aa0.74□□□□□ -2.29
CCDC39-203ENST00000473854 UBE2AP49459 152 aa0.74□□□□□ -2.29
CCDC39-203ENST00000473854 KRTAP10-4P60372 401 aaPredicted RBP0.74□□□□□ -2.29
CCDC39-203ENST00000473854 KRTAP13-4Q3LI77 160 aa0.74□□□□□ -2.29
CCDC39-203ENST00000473854 C1orf137Q5JT78 98 aa0.74□□□□□ -2.29
CCDC39-203ENST00000473854 C1orf134Q5TEV5 83 aa0.74□□□□□ -2.29
CCDC39-203ENST00000473854 ATP5EP2Q5VTU8 51 aa0.74□□□□□ -2.29
CCDC39-203ENST00000473854 KRTAP5-10Q6L8G5 202 aa0.74□□□□□ -2.29
CCDC39-203ENST00000473854 CIRBP-AS1Q8TBR5 109 aa0.74□□□□□ -2.29
CCDC39-203ENST00000473854 Q96NJ1 140 aa0.74□□□□□ -2.29
CCDC39-203ENST00000473854 DSCR8Q96T75 97 aa0.74□□□□□ -2.29
CCDC39-203ENST00000473854 ANAPC13Q9BS18 74 aa0.74□□□□□ -2.29
CCDC39-203ENST00000473854 IMUPQ9GZP8 106 aa0.74□□□□□ -2.29
CCDC39-203ENST00000473854 USH2AO75445 5202 aa0.74□□□□□ -2.29
CCDC39-203ENST00000473854 A0A087WSZ3 146 aa0.73□□□□□ -2.29
CCDC39-203ENST00000473854 MMP24-AS1A0A0U1RRL7 71 aa0.73□□□□□ -2.29
CCDC39-203ENST00000473854 F8WEM9 126 aa0.73□□□□□ -2.29
CCDC39-203ENST00000473854 ATOX1O00244 68 aa0.73□□□□□ -2.29
CCDC39-203ENST00000473854 IGLV7-43P04211 117 aa0.73□□□□□ -2.29
CCDC39-203ENST00000473854 CRYGAP11844 174 aa0.73□□□□□ -2.29
CCDC39-203ENST00000473854 COX7CP15954 63 aa0.73□□□□□ -2.29
CCDC39-203ENST00000473854 SEC61GP60059 68 aa0.73□□□□□ -2.29
CCDC39-203ENST00000473854 RPL37AP61513 92 aaKnown RBP0.73□□□□□ -2.29
CCDC39-203ENST00000473854 KRTAP6-3Q3LI67 103 aa0.73□□□□□ -2.29
CCDC39-203ENST00000473854 KRTAP13-2Q52LG2 175 aa0.73□□□□□ -2.29
CCDC39-203ENST00000473854 C5orf47Q569G3 176 aa0.73□□□□□ -2.29
CCDC39-203ENST00000473854 C9orf153Q5TBE3 101 aa0.73□□□□□ -2.29
CCDC39-203ENST00000473854 UBL5Q9BZL1 73 aa0.73□□□□□ -2.29
CCDC39-203ENST00000473854 LINC00472Q9H8W2 130 aa0.73□□□□□ -2.29
CCDC39-203ENST00000473854 LINC00474Q9P2X8 69 aa0.73□□□□□ -2.29
CCDC39-203ENST00000473854 SS18L2Q9UHA2 77 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms