RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 IFI27P40305 119 aaPredicted RBP-1.5□□□□□ -2.65
COMMD3-211ENST00000472673 DMXL2Q8TDJ6 3036 aa-1.5□□□□□ -2.65
COMMD3-211ENST00000472673 NCOA2Q15596 1464 aa-1.5□□□□□ -2.65
COMMD3-211ENST00000472673 TMEM131LA2VDJ0 1609 aa-1.51□□□□□ -2.65
COMMD3-211ENST00000472673 LY75O60449 1722 aa-1.51□□□□□ -2.65
COMMD3-211ENST00000472673 TJP1Q07157 1748 aa-1.51□□□□□ -2.65
COMMD3-211ENST00000472673 CCDC88BA6NC98 1476 aa-1.51□□□□□ -2.65
COMMD3-211ENST00000472673 ATMQ13315 3056 aa-1.51□□□□□ -2.65
COMMD3-211ENST00000472673 ITSN2Q9NZM3 1697 aa-1.51□□□□□ -2.65
COMMD3-211ENST00000472673 ANKRD26Q9UPS8 1709 aa-1.52□□□□□ -2.65
COMMD3-211ENST00000472673 TLN1Q9Y490 2541 aaKnown RBP-1.52□□□□□ -2.65
COMMD3-211ENST00000472673 GYPAP02724 150 aa-1.52□□□□□ -2.65
COMMD3-211ENST00000472673 WT1-ASQ06250 92 aa-1.52□□□□□ -2.65
COMMD3-211ENST00000472673 NCMAPQ5T1S8 102 aa-1.52□□□□□ -2.65
COMMD3-211ENST00000472673 CNTLNQ9NXG0 1405 aa-1.52□□□□□ -2.65
COMMD3-211ENST00000472673 UMAD1C9J7I0 102 aa-1.53□□□□□ -2.65
COMMD3-211ENST00000472673 RBP2P50120 134 aa-1.53□□□□□ -2.65
COMMD3-211ENST00000472673 URB2Q14146 1524 aaKnown RBP-1.53□□□□□ -2.65
COMMD3-211ENST00000472673 TCEAL7Q9BRU2 100 aa-1.53□□□□□ -2.65
COMMD3-211ENST00000472673 KIAA0586Q9BVV6 1533 aa-1.54□□□□□ -2.66
COMMD3-211ENST00000472673 CCNB3Q8WWL7 1395 aa-1.54□□□□□ -2.66
COMMD3-211ENST00000472673 DEFB131BA0A096LNP1 70 aa-1.54□□□□□ -2.66
COMMD3-211ENST00000472673 CEBPZOSA8MTT3 80 aa-1.54□□□□□ -2.66
COMMD3-211ENST00000472673 NDUFA4O00483 81 aa-1.54□□□□□ -2.66
COMMD3-211ENST00000472673 MT1GP13640 62 aa-1.54□□□□□ -2.66
COMMD3-211ENST00000472673 MT1MQ8N339 61 aa-1.54□□□□□ -2.66
COMMD3-211ENST00000472673 ACBD7Q8N6N7 88 aa-1.54□□□□□ -2.66
COMMD3-211ENST00000472673 C20orf78Q9BR46 151 aa-1.54□□□□□ -2.66
COMMD3-211ENST00000472673 RABAC1Q9UI14 185 aa-1.54□□□□□ -2.66
COMMD3-211ENST00000472673 AKAP12Q02952 1782 aa-1.54□□□□□ -2.66
COMMD3-211ENST00000472673 KIF1AQ12756 1690 aa-1.55□□□□□ -2.66
COMMD3-211ENST00000472673 HMGA1P17096 107 aaKnown RBP-1.55□□□□□ -2.66
COMMD3-211ENST00000472673 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.56□□□□□ -2.66
COMMD3-211ENST00000472673 CEP162Q5TB80 1403 aa-1.56□□□□□ -2.66
COMMD3-211ENST00000472673 MRPL33O75394 65 aaKnown RBP-1.56□□□□□ -2.66
COMMD3-211ENST00000472673 MT2AP02795 61 aa-1.56□□□□□ -2.66
COMMD3-211ENST00000472673 PIK3C2BO00750 1634 aa-1.56□□□□□ -2.66
COMMD3-211ENST00000472673 CFAP43Q8NDM7 1665 aa-1.57□□□□□ -2.66
COMMD3-211ENST00000472673 SNRPFP62306 86 aaKnown RBP-1.57□□□□□ -2.66
COMMD3-211ENST00000472673 BVES-AS1Q5T3Y7 98 aa-1.57□□□□□ -2.66
COMMD3-211ENST00000472673 LINC00643Q86TS7 51 aa-1.57□□□□□ -2.66
COMMD3-211ENST00000472673 PPLO60437 1756 aa-1.57□□□□□ -2.66
COMMD3-211ENST00000472673 NRAPQ86VF7 1730 aa-1.57□□□□□ -2.66
COMMD3-211ENST00000472673 NOP10Q9NPE3 64 aaKnown RBP-1.58□□□□□ -2.66
COMMD3-211ENST00000472673 RICTORQ6R327 1708 aa-1.58□□□□□ -2.66
COMMD3-211ENST00000472673 CDC42BPGQ6DT37 1551 aa-1.59□□□□□ -2.66
COMMD3-211ENST00000472673 LRRIQ1Q96JM4 1722 aa-1.59□□□□□ -2.66
COMMD3-211ENST00000472673 RPS27P42677 84 aaKnown RBP-1.59□□□□□ -2.66
COMMD3-211ENST00000472673 RPS27LQ71UM5 84 aaKnown RBP-1.59□□□□□ -2.66
COMMD3-211ENST00000472673 H3BUA1 57 aa-1.6□□□□□ -2.67
COMMD3-211ENST00000472673 M0R143 59 aa-1.6□□□□□ -2.67
COMMD3-211ENST00000472673 NREPQ16612 68 aa-1.6□□□□□ -2.67
COMMD3-211ENST00000472673 PYY3Q5JQD4 70 aa-1.6□□□□□ -2.67
COMMD3-211ENST00000472673 RNF17Q9BXT8 1623 aaKnown RBP-1.6□□□□□ -2.67
COMMD3-211ENST00000472673 MAST1Q9Y2H9 1570 aa-1.6□□□□□ -2.67
COMMD3-211ENST00000472673 MT1BP07438 61 aa-1.61□□□□□ -2.67
COMMD3-211ENST00000472673 CRIP1P50238 77 aa-1.61□□□□□ -2.67
COMMD3-211ENST00000472673 INO80Q9ULG1 1556 aaPredicted RBP-1.63□□□□□ -2.67
COMMD3-211ENST00000472673 MINOS1Q5TGZ0 78 aa-1.63□□□□□ -2.67
COMMD3-211ENST00000472673 KCNQ1DNQ9H478 68 aa-1.63□□□□□ -2.67
COMMD3-211ENST00000472673 A0A1B0GUL6 1792 aa-1.63□□□□□ -2.67
COMMD3-211ENST00000472673 MAP3K4Q9Y6R4 1608 aa-1.63□□□□□ -2.67
COMMD3-211ENST00000472673 S100A16Q96FQ6 103 aaKnown RBP-1.64□□□□□ -2.67
COMMD3-211ENST00000472673 UBL5Q9BZL1 73 aa-1.64□□□□□ -2.67
COMMD3-211ENST00000472673 ARHGAP35Q9NRY4 1499 aa-1.64□□□□□ -2.67
COMMD3-211ENST00000472673 KIF14Q15058 1648 aa-1.65□□□□□ -2.67
COMMD3-211ENST00000472673 ATP5EP2Q5VTU8 51 aa-1.65□□□□□ -2.67
COMMD3-211ENST00000472673 SNHG12Q9BXW3 62 aa-1.65□□□□□ -2.67
COMMD3-211ENST00000472673 HFM1A2PYH4 1435 aa-1.66□□□□□ -2.67
COMMD3-211ENST00000472673 CSMD2Q7Z408 3487 aa-1.66□□□□□ -2.67
COMMD3-211ENST00000472673 PVALEFA0A1B0GWK0 134 aa-1.66□□□□□ -2.68
COMMD3-211ENST00000472673 LINC01546A6NGU7 62 aa-1.66□□□□□ -2.68
COMMD3-211ENST00000472673 M0QZ58 72 aa-1.66□□□□□ -2.68
COMMD3-211ENST00000472673 NHSQ6T4R5 1651 aa-1.67□□□□□ -2.68
COMMD3-211ENST00000472673 RALGAPBQ86X10 1494 aa-1.67□□□□□ -2.68
COMMD3-211ENST00000472673 MYO5CQ9NQX4 1742 aa-1.67□□□□□ -2.68
COMMD3-211ENST00000472673 CRYBG3Q68DQ2 2970 aa-1.67□□□□□ -2.68
COMMD3-211ENST00000472673 FREM2Q5SZK8 3169 aa-1.67□□□□□ -2.68
COMMD3-211ENST00000472673 SMARCA2P51531 1590 aa-1.68□□□□□ -2.68
COMMD3-211ENST00000472673 PRUNE2Q8WUY3 3088 aa-1.68□□□□□ -2.68
COMMD3-211ENST00000472673 A0A087WXM4 84 aa-1.68□□□□□ -2.68
COMMD3-211ENST00000472673 KANTRA0A1W2PQU2 76 aa-1.68□□□□□ -2.68
COMMD3-211ENST00000472673 C6orf48Q9UBA6 75 aa-1.68□□□□□ -2.68
COMMD3-211ENST00000472673 ABCC3O15438 1527 aa-1.68□□□□□ -2.68
COMMD3-211ENST00000472673 VPS8Q8N3P4 1428 aa-1.68□□□□□ -2.68
COMMD3-211ENST00000472673 BOD1L1Q8NFC6 3051 aa-1.69□□□□□ -2.68
COMMD3-211ENST00000472673 M0QY20 66 aa-1.69□□□□□ -2.68
COMMD3-211ENST00000472673 PKIAP61925 76 aa-1.69□□□□□ -2.68
COMMD3-211ENST00000472673 CFAP54Q96N23 3096 aa-1.69□□□□□ -2.68
COMMD3-211ENST00000472673 SMIM13P0DJ93 91 aa-1.7□□□□□ -2.68
COMMD3-211ENST00000472673 FCER1GP30273 86 aa-1.7□□□□□ -2.68
COMMD3-211ENST00000472673 DEFB121Q5J5C9 76 aa-1.7□□□□□ -2.68
COMMD3-211ENST00000472673 ETDCA0A1B0GVM5 59 aa-1.71□□□□□ -2.68
COMMD3-211ENST00000472673 A8MTW9 85 aa-1.71□□□□□ -2.68
COMMD3-211ENST00000472673 SFTA3P0C7M3 94 aa-1.71□□□□□ -2.68
COMMD3-211ENST00000472673 NCBP2-AS2Q69YL0 99 aa-1.71□□□□□ -2.68
COMMD3-211ENST00000472673 KDM5DQ9BY66 1539 aa-1.71□□□□□ -2.68
COMMD3-211ENST00000472673 CD163L1Q9NR16 1453 aa-1.72□□□□□ -2.68
COMMD3-211ENST00000472673 TTC37Q6PGP7 1564 aa-1.72□□□□□ -2.69
COMMD3-211ENST00000472673 DEFB4AO15263 64 aa-1.73□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms