RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 MUC12Q9UKN1 5478 aa4.5□□□□□ -1.69
VCL-204ENST00000472585 A0A087WSZ3 146 aa4.49□□□□□ -1.69
VCL-204ENST00000472585 A0A1B0GV90 55 aa4.49□□□□□ -1.69
VCL-204ENST00000472585 IGKV2-30P06310 120 aa4.49□□□□□ -1.69
VCL-204ENST00000472585 HSBP1L1C9JCN9 74 aa4.48□□□□□ -1.69
VCL-204ENST00000472585 TEN1Q86WV5 123 aa4.48□□□□□ -1.69
VCL-204ENST00000472585 MTURNQ8N3F0 131 aa4.48□□□□□ -1.69
VCL-204ENST00000472585 DLEU1O43261 78 aa4.47□□□□□ -1.69
VCL-204ENST00000472585 PPDPFLQ8WWR9 84 aa4.47□□□□□ -1.69
VCL-204ENST00000472585 SS18L2Q9UHA2 77 aa4.47□□□□□ -1.69
VCL-204ENST00000472585 A0A1W2PNM2 257 aa4.46□□□□□ -1.7
VCL-204ENST00000472585 COX8AP10176 69 aa4.46□□□□□ -1.7
VCL-204ENST00000472585 LINC00313P59037 77 aa4.46□□□□□ -1.7
VCL-204ENST00000472585 Q8N9P0 234 aaPredicted RBP4.46□□□□□ -1.7
VCL-204ENST00000472585 A8MWP4 228 aa4.45□□□□□ -1.7
VCL-204ENST00000472585 NDUFV3P56181 108 aaKnown RBP4.45□□□□□ -1.7
VCL-204ENST00000472585 COL5A1-AS1Q5SY13 56 aa4.45□□□□□ -1.7
VCL-204ENST00000472585 FAM218AQ96MZ4 157 aa4.45□□□□□ -1.7
VCL-204ENST00000472585 DEFB116Q30KQ4 102 aa4.43□□□□□ -1.7
VCL-204ENST00000472585 C2orf91Q6ZV80 131 aa4.43□□□□□ -1.7
VCL-204ENST00000472585 SIGMAR1Q99720 223 aa4.43□□□□□ -1.7
VCL-204ENST00000472585 HIGD1BQ9P298 99 aa4.43□□□□□ -1.7
VCL-204ENST00000472585 BVES-AS1Q5T3Y7 98 aa4.42□□□□□ -1.7
VCL-204ENST00000472585 H3BMG7 143 aa4.41□□□□□ -1.7
VCL-204ENST00000472585 IGKV4-1P06312 121 aa4.41□□□□□ -1.7
VCL-204ENST00000472585 BATFQ16520 125 aa4.4□□□□□ -1.71
VCL-204ENST00000472585 LINC00472Q9H8W2 130 aa4.4□□□□□ -1.71
VCL-204ENST00000472585 IGHV6-1A0A0B4J1U7 121 aa4.38□□□□□ -1.71
VCL-204ENST00000472585 KRTAP2-3P0C7H8 128 aa4.38□□□□□ -1.71
VCL-204ENST00000472585 SPINK7P58062 85 aa4.38□□□□□ -1.71
VCL-204ENST00000472585 KRTAP2-4Q9BYR9 128 aa4.38□□□□□ -1.71
VCL-204ENST00000472585 A6NN06 94 aa4.37□□□□□ -1.71
VCL-204ENST00000472585 TAX1BP3O14907 124 aa4.37□□□□□ -1.71
VCL-204ENST00000472585 HSD52Q0P140 79 aa4.37□□□□□ -1.71
VCL-204ENST00000472585 FABP2P12104 132 aa4.35□□□□□ -1.71
VCL-204ENST00000472585 UBE2V1Q13404 147 aa4.35□□□□□ -1.71
VCL-204ENST00000472585 CEND1Q8N111 149 aa4.35□□□□□ -1.71
VCL-204ENST00000472585 ZCCHC13Q8WW36 166 aaKnown RBP4.35□□□□□ -1.71
VCL-204ENST00000472585 HIST1H4GQ99525 98 aa4.35□□□□□ -1.71
VCL-204ENST00000472585 TRBV7-4A0A0J9YYF1 115 aa4.34□□□□□ -1.71
VCL-204ENST00000472585 H0YGX0 51 aa4.34□□□□□ -1.71
VCL-204ENST00000472585 MDN1Q9NU22 5596 aa4.34□□□□□ -1.71
VCL-204ENST00000472585 A0A1B0GV72 72 aa4.33□□□□□ -1.72
VCL-204ENST00000472585 KRTAP5-9P26371 169 aa4.32□□□□□ -1.72
VCL-204ENST00000472585 FXYD2P54710 66 aa4.32□□□□□ -1.72
VCL-204ENST00000472585 ANKRD29Q8N6D5 301 aa4.32□□□□□ -1.72
VCL-204ENST00000472585 KMT2DO14686 5537 aa4.31□□□□□ -1.72
VCL-204ENST00000472585 WFDC13Q8IUB5 93 aa4.31□□□□□ -1.72
VCL-204ENST00000472585 A0A1B0GVX0 72 aa4.3□□□□□ -1.72
VCL-204ENST00000472585 RAB37Q96AX2 223 aa4.3□□□□□ -1.72
VCL-204ENST00000472585 IGKV2D-30A0A075B6S6 120 aa4.29□□□□□ -1.72
VCL-204ENST00000472585 A0A0B4J2C4 111 aa4.29□□□□□ -1.72
VCL-204ENST00000472585 A0A1B0GX51 115 aa4.29□□□□□ -1.72
VCL-204ENST00000472585 C8orf87E5RJ46 101 aa4.29□□□□□ -1.72
VCL-204ENST00000472585 K7EP34 96 aa4.29□□□□□ -1.72
VCL-204ENST00000472585 A0A1W2PPM0 123 aa4.28□□□□□ -1.72
VCL-204ENST00000472585 SNCGO76070 127 aa4.28□□□□□ -1.72
VCL-204ENST00000472585 CCKP06307 115 aa4.28□□□□□ -1.72
VCL-204ENST00000472585 MT1BP07438 61 aa4.28□□□□□ -1.72
VCL-204ENST00000472585 LCE1AQ5T7P2 110 aa4.28□□□□□ -1.72
VCL-204ENST00000472585 GTF2H5Q6ZYL4 71 aa4.27□□□□□ -1.73
VCL-204ENST00000472585 K7ERJ3 54 aa4.26□□□□□ -1.73
VCL-204ENST00000472585 TRACP01848 142 aa4.26□□□□□ -1.73
VCL-204ENST00000472585 PRO1854Q9UHT4 67 aa4.25□□□□□ -1.73
VCL-204ENST00000472585 SPCS1Q9Y6A9 102 aa4.25□□□□□ -1.73
VCL-204ENST00000472585 H1FX-AS1Q4G0G2 97 aa4.24□□□□□ -1.73
VCL-204ENST00000472585 NAA38Q9BRA0 125 aaKnown RBP4.23□□□□□ -1.73
VCL-204ENST00000472585 ORMDL1Q9P0S3 153 aa4.23□□□□□ -1.73
VCL-204ENST00000472585 Q5VV11 94 aa4.22□□□□□ -1.73
VCL-204ENST00000472585 TMEM256-PLSCR3K7ERE1 68 aa4.21□□□□□ -1.74
VCL-204ENST00000472585 VPS25Q9BRG1 176 aa4.21□□□□□ -1.74
VCL-204ENST00000472585 KRTAP2-2Q9BYT5 123 aa4.21□□□□□ -1.74
VCL-204ENST00000472585 KRTAP2-1Q9BYU5 128 aa4.21□□□□□ -1.74
VCL-204ENST00000472585 C8orf17Q9NRJ1 99 aa4.21□□□□□ -1.74
VCL-204ENST00000472585 F8W1H4 67 aa4.2□□□□□ -1.74
VCL-204ENST00000472585 K7ERU9 68 aa4.2□□□□□ -1.74
VCL-204ENST00000472585 KRTAP10-5P60370 271 aa4.2□□□□□ -1.74
VCL-204ENST00000472585 PRO0461Q9UI25 63 aa4.2□□□□□ -1.74
VCL-204ENST00000472585 IGKV3D-7A0A0C4DH55 119 aa4.19□□□□□ -1.74
VCL-204ENST00000472585 SPRR2EP22531 72 aa4.19□□□□□ -1.74
VCL-204ENST00000472585 SPRR2BP35325 72 aa4.19□□□□□ -1.74
VCL-204ENST00000472585 SPRR2AP35326 72 aa4.19□□□□□ -1.74
VCL-204ENST00000472585 PCP4P48539 62 aa4.19□□□□□ -1.74
VCL-204ENST00000472585 KRTAP19-8Q3LI54 63 aa4.19□□□□□ -1.74
VCL-204ENST00000472585 LYRM7Q5U5X0 104 aa4.19□□□□□ -1.74
VCL-204ENST00000472585 Q6ZQT0 140 aa4.19□□□□□ -1.74
VCL-204ENST00000472585 FAM236AA0A1B0GUQ0 79 aa4.17□□□□□ -1.74
VCL-204ENST00000472585 FAM236BA0A1B0GV22 79 aa4.17□□□□□ -1.74
VCL-204ENST00000472585 J3KT08 172 aa4.17□□□□□ -1.74
VCL-204ENST00000472585 DNAL4O96015 105 aa4.17□□□□□ -1.74
VCL-204ENST00000472585 COX6CP09669 75 aa4.17□□□□□ -1.74
VCL-204ENST00000472585 H3BQ85 93 aa4.16□□□□□ -1.74
VCL-204ENST00000472585 SCGB1C2P0DMR2 95 aa4.16□□□□□ -1.74
VCL-204ENST00000472585 PSMB2P49721 201 aa4.16□□□□□ -1.74
VCL-204ENST00000472585 RBM3P98179 157 aaKnown RBP4.16□□□□□ -1.74
VCL-204ENST00000472585 Q6ZVQ6 151 aa4.16□□□□□ -1.74
VCL-204ENST00000472585 SVIPQ8NHG7 77 aa4.16□□□□□ -1.74
VCL-204ENST00000472585 SPRR2GQ9BYE4 73 aa4.16□□□□□ -1.74
VCL-204ENST00000472585 SPRR2FQ96RM1 72 aa4.15□□□□□ -1.75
VCL-204ENST00000472585 IMUPQ9GZP8 106 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms