RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 SPANXCQ9NY87 97 aa1.38□□□□□ -2.19
HDAC9-221ENST00000471887 LAMTOR3Q9UHA4 124 aa1.38□□□□□ -2.19
HDAC9-221ENST00000471887 TRBV7-6A0A0J9YX20 115 aa1.37□□□□□ -2.19
HDAC9-221ENST00000471887 TEX49A0A1B0GTD5 131 aa1.37□□□□□ -2.19
HDAC9-221ENST00000471887 C9orf92A6NGG3 77 aa1.37□□□□□ -2.19
HDAC9-221ENST00000471887 H7C2G1 150 aa1.37□□□□□ -2.19
HDAC9-221ENST00000471887 DPM2O94777 84 aa1.37□□□□□ -2.19
HDAC9-221ENST00000471887 LEPROTL1O95214 131 aa1.37□□□□□ -2.19
HDAC9-221ENST00000471887 HINT1P49773 126 aaPredicted RBP1.37□□□□□ -2.19
HDAC9-221ENST00000471887 COX6B2Q6YFQ2 88 aa1.37□□□□□ -2.19
HDAC9-221ENST00000471887 LINC00308Q8TCZ7 52 aa1.37□□□□□ -2.19
HDAC9-221ENST00000471887 M0R2T5 61 aa1.36□□□□□ -2.19
HDAC9-221ENST00000471887 IGKCP01834 107 aa1.36□□□□□ -2.19
HDAC9-221ENST00000471887 COX7BP24311 80 aa1.36□□□□□ -2.19
HDAC9-221ENST00000471887 AKR1D1P51857 326 aa1.36□□□□□ -2.19
HDAC9-221ENST00000471887 SVBPQ8N300 66 aa1.36□□□□□ -2.19
HDAC9-221ENST00000471887 HSPB8Q9UJY1 196 aa1.36□□□□□ -2.19
HDAC9-221ENST00000471887 MACF1Q9UPN3 7388 aaKnown RBP1.36□□□□□ -2.19
HDAC9-221ENST00000471887 TCL1BO95988 128 aa1.35□□□□□ -2.19
HDAC9-221ENST00000471887 APOC3P02656 99 aa1.35□□□□□ -2.19
HDAC9-221ENST00000471887 NDUFA5Q16718 116 aa1.35□□□□□ -2.19
HDAC9-221ENST00000471887 HRCT1Q6UXD1 115 aa1.35□□□□□ -2.19
HDAC9-221ENST00000471887 TRBV7-7A0A0K0K1E9 115 aa1.34□□□□□ -2.19
HDAC9-221ENST00000471887 ZNF815PA8K554 130 aa1.34□□□□□ -2.19
HDAC9-221ENST00000471887 H3BPC8 53 aa1.34□□□□□ -2.19
HDAC9-221ENST00000471887 SYS1-DBNDD2H3BUS1 97 aa1.34□□□□□ -2.19
HDAC9-221ENST00000471887 MT2AP02795 61 aa1.34□□□□□ -2.19
HDAC9-221ENST00000471887 TRGC2P03986 189 aa1.34□□□□□ -2.19
HDAC9-221ENST00000471887 IFITM1P13164 125 aa1.34□□□□□ -2.19
HDAC9-221ENST00000471887 NPC2P61916 151 aa1.34□□□□□ -2.19
HDAC9-221ENST00000471887 LINC01545Q5VT33 79 aa1.34□□□□□ -2.19
HDAC9-221ENST00000471887 Q6JHZ5 121 aa1.34□□□□□ -2.19
HDAC9-221ENST00000471887 ATP11AUNQ6ZP68 121 aa1.34□□□□□ -2.19
HDAC9-221ENST00000471887 OR13C6PQ8NH95 151 aa1.34□□□□□ -2.19
HDAC9-221ENST00000471887 COPS9Q8WXC6 57 aa1.34□□□□□ -2.19
HDAC9-221ENST00000471887 CLEC2BQ92478 149 aa1.34□□□□□ -2.19
HDAC9-221ENST00000471887 PMCHL2Q9BQD1 86 aa1.34□□□□□ -2.19
HDAC9-221ENST00000471887 NHP2Q9NX24 153 aaKnown RBP1.34□□□□□ -2.19
HDAC9-221ENST00000471887 C20orf202A1L168 122 aa1.33□□□□□ -2.2
HDAC9-221ENST00000471887 MT1FP04733 61 aa1.33□□□□□ -2.2
HDAC9-221ENST00000471887 Q6Q795 121 aa1.33□□□□□ -2.2
HDAC9-221ENST00000471887 PPDPFLQ8WWR9 84 aa1.33□□□□□ -2.2
HDAC9-221ENST00000471887 PRO2289Q9P1D8 64 aa1.33□□□□□ -2.2
HDAC9-221ENST00000471887 SYNE2Q8WXH0 6885 aaKnown RBP1.32□□□□□ -2.2
HDAC9-221ENST00000471887 TRAV13-2A0A0B4J235 113 aa1.32□□□□□ -2.2
HDAC9-221ENST00000471887 F8WEM9 126 aa1.32□□□□□ -2.2
HDAC9-221ENST00000471887 FABP4P15090 132 aa1.32□□□□□ -2.2
HDAC9-221ENST00000471887 KRTAP19-6Q3LI70 58 aa1.32□□□□□ -2.2
HDAC9-221ENST00000471887 DEFB105AQ8NG35 78 aa1.32□□□□□ -2.2
HDAC9-221ENST00000471887 NAA38Q9BRA0 125 aaKnown RBP1.32□□□□□ -2.2
HDAC9-221ENST00000471887 TTTY13Q9BZ97 58 aa1.32□□□□□ -2.2
HDAC9-221ENST00000471887 TRBV20-1A0A075B6N2 111 aa1.31□□□□□ -2.2
HDAC9-221ENST00000471887 HIST1H2BKO60814 126 aa1.31□□□□□ -2.2
HDAC9-221ENST00000471887 HIST1H2BJP06899 126 aa1.31□□□□□ -2.2
HDAC9-221ENST00000471887 HIST1H2BOP23527 126 aa1.31□□□□□ -2.2
HDAC9-221ENST00000471887 HIST1H2BBP33778 126 aa1.31□□□□□ -2.2
HDAC9-221ENST00000471887 HIST1H2BDP58876 126 aa1.31□□□□□ -2.2
HDAC9-221ENST00000471887 HIST1H2BCP62807 126 aa1.31□□□□□ -2.2
HDAC9-221ENST00000471887 HIST2H2BEQ16778 126 aa1.31□□□□□ -2.2
HDAC9-221ENST00000471887 OCIAD2Q56VL3 154 aa1.31□□□□□ -2.2
HDAC9-221ENST00000471887 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.31□□□□□ -2.2
HDAC9-221ENST00000471887 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.31□□□□□ -2.2
HDAC9-221ENST00000471887 LINC00575Q6W349 94 aa1.31□□□□□ -2.2
HDAC9-221ENST00000471887 SCGB1D4Q6XE38 83 aa1.31□□□□□ -2.2
HDAC9-221ENST00000471887 Q6ZQY7 126 aa1.31□□□□□ -2.2
HDAC9-221ENST00000471887 SMIM11BQ8TCY0 68 aa1.31□□□□□ -2.2
HDAC9-221ENST00000471887 HIST1H2BHQ93079 126 aa1.31□□□□□ -2.2
HDAC9-221ENST00000471887 OBSCN-AS1Q96MR7 158 aa1.31□□□□□ -2.2
HDAC9-221ENST00000471887 HIST1H2BNQ99877 126 aa1.31□□□□□ -2.2
HDAC9-221ENST00000471887 HIST1H2BMQ99879 126 aa1.31□□□□□ -2.2
HDAC9-221ENST00000471887 SS18L2Q9UHA2 77 aa1.31□□□□□ -2.2
HDAC9-221ENST00000471887 NEBP20929 6669 aa1.31□□□□□ -2.2
HDAC9-221ENST00000471887 hADV29S1A0JD25 119 aa1.3□□□□□ -2.2
HDAC9-221ENST00000471887 LST1O00453 97 aa1.3□□□□□ -2.2
HDAC9-221ENST00000471887 C3orf79P0CE67 100 aa1.3□□□□□ -2.2
HDAC9-221ENST00000471887 MUSTN1Q8IVN3 82 aa1.3□□□□□ -2.2
HDAC9-221ENST00000471887 Q96NJ1 140 aa1.3□□□□□ -2.2
HDAC9-221ENST00000471887 LINC00846Q9NV44 126 aa1.3□□□□□ -2.2
HDAC9-221ENST00000471887 BVES-AS1Q5T3Y7 98 aa1.29□□□□□ -2.2
HDAC9-221ENST00000471887 TEN1Q86WV5 123 aa1.29□□□□□ -2.2
HDAC9-221ENST00000471887 MUC12Q9UKN1 5478 aa1.28□□□□□ -2.2
HDAC9-221ENST00000471887 A0A087WSZ3 146 aa1.28□□□□□ -2.2
HDAC9-221ENST00000471887 A0A1B0GX51 115 aa1.28□□□□□ -2.2
HDAC9-221ENST00000471887 H3BUT2 72 aa1.28□□□□□ -2.2
HDAC9-221ENST00000471887 C2orf91Q6ZV80 131 aa1.28□□□□□ -2.2
HDAC9-221ENST00000471887 COA5Q86WW8 74 aa1.28□□□□□ -2.2
HDAC9-221ENST00000471887 SNHG12Q9BXW3 62 aa1.28□□□□□ -2.2
HDAC9-221ENST00000471887 FAM236DA0A1B0GTK5 79 aa1.27□□□□□ -2.21
HDAC9-221ENST00000471887 FAM236CP0DP71 79 aa1.27□□□□□ -2.21
HDAC9-221ENST00000471887 KRTDAPP60985 99 aa1.27□□□□□ -2.21
HDAC9-221ENST00000471887 TRBV7-4A0A0J9YYF1 115 aa1.26□□□□□ -2.21
HDAC9-221ENST00000471887 H0YGX0 51 aa1.26□□□□□ -2.21
HDAC9-221ENST00000471887 DLEU1O43261 78 aa1.26□□□□□ -2.21
HDAC9-221ENST00000471887 LINC00313P59037 77 aa1.26□□□□□ -2.21
HDAC9-221ENST00000471887 ATOH7Q8N100 152 aa1.26□□□□□ -2.21
HDAC9-221ENST00000471887 RAB37Q96AX2 223 aa1.26□□□□□ -2.21
HDAC9-221ENST00000471887 C12orf57Q99622 126 aa1.26□□□□□ -2.21
HDAC9-221ENST00000471887 SIGMAR1Q99720 223 aa1.26□□□□□ -2.21
HDAC9-221ENST00000471887 LINC00472Q9H8W2 130 aa1.26□□□□□ -2.21
HDAC9-221ENST00000471887 HSBP1L1C9JCN9 74 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms