RNA–Protein interactions for RNA: ENST00000468347.1

SHQ1-204, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-204ENST00000468347 KIF14Q15058 1648 aa-2.28□□□□□ -2.77
SHQ1-204ENST00000468347 NDUFA4O00483 81 aa-2.29□□□□□ -2.78
SHQ1-204ENST00000468347 S100PP25815 95 aa-2.29□□□□□ -2.78
SHQ1-204ENST00000468347 PFDN5Q99471 154 aa-2.29□□□□□ -2.78
SHQ1-204ENST00000468347 KTN1Q86UP2 1357 aaKnown RBP-2.29□□□□□ -2.78
SHQ1-204ENST00000468347 CCNB3Q8WWL7 1395 aa-2.29□□□□□ -2.78
SHQ1-204ENST00000468347 ABCC2Q92887 1545 aa-2.29□□□□□ -2.78
SHQ1-204ENST00000468347 SMIM15Q7Z3B0 74 aa-2.3□□□□□ -2.78
SHQ1-204ENST00000468347 UNC13AQ9UPW8 1703 aa-2.31□□□□□ -2.78
SHQ1-204ENST00000468347 CLTCQ00610 1675 aaKnown RBP-2.31□□□□□ -2.78
SHQ1-204ENST00000468347 UNC80Q8N2C7 3258 aa-2.31□□□□□ -2.78
SHQ1-204ENST00000468347 GNG14A0A1W2PPG7 69 aa-2.31□□□□□ -2.78
SHQ1-204ENST00000468347 H3BUA1 57 aa-2.31□□□□□ -2.78
SHQ1-204ENST00000468347 GNGT2O14610 69 aa-2.31□□□□□ -2.78
SHQ1-204ENST00000468347 SNAPC5O75971 98 aa-2.31□□□□□ -2.78
SHQ1-204ENST00000468347 BVES-AS1Q5T3Y7 98 aa-2.31□□□□□ -2.78
SHQ1-204ENST00000468347 C20orf78Q9BR46 151 aa-2.31□□□□□ -2.78
SHQ1-204ENST00000468347 LINC00470Q9BZP3 86 aa-2.31□□□□□ -2.78
SHQ1-204ENST00000468347 CENPHQ9H3R5 247 aa-2.31□□□□□ -2.78
SHQ1-204ENST00000468347 PAIP2BQ9ULR5 123 aaKnown RBP-2.31□□□□□ -2.78
SHQ1-204ENST00000468347 NALCNQ8IZF0 1738 aa-2.31□□□□□ -2.78
SHQ1-204ENST00000468347 RNF17Q9BXT8 1623 aaKnown RBP-2.31□□□□□ -2.78
SHQ1-204ENST00000468347 NEXMIFQ5QGS0 1516 aa-2.32□□□□□ -2.78
SHQ1-204ENST00000468347 ROCK2O75116 1388 aaKnown RBP-2.32□□□□□ -2.78
SHQ1-204ENST00000468347 KRTDAPP60985 99 aa-2.32□□□□□ -2.78
SHQ1-204ENST00000468347 C6orf48Q9UBA6 75 aa-2.32□□□□□ -2.78
SHQ1-204ENST00000468347 FAM208AQ9UK61 1670 aaKnown RBP-2.32□□□□□ -2.78
SHQ1-204ENST00000468347 AKAIN1P0CW23 69 aa-2.33□□□□□ -2.78
SHQ1-204ENST00000468347 PLGLAQ15195 96 aa-2.33□□□□□ -2.78
SHQ1-204ENST00000468347 ZNF720Q7Z2F6 126 aa-2.33□□□□□ -2.78
SHQ1-204ENST00000468347 SPANXCQ9NY87 97 aa-2.33□□□□□ -2.78
SHQ1-204ENST00000468347 DNAH12Q6ZR08 3092 aa-2.33□□□□□ -2.78
SHQ1-204ENST00000468347 NRKQ7Z2Y5 1582 aa-2.33□□□□□ -2.78
SHQ1-204ENST00000468347 MYO5CQ9NQX4 1742 aa-2.34□□□□□ -2.78
SHQ1-204ENST00000468347 DEFB131BA0A096LNP1 70 aa-2.34□□□□□ -2.78
SHQ1-204ENST00000468347 ALKAL2Q6UX46 152 aa-2.34□□□□□ -2.78
SHQ1-204ENST00000468347 PMCHL2Q9BQD1 86 aa-2.34□□□□□ -2.78
SHQ1-204ENST00000468347 CD163L1Q9NR16 1453 aa-2.34□□□□□ -2.78
SHQ1-204ENST00000468347 HMGN3Q15651 99 aa-2.35□□□□□ -2.79
SHQ1-204ENST00000468347 SVBPQ8N300 66 aa-2.35□□□□□ -2.79
SHQ1-204ENST00000468347 LZICQ8WZA0 190 aa-2.35□□□□□ -2.79
SHQ1-204ENST00000468347 NDUFC1O43677 76 aa-2.36□□□□□ -2.79
SHQ1-204ENST00000468347 MPC2O95563 127 aa-2.36□□□□□ -2.79
SHQ1-204ENST00000468347 CYB5AP00167 134 aa-2.36□□□□□ -2.79
SHQ1-204ENST00000468347 KAAG1Q9UBP8 84 aa-2.36□□□□□ -2.79
SHQ1-204ENST00000468347 PREX2Q70Z35 1606 aa-2.36□□□□□ -2.79
SHQ1-204ENST00000468347 AKAP12Q02952 1782 aa-2.36□□□□□ -2.79
SHQ1-204ENST00000468347 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.37□□□□□ -2.79
SHQ1-204ENST00000468347 CFAP43Q8NDM7 1665 aa-2.37□□□□□ -2.79
SHQ1-204ENST00000468347 H3BQ15 152 aa-2.37□□□□□ -2.79
SHQ1-204ENST00000468347 SELENOWP63302 87 aa-2.37□□□□□ -2.79
SHQ1-204ENST00000468347 MRPS10P82664 201 aaKnown RBP-2.37□□□□□ -2.79
SHQ1-204ENST00000468347 ACBD7Q8N6N7 88 aa-2.37□□□□□ -2.79
SHQ1-204ENST00000468347 THOC2Q8NI27 1593 aaKnown RBP-2.37□□□□□ -2.79
SHQ1-204ENST00000468347 PZPP20742 1482 aa-2.38□□□□□ -2.79
SHQ1-204ENST00000468347 HMGN2P05204 90 aaKnown RBP-2.38□□□□□ -2.79
SHQ1-204ENST00000468347 IFI27P40305 119 aaPredicted RBP-2.38□□□□□ -2.79
SHQ1-204ENST00000468347 TTTY10Q9BZA0 68 aa-2.38□□□□□ -2.79
SHQ1-204ENST00000468347 CLASP1Q7Z460 1538 aa-2.38□□□□□ -2.79
SHQ1-204ENST00000468347 ARHGAP35Q9NRY4 1499 aa-2.39□□□□□ -2.79
SHQ1-204ENST00000468347 UQCRHLA0A096LP55 91 aa-2.39□□□□□ -2.79
SHQ1-204ENST00000468347 UMAD1C9J7I0 102 aa-2.39□□□□□ -2.79
SHQ1-204ENST00000468347 FAUP35544 74 aaKnown RBP-2.39□□□□□ -2.79
SHQ1-204ENST00000468347 NREPQ16612 68 aa-2.39□□□□□ -2.79
SHQ1-204ENST00000468347 NHSQ6T4R5 1651 aa-2.39□□□□□ -2.79
SHQ1-204ENST00000468347 LOC400499M0QZD8 3231 aa-2.39□□□□□ -2.79
SHQ1-204ENST00000468347 ASPMQ8IZT6 3477 aa-2.39□□□□□ -2.79
SHQ1-204ENST00000468347 MYO3AQ8NEV4 1616 aa-2.39□□□□□ -2.79
SHQ1-204ENST00000468347 INO80Q9ULG1 1556 aaPredicted RBP-2.4□□□□□ -2.79
SHQ1-204ENST00000468347 NAIPQ13075 1403 aa-2.4□□□□□ -2.79
SHQ1-204ENST00000468347 COL5A1-AS1Q5SY13 56 aa-2.4□□□□□ -2.79
SHQ1-204ENST00000468347 RPL13AP3Q6NVV1 102 aa-2.4□□□□□ -2.79
SHQ1-204ENST00000468347 SPANXA1Q9NS26 97 aa-2.4□□□□□ -2.79
SHQ1-204ENST00000468347 VCANP13611 3396 aa-2.4□□□□□ -2.79
SHQ1-204ENST00000468347 TMEM203Q969S6 136 aa-2.41□□□□□ -2.8
SHQ1-204ENST00000468347 EPRSP07814 1512 aaKnown RBP-2.42□□□□□ -2.8
SHQ1-204ENST00000468347 ATOX1O00244 68 aa-2.42□□□□□ -2.8
SHQ1-204ENST00000468347 POLR2KP53803 58 aaKnown RBP-2.43□□□□□ -2.8
SHQ1-204ENST00000468347 PPP3R1P63098 170 aa-2.43□□□□□ -2.8
SHQ1-204ENST00000468347 KCNQ1DNQ9H478 68 aa-2.43□□□□□ -2.8
SHQ1-204ENST00000468347 MYMXA0A1B0GTQ4 84 aa-2.44□□□□□ -2.8
SHQ1-204ENST00000468347 MRPL33O75394 65 aaKnown RBP-2.44□□□□□ -2.8
SHQ1-204ENST00000468347 NDUFB1O75438 58 aa-2.44□□□□□ -2.8
SHQ1-204ENST00000468347 LINC00032P0C843 101 aa-2.44□□□□□ -2.8
SHQ1-204ENST00000468347 S100A1P23297 94 aa-2.44□□□□□ -2.8
SHQ1-204ENST00000468347 IER3IP1Q9Y5U9 82 aa-2.44□□□□□ -2.8
SHQ1-204ENST00000468347 UACAQ9BZF9 1416 aa-2.44□□□□□ -2.8
SHQ1-204ENST00000468347 URB2Q14146 1524 aaKnown RBP-2.45□□□□□ -2.8
SHQ1-204ENST00000468347 S100A8P05109 93 aa-2.45□□□□□ -2.8
SHQ1-204ENST00000468347 RBP2P50120 134 aa-2.45□□□□□ -2.8
SHQ1-204ENST00000468347 KRTAP19-2Q3LHN2 52 aa-2.45□□□□□ -2.8
SHQ1-204ENST00000468347 HFM1A2PYH4 1435 aa-2.45□□□□□ -2.8
SHQ1-204ENST00000468347 EEA1Q15075 1411 aa-2.45□□□□□ -2.8
SHQ1-204ENST00000468347 NDUFA2O43678 99 aa-2.46□□□□□ -2.8
SHQ1-204ENST00000468347 UBL5Q9BZL1 73 aa-2.46□□□□□ -2.8
SHQ1-204ENST00000468347 FANCAO15360 1455 aa-2.46□□□□□ -2.8
SHQ1-204ENST00000468347 CEBPZOSA8MTT3 80 aa-2.47□□□□□ -2.8
SHQ1-204ENST00000468347 GNG4P50150 75 aa-2.47□□□□□ -2.8
SHQ1-204ENST00000468347 PEA15Q15121 130 aa-2.47□□□□□ -2.8
SHQ1-204ENST00000468347 PYDC1Q8WXC3 89 aa-2.47□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms