RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 TMEM141Q96I45 108 aa3.05□□□□□ -1.92
PTCD3-207ENST00000467273 SMIM7Q9BQ49 75 aa3.05□□□□□ -1.92
PTCD3-207ENST00000467273 CDC42SE2Q9NRR3 84 aa3.05□□□□□ -1.92
PTCD3-207ENST00000467273 HIGD1BQ9P298 99 aa3.05□□□□□ -1.92
PTCD3-207ENST00000467273 NDUFA12Q9UI09 145 aa3.05□□□□□ -1.92
PTCD3-207ENST00000467273 TRAPPC1Q9Y5R8 145 aa3.05□□□□□ -1.92
PTCD3-207ENST00000467273 CTXND1A0A1B0GTU2 59 aa3.04□□□□□ -1.92
PTCD3-207ENST00000467273 NDUFA1O15239 70 aa3.04□□□□□ -1.92
PTCD3-207ENST00000467273 ROMO1P60602 79 aa3.04□□□□□ -1.92
PTCD3-207ENST00000467273 KRTAP19-2Q3LHN2 52 aa3.04□□□□□ -1.92
PTCD3-207ENST00000467273 KRTAP13-2Q52LG2 175 aa3.04□□□□□ -1.92
PTCD3-207ENST00000467273 C9orf129Q5T035 196 aaKnown RBP3.04□□□□□ -1.92
PTCD3-207ENST00000467273 TMEM136Q6ZRR5 245 aa3.04□□□□□ -1.92
PTCD3-207ENST00000467273 I3L3M4 83 aa3.03□□□□□ -1.92
PTCD3-207ENST00000467273 BCE1O60756 84 aa3.03□□□□□ -1.92
PTCD3-207ENST00000467273 ACYP1P07311 99 aa3.03□□□□□ -1.92
PTCD3-207ENST00000467273 FXYD2P54710 66 aa3.03□□□□□ -1.92
PTCD3-207ENST00000467273 BAGE2Q86Y30 109 aa3.03□□□□□ -1.92
PTCD3-207ENST00000467273 TRAV7A0A075B6U4 112 aa3.02□□□□□ -1.93
PTCD3-207ENST00000467273 A0A0B4J2C4 111 aa3.02□□□□□ -1.93
PTCD3-207ENST00000467273 TRBV6-5A0A0K0K1A5 114 aa3.02□□□□□ -1.93
PTCD3-207ENST00000467273 TRBV30A0A0K0K1B3 111 aa3.02□□□□□ -1.93
PTCD3-207ENST00000467273 TRBV10-2A0A0K0K1G8 114 aa3.02□□□□□ -1.93
PTCD3-207ENST00000467273 SDHAF1A6NFY7 115 aa3.02□□□□□ -1.93
PTCD3-207ENST00000467273 A8MUU9 505 aa3.02□□□□□ -1.93
PTCD3-207ENST00000467273 LYZL1Q6UWQ5 148 aa3.02□□□□□ -1.93
PTCD3-207ENST00000467273 CNFNQ9BYD5 112 aa3.02□□□□□ -1.93
PTCD3-207ENST00000467273 TRAV13-2A0A0B4J235 113 aa3.01□□□□□ -1.93
PTCD3-207ENST00000467273 H7BZZ5 65 aa3.01□□□□□ -1.93
PTCD3-207ENST00000467273 ZNF22P17026 224 aaPredicted RBP3.01□□□□□ -1.93
PTCD3-207ENST00000467273 KRTAP12-2P59991 146 aa3.01□□□□□ -1.93
PTCD3-207ENST00000467273 Q6ZQT0 140 aa3.01□□□□□ -1.93
PTCD3-207ENST00000467273 C6orf48Q9UBA6 75 aa3.01□□□□□ -1.93
PTCD3-207ENST00000467273 TMEM170BQ5T4T1 132 aa3□□□□□ -1.93
PTCD3-207ENST00000467273 RPL7L1Q6DKI1 246 aaKnown RBP3□□□□□ -1.93
PTCD3-207ENST00000467273 UNQ6190/PRO20217Q6UXQ8 127 aa3□□□□□ -1.93
PTCD3-207ENST00000467273 LINC00643Q86TS7 51 aa3□□□□□ -1.93
PTCD3-207ENST00000467273 CYP4F30PQ9H0H9 118 aa3□□□□□ -1.93
PTCD3-207ENST00000467273 C22orf24Q9Y442 160 aa3□□□□□ -1.93
PTCD3-207ENST00000467273 H3BPC8 53 aa2.99□□□□□ -1.93
PTCD3-207ENST00000467273 H7C2G1 150 aa2.99□□□□□ -1.93
PTCD3-207ENST00000467273 M0R2T5 61 aa2.99□□□□□ -1.93
PTCD3-207ENST00000467273 KRTAP13-1Q8IUC0 172 aa2.99□□□□□ -1.93
PTCD3-207ENST00000467273 RPL39LQ96EH5 51 aaKnown RBP2.99□□□□□ -1.93
PTCD3-207ENST00000467273 TIMM21Q9BVV7 248 aa2.99□□□□□ -1.93
PTCD3-207ENST00000467273 ANAPC11Q9NYG5 84 aa2.99□□□□□ -1.93
PTCD3-207ENST00000467273 TRBV10-3A0A0K0K1G6 114 aa2.98□□□□□ -1.93
PTCD3-207ENST00000467273 SPINK1P00995 79 aa2.98□□□□□ -1.93
PTCD3-207ENST00000467273 POLR2KP53803 58 aaKnown RBP2.98□□□□□ -1.93
PTCD3-207ENST00000467273 KLKP1Q107X0 134 aa2.98□□□□□ -1.93
PTCD3-207ENST00000467273 CASC2Q6XLA1 102 aa2.98□□□□□ -1.93
PTCD3-207ENST00000467273 SPANXA2-OT1Q8N9U9 137 aa2.98□□□□□ -1.93
PTCD3-207ENST00000467273 C14orf132Q9NPU4 83 aa2.98□□□□□ -1.93
PTCD3-207ENST00000467273 UBE2D4Q9Y2X8 147 aa2.98□□□□□ -1.93
PTCD3-207ENST00000467273 HCG22E2RYF7 251 aa2.97□□□□□ -1.93
PTCD3-207ENST00000467273 COX8AP10176 69 aa2.97□□□□□ -1.93
PTCD3-207ENST00000467273 RPS29P62273 56 aaKnown RBP2.97□□□□□ -1.93
PTCD3-207ENST00000467273 SPTSSBQ8NFR3 76 aa2.97□□□□□ -1.93
PTCD3-207ENST00000467273 CDC42SE1Q9NRR8 79 aa2.97□□□□□ -1.93
PTCD3-207ENST00000467273 A0A087WSZ3 146 aa2.96□□□□□ -1.94
PTCD3-207ENST00000467273 H3BQ85 93 aa2.96□□□□□ -1.94
PTCD3-207ENST00000467273 PPP1R17O96001 155 aa2.96□□□□□ -1.94
PTCD3-207ENST00000467273 FCER1GP30273 86 aa2.96□□□□□ -1.94
PTCD3-207ENST00000467273 KRTAP5-5Q701N2 237 aaPredicted RBP2.96□□□□□ -1.94
PTCD3-207ENST00000467273 MANBALQ9NQG1 85 aa2.96□□□□□ -1.94
PTCD3-207ENST00000467273 C11orf86A6NJI1 115 aa2.95□□□□□ -1.94
PTCD3-207ENST00000467273 C3orf79P0CE67 100 aa2.95□□□□□ -1.94
PTCD3-207ENST00000467273 FCGBPQ9Y6R7 5405 aaPredicted RBP2.94□□□□□ -1.94
PTCD3-207ENST00000467273 LINC00167Q96N53 147 aa2.94□□□□□ -1.94
PTCD3-207ENST00000467273 C20orf166-AS1Q96NR2 134 aa2.94□□□□□ -1.94
PTCD3-207ENST00000467273 PRO1854Q9UHT4 67 aa2.94□□□□□ -1.94
PTCD3-207ENST00000467273 C2orf82Q6UX34 121 aa2.93□□□□□ -1.94
PTCD3-207ENST00000467273 SSPOA2VEC9 5147 aa2.92□□□□□ -1.94
PTCD3-207ENST00000467273 FXYD6-FXYD2A0A087WZ82 144 aa2.92□□□□□ -1.94
PTCD3-207ENST00000467273 TRAV22A0A0B4J277 110 aa2.92□□□□□ -1.94
PTCD3-207ENST00000467273 BAALC-AS2P0C853 105 aa2.92□□□□□ -1.94
PTCD3-207ENST00000467273 MOBPQ13875 183 aa2.92□□□□□ -1.94
PTCD3-207ENST00000467273 COX6B2Q6YFQ2 88 aa2.92□□□□□ -1.94
PTCD3-207ENST00000467273 Q8IZM0 81 aa2.92□□□□□ -1.94
PTCD3-207ENST00000467273 USH2AO75445 5202 aa2.91□□□□□ -1.94
PTCD3-207ENST00000467273 F8VRH5 84 aa2.91□□□□□ -1.94
PTCD3-207ENST00000467273 MIR22HGQ0VDD5 57 aa2.91□□□□□ -1.94
PTCD3-207ENST00000467273 PCOTHQ58A44 107 aa2.91□□□□□ -1.94
PTCD3-207ENST00000467273 Q5W150 140 aa2.91□□□□□ -1.94
PTCD3-207ENST00000467273 LINC00846Q9NV44 126 aa2.91□□□□□ -1.94
PTCD3-207ENST00000467273 ERC2-IT1O76042 136 aa2.9□□□□□ -1.95
PTCD3-207ENST00000467273 P0C880 135 aa2.9□□□□□ -1.95
PTCD3-207ENST00000467273 Q5VV11 94 aa2.9□□□□□ -1.95
PTCD3-207ENST00000467273 TMEM254Q8TBM7 123 aa2.9□□□□□ -1.95
PTCD3-207ENST00000467273 SPRR4Q96PI1 79 aa2.9□□□□□ -1.95
PTCD3-207ENST00000467273 LIMD2Q9BT23 127 aa2.9□□□□□ -1.95
PTCD3-207ENST00000467273 A0A1B0GUT8 65 aa2.89□□□□□ -1.95
PTCD3-207ENST00000467273 COX6CP09669 75 aa2.89□□□□□ -1.95
PTCD3-207ENST00000467273 RPL39P62891 51 aaKnown RBP2.89□□□□□ -1.95
PTCD3-207ENST00000467273 PRLHP81277 87 aa2.89□□□□□ -1.95
PTCD3-207ENST00000467273 C20orf197Q8N268 126 aa2.89□□□□□ -1.95
PTCD3-207ENST00000467273 FLGP20930 4061 aaPredicted RBP2.89□□□□□ -1.95
PTCD3-207ENST00000467273 IGKV2-28A0A075B6P5 120 aa2.88□□□□□ -1.95
PTCD3-207ENST00000467273 A0A096LNJ9 63 aa2.88□□□□□ -1.95
PTCD3-207ENST00000467273 TEX49A0A1B0GTD5 131 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms